| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,373 | C→A | 6.8% | intergenic (‑169/‑136) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,373 | 0 | C→A | 6.8% | 31.2 ‑0.5 ‑1.9 | 234 | intergenic (‑169/‑136) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (8/8): ref base (123/95): total (131/103) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.15e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.36e-02 | ||||||||||
Only 100 of 261 total aligned reads displayed.
GGCTCTG.CCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.CCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGG > NC_014034/2249274‑2249472
|
ctctGCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..g < 1:4295982/101‑1 (MQ=255)
tctgcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gc < 2:2262889/96‑1 (MQ=255)
tctgcccc.cGTCCCGTGCCGCGACT.CTCCCGGGATATATGAAGCAAGAAGAA...GGGG..GCC.TTACATCTT.GCCGAAAATATCCCGGGGCGTGAA.TGGCGCA..Gc < 2:5020550/96‑1 (MQ=25)
ctgcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..Gcc > 1:3458951/5‑101 (MQ=255)
ctG.CCCTCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gcc < 2:2212381/101‑1 (MQ=255)
gcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag > 1:3994163/3‑101 (MQ=255)
gcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGAAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATACCGGGGGGGGAA.GGGCGCA..GCCag > 1:2491384/3‑101 (MQ=38)
ccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCagag > 1:817140/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 1:2274477/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 1:231295/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 1:3213276/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGAGAA.TGGCGCA..GCCAGAggggg > 2:1813618/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg < 1:392326/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc > 1:2415653/1‑101 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCa < 2:608220/101‑1 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GACAGAGGGGGGCa < 1:2728576/101‑1 (MQ=255)
ccgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAAC.CGGA..TGCATTTCATCTT.GCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggg > 1:4872835/9‑101 (MQ=21)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 1:3904232/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 2:4307761/101‑1 (MQ=255)
cgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTT.GCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAggggg > 2:2381758/8‑101 (MQ=18)
cgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTT.GCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAggggg > 2:1685360/8‑101 (MQ=21)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTT.GCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGc > 2:1143867/6‑101 (MQ=18)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTT.GCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGc < 2:902873/96‑1 (MQ=18)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.cg.c > 2:2661997/1‑101 (MQ=255)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.ccc < 1:2591059/101‑1 (MQ=255)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.ccc > 1:1052733/1‑101 (MQ=255)
ggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTT.GCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAg.cg.c < 2:3846146/101‑1 (MQ=17)
gACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cccccc < 1:2807368/101‑2 (MQ=255)
gACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cccccc < 1:4752675/101‑2 (MQ=255)
ccT.CCCCAAGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cccccct < 2:3823789/100‑3 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cccccctt < 1:4041099/101‑4 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGAGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.cccccctt > 2:1626094/1‑98 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.ccccccttc < 2:1645830/101‑5 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.ccccccttcg < 1:2215211/101‑6 (MQ=255)
ccccGGGATATTTGCGGCAAGATGAA...GGGGCATGA.TTTCATCTT.GCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG.CCCCC..tg > 1:3435718/1‑100 (MQ=0)
cccGGGATATTTGCGGCAAGATGAA...GGGGCATGA.TTTCATCTT.GCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG.CCCCC..tgc < 2:1204802/101‑3 (MQ=0)
gggATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCgcgggc < 1:654632/101‑1 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCgcgggc > 1:568043/1‑101 (MQ=255)
gggATATTTGAGGAAAGATGAG...GGGG..GTT.TTTCATCTT.GCCGAAAATATCCGGGGGGGTGAA.GGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCgcgggc < 1:3515391/101‑1 (MQ=21)
gATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCC..GCCAGAGGGGGGGAG.CGCCCCCC..TTCgccggcgc > 2:1464777/1‑100 (MQ=25)
gATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCgcgggcgg > 1:4569746/1‑101 (MQ=255)
atatTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGCGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGggcggc > 1:74012/1‑101 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGcc < 2:2757136/101‑1 (MQ=255)
atTTGCGGCAAGATGAA...GGGGCATGA.TTTCATCTT.GCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG.CCCCC..tgccccgccgg > 2:4122224/1‑91 (MQ=2)
atTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCcg > 2:1375132/1‑101 (MQ=255)
tttGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCcgc < 2:4880746/101‑1 (MQ=255)
tttGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCcgc > 1:4305555/1‑101 (MQ=255)
ttGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCcgcg > 1:4922108/1‑101 (MQ=255)
ttGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCcgcg > 2:1926736/1‑101 (MQ=255)
gagga...GGGG..GGC.TTTCATTTT.GGCAAAAATGCCCCGGGGGGGTAA.TGGGGGC..GCCCGGGGGGGGGCG.CC.CCCCCCTTTCGCGGGCGGCCGCGACGCGcgcc < 2:4236344/97‑1 (MQ=255)
aTGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGcgccg < 2:2697914/101‑1 (MQ=255)
tGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGcgccgc > 2:1777897/1‑101 (MQ=255)
gAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:540454/101‑1 (MQ=255)
gAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:4682148/101‑1 (MQ=255)
gAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCa > 2:515019/1‑101 (MQ=255)
ta...GGGG..GGG.CTTCATATTCCCCGAAAATAGCGTGGGGGGTAAA.CGGCGCA..GCCAGGGGGGGGCGGCCC.CCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCa < 1:3078535/100‑1 (MQ=255)
aa...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:1052694/1‑101 (MQ=255)
aa...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 1:1143316/1‑101 (MQ=255)
aa...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 1:2076968/1‑101 (MQ=255)
aa...GGGC..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:3693541/1‑101 (MQ=255)
a...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAAc > 2:4074801/1‑101 (MQ=255)
a...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:2403842/101‑1 (MQ=255)
gggg..ggC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 2:349745/101‑1 (MQ=255)
gggg..ggC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa > 2:3529936/1‑101 (MQ=255)
gggg..ggC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:2124760/101‑1 (MQ=255)
gggg..ggC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:365365/101‑1 (MQ=255)
ggg..ggC.TTTCATCTT.GCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAg > 1:2062827/1‑101 (MQ=255)
ttCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGc < 2:4382807/101‑1 (MQ=255)
tCATCTT.GCCGAAAATATCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc < 2:1296295/101‑1 (MQ=255)
tCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc < 2:2483346/101‑1 (MQ=255)
tCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCt < 1:2859550/101‑1 (MQ=255)
cTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 1:4263215/1‑101 (MQ=255)
cTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 1:4349614/1‑101 (MQ=255)
tggCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 2:329169/99‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 1:3846955/101‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 2:2778809/101‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 1:4510971/101‑1 (MQ=255)
ggAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAT.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCa < 1:2340286/100‑1 (MQ=255)
cGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCa > 1:2150742/1‑101 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt > 1:1794654/1‑101 (MQ=255)
aaaaGATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt < 2:4846047/101‑1 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTCTGTCATTc > 2:3328181/1‑101 (MQ=255)
gggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc < 2:1009809/100‑1 (MQ=255)
cGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc > 2:2894041/1‑101 (MQ=255)
ggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc < 2:2439222/101‑1 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 1:702558/1‑101 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc < 2:3985285/101‑1 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt < 2:3054663/101‑1 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 2:2503832/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 2:4470104/1‑101 (MQ=255)
ggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TGCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg < 1:4829377/101‑1 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGACCCTTTGTCATTCTGTCGCACCCATGTCa > 2:824026/1‑101 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa > 1:1413744/1‑101 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa > 1:4413198/1‑101 (MQ=255)
ggCGCA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg < 1:4976029/101‑1 (MQ=255)
cgcA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCt < 1:1560074/101‑1 (MQ=255)
gcA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTg < 1:2936855/101‑1 (MQ=255)
cA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTgg > 2:3420182/1‑101 (MQ=255)
cA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTgg < 2:3100241/101‑1 (MQ=255)
cA..GCCAGAGGGGGGCAG.CGCCCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTgg > 1:3135105/1‑101 (MQ=255)
|
GGCTCTG.CCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG.CCCCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGG > NC_014034/2249274‑2249472
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|