| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 243,610 | C→T | 1.5% | intergenic (+39/+81) | mogA → / ← ubiG | molybdopterin biosynthesis mog protein/3‑demethylubiquinone‑9 3‑O‑methyltransferase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 243,610 | 0 | C→T | 1.5% | 2.6 ‑2.9 ‑0.1 | 266 | intergenic (+39/+81) | mogA/ubiG | molybdopterin biosynthesis mog protein/3‑demethylubiquinone‑9 3‑O‑methyltransferase |
| Reads supporting (aligned to +/- strand): new base (4/0): ref base (127/135): total (131/135) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.75e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.76e-01 | ||||||||||
Only 100 of 289 total aligned reads displayed.
GGGCCGGGCATATCGACACCGATCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCG > NC_014034/243510‑243709
|
gggCCGGGCATATCGACACCGATCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCAccccc < 2:1797519/101‑1 (MQ=255)
gCCGGGCATATCGACACCGATCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCgg < 2:3527955/101‑1 (MQ=255)
cGGGCATATCGACACCGATCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGATGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGa > 1:4377664/1‑101 (MQ=255)
ggCATATCGACACCGATCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGata > 1:3135112/1‑101 (MQ=255)
tatCGACATCGATCCGGCGAAAATCGCGGCGTTTCGACCGAAGACGAAATAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGGTATTTg < 1:2839372/101‑1 (MQ=38)
tatCGACACCGATCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTg < 1:3978514/101‑1 (MQ=255)
tatCGACACCGATCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTg < 1:1394120/101‑1 (MQ=255)
tatCGACACCGATCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTg < 1:454005/101‑1 (MQ=255)
cGACACCGATCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAgg < 1:1497070/101‑1 (MQ=255)
cGACACAGATCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAgg < 1:865377/101‑1 (MQ=255)
cacCGATCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCaa > 1:2774167/1‑101 (MQ=255)
acCGATCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAg < 1:1819610/101‑1 (MQ=255)
gATCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.a > 2:548318/1‑101 (MQ=255)
gATCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.a < 2:2206245/101‑1 (MQ=255)
aTCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.aa < 1:3577018/101‑1 (MQ=255)
tCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.aaa < 1:21805/101‑1 (MQ=255)
ccGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.g > 1:3242163/1‑101 (MQ=255)
ggCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGa > 2:1479240/1‑101 (MQ=255)
gCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAg > 1:3895310/1‑101 (MQ=255)
aaaTCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTg < 1:2528061/101‑1 (MQ=255)
aaTCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGt < 1:5053053/101‑1 (MQ=255)
aaTCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGt > 2:4662980/1‑101 (MQ=255)
aaTCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCAACCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGt > 2:3627691/1‑101 (MQ=255)
aTCGCGGTGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGtt < 2:268250/101‑1 (MQ=255)
aTCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCGCCCCCGGGATAGTTGAGGCAAGAT.AAA.GGAGCCTGtt < 2:158720/101‑1 (MQ=255)
aTCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGtt < 1:1221650/101‑1 (MQ=255)
aTCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGtt < 2:4973271/101‑1 (MQ=255)
tCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGttt < 1:1039544/101‑1 (MQ=255)
cgcgGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCGCTC.TGGC..TTCGCC.ATTCACACCCCGGATATTTGAGGCAAGAT.AAA.GGAGCCTGtttt > 1:4322195/1‑101 (MQ=255)
cgcgGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGtttt < 1:1057115/101‑1 (MQ=255)
cggcgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTAt < 2:4919958/101‑1 (MQ=255)
cggcgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTAt < 2:2374963/101‑1 (MQ=255)
cggcgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTAt < 2:1132647/101‑1 (MQ=255)
cggcgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTAt < 1:4935869/101‑1 (MQ=255)
ggcgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATc < 2:634534/101‑1 (MQ=255)
ggcgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATc < 2:4270120/101‑1 (MQ=255)
gcgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCt < 1:4144229/101‑1 (MQ=255)
gTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTg > 2:3226546/1‑101 (MQ=255)
gTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTg > 2:2891589/1‑101 (MQ=255)
tttCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGc < 1:3417905/101‑1 (MQ=255)
cGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.AGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTc < 1:3511076/101‑1 (MQ=255)
gCCCGAAGACGAAGTAAAAGGGGGCGCTCCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCa < 1:3847225/101‑1 (MQ=255)
cccGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCaa < 2:3206193/101‑1 (MQ=255)
ccGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCaaa < 1:240511/101‑1 (MQ=255)
cGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.t < 2:3426508/101‑1 (MQ=255)
gAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.Tg > 2:3575222/1‑101 (MQ=255)
aaGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGt > 1:2284258/1‑101 (MQ=255)
aaGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGt > 1:4893149/1‑101 (MQ=255)
aaGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGt > 1:4068812/1‑101 (MQ=255)
gACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTcc < 1:1914412/101‑1 (MQ=255)
gACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTcc < 2:487527/101‑1 (MQ=255)
cGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCg < 2:3297187/101‑1 (MQ=255)
gAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCgg < 1:4630242/101‑1 (MQ=255)
aaGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCggg > 1:3810552/1‑101 (MQ=255)
aGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCgggg < 1:306068/101‑1 (MQ=255)
tAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGc > 2:4353821/1‑101 (MQ=255)
gggcaGGGGGCGCTGCCCCCTCTTGGCCTTTGGCCAATTCACCCCTGGGATATTTCGGGCAAGATGAAA.TCATGCCCCTTCATCTTGCCGCAAA.TATCCCg > 1:3647499/5‑101 (MQ=0)
gggcaGGGGGCGCTGCCCCCTCTTGGCCTTTGGCCAATTCACCCCTGGGATATTTCGGGCAAGATGAAA.TCATGCCCCTTCATCTTGCCGCAAA.TATCCCg > 2:2059290/5‑101 (MQ=0)
aaaaGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGcc < 2:4377347/101‑1 (MQ=255)
aaaaGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGcc > 2:1407155/1‑101 (MQ=255)
gggggCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTggg > 1:1192276/1‑101 (MQ=255)
ggggCAATGCCCCGTC.TGGC..TTCGCT.ATTCTTCCCGGGGGTATTTGAGGCAGGAT.AAA.GGAGGCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTgggg < 1:419654/101‑1 (MQ=21)
gggCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTggggg < 2:3374492/101‑1 (MQ=255)
gggCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTggggg > 1:1861488/1‑101 (MQ=255)
ggCGCTGCCCCCTCTTGGCCTTTGGCCAATTCACCCCTGGGATATTTCGGGCAAGATGAAA.TCATGCCCCTTCATCTTGCCGCAAA.TATCCCggggggagc > 2:1429211/1‑97 (MQ=2)
gcTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAgc > 2:3705955/1‑101 (MQ=255)
gcTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAgc > 2:2844657/1‑101 (MQ=255)
gCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGcc > 2:2974169/1‑101 (MQ=255)
cccccTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGccc > 2:3842010/1‑101 (MQ=255)
ccccTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGcccc > 1:907412/1‑101 (MQ=255)
ccTC.TGGC..TCCGCC.ATTCCCCCCGGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAT.TGCCCCGGGGGCCTGGGGGCAGCGCCCCCa < 2:891065/101‑1 (MQ=38)
tc.tGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGc < 2:398116/101‑1 (MQ=255)
c.tGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGcc > 2:2288448/1‑101 (MQ=255)
tGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGGAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCt > 2:4181296/1‑101 (MQ=255)
ggC..TTCGCC.ATTCCCCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCtt < 1:1570754/101‑1 (MQ=255)
ggC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCtt < 2:2435210/101‑1 (MQ=255)
ggC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCtt > 2:737650/1‑101 (MQ=255)
ggC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCtt > 1:2083339/1‑101 (MQ=255)
gC..TTCGCC.ATTCCCCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTa < 2:1261246/101‑1 (MQ=255)
gC..TTCCCC.CTTCCCCCCCGGGGTTTTTGGGGGAAAAA.AAAGGGAGCTTGTTTT.TTTTGCCCCAAAGTGCCCGGGGGGCCTGGGGGCAGCGCCCCCAGCCtt < 1:1751980/101‑1 (MQ=255)
cGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGt > 1:257721/1‑101 (MQ=255)
gCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGtt > 1:1672559/1‑101 (MQ=255)
gCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGtt > 1:2449926/1‑101 (MQ=255)
c.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTc > 2:3786972/1‑101 (MQ=255)
c.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTc > 2:1651171/1‑101 (MQ=255)
c.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTc > 2:4588565/1‑101 (MQ=255)
aTTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCa > 2:4791420/1‑101 (MQ=255)
aTTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCa > 1:3333716/1‑101 (MQ=255)
aTTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCa < 1:607476/101‑1 (MQ=255)
aTTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCa < 1:291215/101‑1 (MQ=255)
ttCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCAc > 2:2744844/1‑101 (MQ=255)
tCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGACTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACg > 1:3372880/1‑101 (MQ=255)
ccccccgGGGATATTTAGGGAAAGAA.AAG.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGc < 1:4410877/99‑1 (MQ=25)
cACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGc > 1:4262442/1‑101 (MQ=255)
aCCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGAGTTTCACGCa > 2:2552207/1‑101 (MQ=255)
ccccGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAgg < 2:4068509/101‑1 (MQ=255)
ccccGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAgg < 2:3895018/101‑1 (MQ=255)
cccGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAggc < 1:5007767/101‑1 (MQ=255)
ccGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAggcg > 2:3106548/1‑101 (MQ=255)
ccGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAggcg < 1:4016853/101‑1 (MQ=255)
|
GGGCCGGGCATATCGACACCGATCCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCCCCTC.TGGC..TTCGCC.ATTCACCCCCGGGATATTTGAGGCAAGAT.AAA.GGAGCCTGTTTTATCTTGCCTCAAA.TGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCG > NC_014034/243510‑243709
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 28 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|