| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,379 | G→A | 2.5% | intergenic (‑175/‑130) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,379 | 0 | G→A | 2.5% | 7.3 0.0 ‑0.4 | 237 | intergenic (‑175/‑130) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (4/2): ref base (134/97): total (138/99) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.85e-01 | ||||||||||
Only 100 of 268 total aligned reads displayed.
TGCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATC > NC_014034/2249279‑2249479
|
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag < 2:4133381/99‑1 (MQ=255)
ccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCagag > 1:817140/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 1:2776911/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 1:2274477/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGTTATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 2:3670845/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 1:3213276/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGAGAA.TGGCGCA..GCCAGAggggg > 2:1813618/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGAGAA.TGGCGCA..GCCAGAggggg > 2:1403680/1‑101 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 1:4980737/101‑1 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCa < 2:3319237/101‑1 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GACAGAGGGGGGCa < 1:2728576/101‑1 (MQ=255)
ccgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAAC.CGGA..TGCATTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggg > 1:4872835/9‑101 (MQ=21)
cgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAggggg > 2:1685360/8‑101 (MQ=21)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.c > 1:2566735/1‑101 (MQ=255)
tGCCTGGACT.CCCCCGGGATATTTGAGGCAAGATCAG...GGGG..GGT.TTTCATCTTTCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.cg < 1:2240441/101‑1 (MQ=37)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGc > 2:1143867/6‑101 (MQ=18)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGc < 2:902873/96‑1 (MQ=18)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.cg..c > 2:2661997/1‑101 (MQ=255)
gcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAg.c < 1:2459501/99‑1 (MQ=18)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..ccc > 1:1052733/1‑101 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cccc > 1:4451631/1‑101 (MQ=255)
ggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAGTATCCCGGGGGGGGAA.TGGCGAA..GCCAGAGGGGGGccgggc > 1:2166884/1‑96 (MQ=17)
gactccccccGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAG.CG..cc < 1:4232038/96‑1 (MQ=17)
aCT.CCCCAGGGTTATTTGAGGCAAGATGTA...GGGG..GGC.TTTCATCTTGGCGAAAATTTGCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cccccct < 2:4101922/101‑3 (MQ=25)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGAGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cccccctt > 2:1626094/1‑98 (MQ=255)
ccccGGGATATTTGCGGCAAGATGAA...GGGGCATGA.TTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG..CCCCC.tg > 1:3435718/1‑100 (MQ=0)
ccccGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTcgc < 2:4298079/101‑1 (MQ=255)
cccGGGATATTTGCGGCAAGATGAA...GGGGCATGA.TTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG..CCCCC.tgc < 2:1204802/101‑3 (MQ=0)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGA.TTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG..CCCCC.tgccc > 2:3195667/1‑97 (MQ=2)
gggATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCgcgggc < 1:654632/101‑1 (MQ=255)
gggATATTTGAGGAAAGATGAG...GGGG..GTT.TTTCATCTTGCCGAAAATATCCGGGGGGGTGAA.GGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCgcgggc < 1:3515391/101‑1 (MQ=21)
ggATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCgcggggg > 1:3003233/1‑99 (MQ=255)
gATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCC..GCCAGAGGGGGGGAG.CGC.CCCCC.TTCgccggcgc > 2:1464777/1‑100 (MQ=25)
gATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCgcgggcgg > 1:4569746/1‑101 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGcc < 2:2757136/101‑1 (MQ=255)
tttGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCcgc > 1:4305555/1‑101 (MQ=255)
tttGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCcgc < 2:4880746/101‑1 (MQ=255)
tGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGa < 1:3864265/101‑1 (MQ=255)
tGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGCGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGGGGGCGGCCGCGa > 1:477324/1‑101 (MQ=37)
cAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGAcgcgc < 2:341805/101‑1 (MQ=255)
gATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..CCCCCATTCGCGGGCGGCCGCGACGCGcgcc > 2:225834/1‑101 (MQ=255)
aTGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGcgccg < 2:2697914/101‑1 (MQ=255)
aTGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGcgccg > 1:2085237/1‑101 (MQ=255)
tGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGcgccgc > 2:1777897/1‑101 (MQ=255)
gAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:540454/101‑1 (MQ=255)
gAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCa > 2:515019/1‑101 (MQ=255)
gAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCa > 1:1613799/1‑101 (MQ=255)
aa...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGGCGCGCGCCGCaa > 2:1923001/1‑101 (MQ=255)
aa...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:1052694/1‑101 (MQ=255)
aa...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 1:1143316/1‑101 (MQ=255)
a...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:2403842/101‑1 (MQ=255)
a...GGGG..GGC.TTTCATCTTGCCAAAAATGTCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:396183/101‑1 (MQ=37)
gggg..ggC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:2124760/101‑1 (MQ=255)
c.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGt < 2:3826913/101‑1 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 1:2365250/1‑101 (MQ=255)
tCATCTTGCCGAAAATATCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc < 2:1296295/101‑1 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc < 2:2483346/101‑1 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 2:5009555/1‑101 (MQ=255)
aTCTTGCCGAAAATATCCCGGGGGGTGAA.GGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcccc < 1:3981074/101‑1 (MQ=255)
tCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCt < 1:2859550/101‑1 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 1:4349614/1‑101 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 2:4573046/101‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 1:4510971/101‑1 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt > 1:3784659/1‑101 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc > 1:4295762/1‑101 (MQ=255)
aaTTTCCGGGGGGGTGAA.TGGCGCA..GCCAAAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGCGCCCCTTTGTTATTCt > 2:165061/1‑101 (MQ=37)
tatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCCCC.TTCGCGGGCGCCCGCACCCCCGGCCGCAAAAGGCCGGGCCCCTTGTTCTTTCtt > 2:588032/1‑100 (MQ=12)
tatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGt > 2:3526695/1‑101 (MQ=255)
atCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc < 1:747293/101‑1 (MQ=255)
atCCCGGGGGATGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc > 2:432316/1‑101 (MQ=255)
acccgggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc < 1:1874073/96‑1 (MQ=255)
gggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc < 2:1009809/100‑1 (MQ=255)
cGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc > 2:2894041/1‑101 (MQ=255)
ggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc < 2:2439222/101‑1 (MQ=255)
ggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc > 2:3737446/1‑101 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 1:702558/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTGGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 1:1550806/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 1:3919276/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 1:4000052/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 2:2503832/1‑101 (MQ=255)
ggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TGCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg < 1:4829377/101‑1 (MQ=255)
ggAA.TGGCGCA..GCCAGAGGGGGGCAGCCC..CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc < 2:3478431/100‑1 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGACCCTTTGTCATTCTGTCGCACCCATGTCa > 2:824026/1‑101 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt > 1:4922593/1‑101 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGCCATTCTGTCGCACCCATGTCAt > 1:2320318/1‑101 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa > 2:2324904/1‑101 (MQ=255)
acgccgcA..GCCAGAGGGGGGCAG.CGC.CCCCC.TCCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTCCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 2:4719794/97‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa > 2:2808364/1‑101 (MQ=255)
gcA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTg < 1:2936855/101‑1 (MQ=255)
cA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTgg < 2:3100241/101‑1 (MQ=255)
cA..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTgg > 1:3135105/1‑101 (MQ=255)
a..GCCAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGc > 2:4630846/1‑101 (MQ=255)
ccAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCg < 1:58111/101‑1 (MQ=255)
ccAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCg > 2:4386321/1‑101 (MQ=255)
cAGAGGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGc > 1:2070822/1‑101 (MQ=255)
cAGAGGGGGCCGGCCC..CCCCC.TCCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGc < 2:2003903/101‑1 (MQ=255)
agagGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 2:4053254/1‑101 (MQ=255)
agagGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 2:3004394/1‑101 (MQ=255)
gagGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAt > 1:4947990/1‑101 (MQ=255)
gagGGGGGCAG.CGC.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAt > 1:3453822/1‑101 (MQ=255)
|
TGCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATC > NC_014034/2249279‑2249479
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|