| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,380 | A→G | 3.0% | intergenic (‑176/‑129) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,380 | 0 | A→G | 3.0% | 5.6 0.0 0.0 | 236 | intergenic (‑176/‑129) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (5/3): ref base (131/96): total (137/99) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 264 total aligned reads displayed.
CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.CCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATC > NC_014034/2249281‑2249479
|
ccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCagag > 1:817140/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGTTATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 2:3670845/1‑101 (MQ=255)
cccgtGCCGGGACT.CCCCGGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCGCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 2:107116/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 1:4980737/101‑1 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCa < 2:608220/101‑1 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCa > 2:3711690/1‑101 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCa < 2:3319237/101‑1 (MQ=255)
ccgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAAC.CGGA..TGCATTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggg > 1:4872835/9‑101 (MQ=21)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 1:3498506/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 1:3904232/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg > 1:396248/1‑101 (MQ=255)
cgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAggggg > 2:2381758/8‑101 (MQ=18)
tGCCTGGACT.CCCCCGGGATATTTGAGGCAAGATCAG...GGGG..GGT.TTTCATCTTTCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAgcg < 1:2240441/101‑1 (MQ=37)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGc < 2:902873/96‑1 (MQ=18)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAgcg.c > 2:2661997/1‑101 (MQ=255)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.GGGCGCA..GCCAGAGGGGGGCAgag.c > 2:1737242/1‑101 (MQ=255)
gcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAgc < 1:2286656/99‑1 (MQ=18)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc < 1:2591059/101‑1 (MQ=255)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc > 1:1052733/1‑101 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc.c > 1:4451631/1‑101 (MQ=255)
cggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAgcg < 1:276066/100‑1 (MQ=18)
gactccccccGGGATATTTGCAGCAAGATGAAACCGGAT..GCC.TTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAGCG.cc < 1:4232038/96‑1 (MQ=17)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc.ccct > 1:2140057/1‑99 (MQ=255)
aCT.CCCCAGGGTTATTTGAGGCAAGATGTA...GGGG..GGC.TTTCATCTTGGCGAAAATTTGCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc.ccct < 2:4101922/101‑3 (MQ=25)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc.cccttc < 2:1645830/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc.cccttc < 1:2181228/101‑5 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.ccc.cccttcg < 1:2330065/101‑6 (MQ=255)
ccccGGGATATTTGCGGCAAGGTGAA...GGGGCATGA.TTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CCC.CC.tg > 1:2863925/1‑100 (MQ=2)
ccccGGGATATTTGCGGCAAGATGAA...GGGGCATGA.TTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CCC.CC.tg > 1:3435718/1‑100 (MQ=0)
ccccGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTcgc < 2:4298079/101‑1 (MQ=255)
cccGGGATATTTGCGGCAAGATGAA...GGGGCATGA.TTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CCC.CC.tgc < 2:1204802/101‑3 (MQ=0)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGA.TTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAGCG.CCC.CC.tgccc > 2:3195667/1‑97 (MQ=2)
gggATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCgcgggc < 1:654632/101‑1 (MQ=255)
gATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCgcgggcgg > 1:4569746/1‑101 (MQ=255)
atatTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGCGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGggcggc > 1:74012/1‑101 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGcc < 2:2757136/101‑1 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCcg > 2:1375132/1‑101 (MQ=255)
tttGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCcgc < 2:4880746/101‑1 (MQ=255)
tttGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCcgc > 1:4305555/1‑101 (MQ=255)
ttGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCcgcg > 1:4922108/1‑101 (MQ=255)
tGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGa < 1:3864265/101‑1 (MQ=255)
tGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGCGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGGGGGCGGCCGCGa > 1:477324/1‑101 (MQ=37)
gAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGAc > 2:4379902/1‑101 (MQ=255)
gAGGAAAGATGAA...GGGG..GGC.TTTCATTTTGCCGAAAATTTCGGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGAc < 2:1789784/101‑1 (MQ=37)
aggtaggaggAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGAcg < 2:1582857/92‑1 (MQ=25)
ggCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGAcgc < 2:3458686/101‑1 (MQ=255)
gCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGAcgcg < 2:4658103/101‑1 (MQ=255)
cAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGAcgcgc < 2:341805/101‑1 (MQ=255)
cAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.CCCACC.TTCGCGGGCGGCCGCGAcgcgc > 2:1280495/1‑101 (MQ=255)
gATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.CCC.CCATTCGCGGGCGGCCGCGACGCGcgcc > 2:225834/1‑101 (MQ=255)
aTGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGcgccg > 1:2085237/1‑101 (MQ=255)
gAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCa > 2:515019/1‑101 (MQ=255)
gAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:540454/101‑1 (MQ=255)
aa...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCGGCaa > 1:2565231/1‑101 (MQ=255)
aa...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:249070/1‑101 (MQ=255)
aa...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 1:1143316/1‑101 (MQ=255)
a...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAAc > 2:1840746/1‑101 (MQ=255)
a...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:2403842/101‑1 (MQ=255)
a...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 1:2855191/101‑1 (MQ=255)
a...GGGG..GGC.TTTCATCTTGCCAAAAATGTCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:396183/101‑1 (MQ=37)
gggg..ggC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 2:2897380/101‑1 (MQ=255)
gC.TTTCATCATGCCGAAAATATCCCGGGGGGTGAA.TGGCCCA..GCCAGGGGGGGGAAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGCCg > 2:1677257/1‑101 (MQ=37)
c.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGt < 2:3826913/101‑1 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 1:3109615/101‑1 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 1:2365250/1‑101 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGCTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 2:398831/1‑101 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 1:3201183/1‑101 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 2:1030871/1‑101 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 1:2075832/1‑101 (MQ=255)
cATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc > 1:2946206/1‑101 (MQ=255)
tCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCt > 2:2699450/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 1:4349614/1‑101 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 2:4573046/101‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 1:4510971/101‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 2:4216837/101‑1 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt > 2:5019650/1‑101 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc > 1:4295762/1‑101 (MQ=255)
tatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGt > 2:3526695/1‑101 (MQ=255)
acccgggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc < 1:1874073/96‑1 (MQ=255)
gggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc < 2:1009809/100‑1 (MQ=255)
ggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc < 2:2439222/101‑1 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 2:1458945/1‑101 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 1:702558/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTGGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 1:1550806/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 2:2503832/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 1:4000052/1‑101 (MQ=255)
ggTGAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TGCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg < 1:4829377/101‑1 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa > 2:2122268/1‑101 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa > 1:3730874/1‑101 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGACCCTTTGTCATTCTGTCGCACCCATGTCa > 2:824026/1‑101 (MQ=255)
acgccgcA..GCCAGAGGGGGGCAGCGCCCC.CC.TCCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTCCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 2:4719794/97‑1 (MQ=255)
tGGCGCA..GCGGGGGGGGGGCGGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 1:579683/101‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa > 2:2808364/1‑101 (MQ=255)
cA..GCCAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTgg < 2:3100241/101‑1 (MQ=255)
ccAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCg > 2:4386321/1‑101 (MQ=255)
ccAGAGGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCg > 2:1941327/1‑101 (MQ=255)
agagGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 2:3004394/1‑101 (MQ=255)
gagGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAt > 1:4947990/1‑101 (MQ=255)
gagGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAt > 1:3453822/1‑101 (MQ=255)
gagGGGGGCAGCGCCCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAt > 1:1576532/1‑101 (MQ=255)
|
CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGC.TTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCG.CCC.CC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATC > NC_014034/2249281‑2249479
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|