| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,381 | G→A | 2.7% | intergenic (‑177/‑128) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,381 | 0 | G→A | 2.7% | 6.6 ‑0.4 ‑0.1 | 222 | intergenic (‑177/‑128) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (4/2): ref base (118/98): total (122/100) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.93e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.66e-01 | ||||||||||
Only 100 of 270 total aligned reads displayed.
CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCG > NC_014034/2249281‑2249480
|
ccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCagag > 1:817140/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 1:2776911/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg < 2:4118106/101‑1 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg < 1:392326/101‑1 (MQ=255)
atctgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg < 1:2593148/97‑1 (MQ=255)
cccgtGCCGGGACT.CCCCGGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCGCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc < 2:107116/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGc > 1:2415653/1‑101 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGCGAA.TGGCGCA..GCCAGAGGGGGGc > 2:2443535/1‑101 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCa > 2:3711690/1‑101 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 1:3312132/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 1:3498506/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 1:3904232/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 1:675225/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 2:4307761/101‑1 (MQ=255)
cgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTT.GCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAggggg > 2:1685360/8‑101 (MQ=21)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTT.GCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGc < 2:902873/96‑1 (MQ=18)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.GGGCGCA..GCCAGAGGGGGGCAg.ag..c > 2:1737242/1‑101 (MQ=255)
gcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTT.GCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAg.c < 1:2286656/99‑1 (MQ=18)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..ccc > 1:1052733/1‑101 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..ccc.c > 1:4451631/1‑101 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..ccc.c > 1:929201/1‑101 (MQ=255)
gactccccccGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTT.GCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAG.CG..cc < 1:4232038/96‑1 (MQ=17)
gACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..ccc.ccc < 1:4752675/101‑2 (MQ=255)
gACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..ccc.ccc < 2:270951/101‑2 (MQ=255)
ccT.CCCCAAGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..ccc.ccct < 2:3823789/100‑3 (MQ=255)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..ccc.ccct > 1:485248/1‑99 (MQ=255)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..ccc.ccct > 1:2140057/1‑99 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..ccc.cccttc < 1:2181228/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..ccc.cccttc < 2:1645830/101‑5 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..ccc.cccttcg < 1:2330065/101‑6 (MQ=255)
cccGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTT.GCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG..CCC.CC..tgc < 2:1204802/101‑3 (MQ=0)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCgcgggc < 1:654632/101‑1 (MQ=255)
gATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCC..GCCAGAGGGGGGGAG.CGC.CCC.CC..TTCgccggcgc > 2:1464777/1‑100 (MQ=25)
atatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGggcggc > 1:2251467/1‑101 (MQ=255)
atatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGCGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGggcggc > 1:74012/1‑101 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCcg > 2:1375132/1‑101 (MQ=255)
tttGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCcgc > 1:4305555/1‑101 (MQ=255)
ttGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCcgcg > 2:535086/1‑101 (MQ=255)
ttGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCcgcg > 2:508930/1‑101 (MQ=255)
ttGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCcgcg > 1:4922108/1‑101 (MQ=255)
gAGGAAAGATGAA...GGGG..GGCTTTCATTTT.GCCGAAAATTTCGGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGAc < 2:1789784/101‑1 (MQ=37)
aggtaggaggAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGAcg < 2:1582857/92‑1 (MQ=25)
cAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..CCCACC..TTCGCGGGCGGCCGCGAcgcgc > 2:1280495/1‑101 (MQ=255)
aaGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGAcgcgcg > 2:3936860/1‑101 (MQ=255)
gagga...GGGG..GGCTTTCATTTT.GGCAAAAATGCCCCGGGGGGGTAA.TGGGGGC..GCCCGGGGGGGGGCG.CC..CCC.CCCTTTCGCGGGCGGCCGCGACGCGcgcc < 2:4236344/97‑1 (MQ=255)
gAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCa > 1:3437886/1‑101 (MQ=255)
gAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:4682148/101‑1 (MQ=255)
gAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCa > 2:3637792/1‑101 (MQ=255)
gAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCa > 2:2560414/1‑101 (MQ=255)
gAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCa > 2:2673307/1‑101 (MQ=255)
gAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCa > 1:1613799/1‑101 (MQ=255)
ta...GGGG..GGGCTTCATATTCCCCGAAAATAGCGTGGGGGGTAAA.CGGCGCA..GCCAGGGGGGGGCGGCCC..CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCa < 1:3078535/100‑1 (MQ=255)
aa...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGGCGCGCGCCGCaa > 2:1923001/1‑101 (MQ=255)
aa...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCGGCaa > 1:2565231/1‑101 (MQ=255)
aa...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 1:2076968/1‑101 (MQ=255)
aa...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 1:1143316/1‑101 (MQ=255)
a...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 1:2855191/101‑1 (MQ=255)
gggg..ggCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 2:349745/101‑1 (MQ=255)
gggg..ggCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:365365/101‑1 (MQ=255)
gggg..ggCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:4806444/101‑1 (MQ=255)
ggg..ggCTTTCATCTT.GCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAg > 1:2062827/1‑101 (MQ=255)
tttCATCTT.GCCGAAAATATCCCGGGGGCTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 2:398831/1‑101 (MQ=255)
ttCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGc < 2:4382807/101‑1 (MQ=255)
tCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 2:5009555/1‑101 (MQ=255)
tCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 2:1030871/1‑101 (MQ=255)
tCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 1:3201183/1‑101 (MQ=255)
cTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt < 2:3394470/101‑1 (MQ=255)
cTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 1:4349614/1‑101 (MQ=255)
tt.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 2:2997216/101‑1 (MQ=255)
tggCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 2:329169/99‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 1:3846955/101‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 2:2778809/101‑1 (MQ=255)
aaaaGATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt < 2:4846047/101‑1 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc > 1:4295762/1‑101 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc < 2:308107/101‑1 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GACAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc < 2:2399495/101‑1 (MQ=255)
tatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGCCCCC.CC..TTCGCGGGCGCCCGCACCCCCGGCCGCAAAAGGCCGGGCCCCTTGTTCTTTCtt > 2:588032/1‑100 (MQ=12)
atCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc > 2:2879455/1‑101 (MQ=255)
ccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAGCCC..CCC.CC..TTCGCGGGCGGCCGCGACCCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCa < 2:817038/101‑1 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTGGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 1:1550806/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 2:4470104/1‑101 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 1:4000052/1‑101 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa > 2:2122268/1‑101 (MQ=255)
aa.TGGCGCA..GCCAGGGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 1:4564322/101‑1 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 2:2274322/101‑1 (MQ=255)
a.TGGCGAA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGGCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 2:2491210/101‑1 (MQ=255)
tGGCGCA..GCGGGGGGGGGGCGG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 1:579683/101‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 2:2415479/101‑1 (MQ=255)
ggCGCA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg < 1:4976029/101‑1 (MQ=255)
gcA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTg < 1:2936855/101‑1 (MQ=255)
cA..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTgg > 2:3420182/1‑101 (MQ=255)
cccgcaaggggggggCTG.CCC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTg < 1:1813751/92‑1 (MQ=255)
a..GCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGc > 2:4630846/1‑101 (MQ=255)
gggcggagggggggCCG.CTC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTgg < 2:88663/93‑1 (MQ=255)
gCCAGAGGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGcc > 2:3168218/1‑101 (MQ=255)
cAGAGGGGGCCGGCCC..CCC.CC..TCCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGc < 2:2003903/101‑1 (MQ=255)
agagGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 2:4053254/1‑101 (MQ=255)
gagGGGGGCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAt > 1:4947990/1‑101 (MQ=255)
ggggggCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCg < 1:4470423/101‑1 (MQ=255)
ggggggCAG.CGC.CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCg > 1:2089694/1‑101 (MQ=255)
|
CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTT.GCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..CCC.CC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCG > NC_014034/2249281‑2249480
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|