| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 243,633 | G→T | 1.3% | intergenic (+62/+58) | mogA → / ← ubiG | molybdopterin biosynthesis mog protein/3‑demethylubiquinone‑9 3‑O‑methyltransferase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 243,633 | 0 | G→T | 1.3% | 2.1 ‑2.0 ‑0.1 | 298 | intergenic (+62/+58) | mogA/ubiG | molybdopterin biosynthesis mog protein/3‑demethylubiquinone‑9 3‑O‑methyltransferase |
| Reads supporting (aligned to +/- strand): new base (4/0): ref base (169/125): total (173/125) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.42e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.96e-01 | ||||||||||
Only 100 of 325 total aligned reads displayed.
CCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGTTCACGCTGAGATCG > NC_014034/243533‑243733
|
gCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAg > 1:3895310/1‑101 (MQ=255)
cGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGc < 2:3745695/101‑1 (MQ=255)
gAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGcc < 1:3578158/101‑1 (MQ=255)
aaaaTCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCt > 1:171164/1‑101 (MQ=255)
aaTCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGt < 1:5053053/101‑1 (MQ=255)
aTCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGtt < 1:1221650/101‑1 (MQ=255)
cgcgGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.GCTC.TGG.C..TTC.GCC.A..TTCACACCCCGGATATTTGAGGCAAGAT.AAAGGAGCCTGtttt > 1:4322195/1‑101 (MQ=255)
cgcgGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGtttt < 1:1057115/101‑1 (MQ=255)
cgcgGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGtttt < 1:312415/101‑1 (MQ=255)
cgcgGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGtttt < 1:2025351/101‑1 (MQ=255)
cggcgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTAt < 2:1132647/101‑1 (MQ=255)
cggcgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTAt < 2:2374963/101‑1 (MQ=255)
cggcgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTAt < 1:4935869/101‑1 (MQ=255)
ggcgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATc < 2:4270120/101‑1 (MQ=255)
ggcgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATc < 1:2942261/101‑1 (MQ=255)
gcgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCt > 2:3956992/1‑101 (MQ=255)
gcgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCt < 1:4144229/101‑1 (MQ=255)
cgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCtt < 2:3245382/101‑1 (MQ=255)
cgTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCtt < 2:2675130/101‑1 (MQ=255)
gTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTg < 2:674911/101‑1 (MQ=255)
tttCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGc < 2:3653525/101‑1 (MQ=255)
tCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCt < 2:472282/101‑1 (MQ=255)
cGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.AGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTc < 1:3511076/101‑1 (MQ=255)
gCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCa < 1:3295137/101‑1 (MQ=255)
gCCCGAAGACGAAGTAAAAGGGGGCGCTCCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCa < 1:3847225/101‑1 (MQ=255)
cccGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCaa < 2:3206193/101‑1 (MQ=255)
cccGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCaa < 1:2432011/101‑1 (MQ=255)
ccGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCaaa < 2:1024842/101‑1 (MQ=255)
ccGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCaaa > 1:4012101/1‑101 (MQ=255)
cGAAGACGAAGTAAAAGGGGGCGCTTCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAAt < 1:4590877/101‑1 (MQ=255)
cGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAAt < 2:3426508/101‑1 (MQ=255)
gAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATg > 2:3575222/1‑101 (MQ=255)
aaGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGt > 1:2284258/1‑101 (MQ=255)
gACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTcc < 2:487527/101‑1 (MQ=255)
gccccgaaaaGGGGGCGCTGCCCACCTCTTGGCC..TTCGGCC.AATTTAAACCCCGGGATATTTGCGGCAAGGTGAAAGGA.CGGGGTTTATCTTGCCCCAAAt > 2:3892540/7‑101 (MQ=9)
gAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGCGATATTTGAGGCAAGAT.AAAGGATCCTGTTTTATCTTGCCTCAAATGTCCCgg > 2:853031/1‑101 (MQ=255)
aaGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCggg > 1:3810552/1‑101 (MQ=255)
aGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCgggg < 1:306068/101‑1 (MQ=255)
tAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCGAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGc > 2:2892693/1‑101 (MQ=255)
gggcaGGGGGCGCTGCCC.CCTCTTGG.CCTTTG.GCCAA..TTCACCCCTGGGATATTTCGGGCAAGATGAAATCATGCCCCTTCATCTTGCCGCAAATATCCCg > 2:2059290/5‑101 (MQ=0)
gggcaGGGGGCGCTGCCC.CCTCTTGG.CCTTTG.GCCAA..TTCACCCCTGGGATATTTCGGGCAAGATGAAATCATGCCCCTTCATCTTGCCGCAAATATCCCg > 2:284437/5‑101 (MQ=0)
aaaaGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGcc > 2:2735687/1‑101 (MQ=255)
aaaaGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGcc < 2:4977770/101‑1 (MQ=255)
aaaaGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGcc > 2:1407155/1‑101 (MQ=255)
aaaaGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGcc < 2:4377347/101‑1 (MQ=255)
aaaaGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGcc < 1:3398034/101‑1 (MQ=255)
aaGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTg > 1:2470075/1‑101 (MQ=255)
gggggCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTggg > 1:1192276/1‑101 (MQ=255)
ggggCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTgggg > 1:1844010/1‑101 (MQ=255)
ggggCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTgggg > 1:1901732/1‑101 (MQ=255)
ggggCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTgggg < 1:4739628/101‑1 (MQ=255)
ggggCAATGCCC.CGTC.TGG.C..TTC.GCT.A..TTCTTCCCGGGGGTATTTGAGGCAGGAT.AAAGGAGGCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTgggg < 1:419654/101‑1 (MQ=21)
gggCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTggggg < 2:3374492/101‑1 (MQ=255)
ggCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATTTCCCGGGGGCCTGGGGGc < 2:1761154/101‑1 (MQ=255)
gcTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAgg > 1:2568390/1‑100 (MQ=255)
gcTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAgc < 1:436361/101‑1 (MQ=255)
gCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGcc > 2:2974169/1‑101 (MQ=255)
ccc.ccTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGccc > 2:3842010/1‑101 (MQ=255)
c.ccTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGccccc > 2:1577741/1‑101 (MQ=255)
ccTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCa > 1:4054247/1‑101 (MQ=255)
c.tGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGcc > 1:889293/1‑101 (MQ=255)
tGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGGAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCt > 2:4181296/1‑101 (MQ=255)
cgg.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCt < 2:4953482/100‑1 (MQ=255)
gg.C..TTC.GCC.A..TTCCCCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCtt < 1:1570754/101‑1 (MQ=255)
gg.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCtt < 2:2435210/101‑1 (MQ=255)
gg.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCtt > 1:2096599/1‑101 (MQ=255)
gg.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCtt > 2:737650/1‑101 (MQ=255)
g.C..TTC.GCC.A..TTCCCCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTa < 2:1261246/101‑1 (MQ=255)
c..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAg > 2:2175012/1‑101 (MQ=255)
c..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAg > 2:4349370/1‑101 (MQ=255)
c.A..TTCCCCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTc < 2:1475335/101‑1 (MQ=255)
c.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTc > 2:4588565/1‑101 (MQ=255)
a..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCa > 1:3333716/1‑101 (MQ=255)
a..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCa > 2:3297943/1‑101 (MQ=255)
ttgccccccGGGATATTTGAGGCAAGAT.AAAGGAGCGTGTTTAATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCAc < 2:3618823/97‑1 (MQ=255)
ttCCCCCCCGGGATATTTGAGGCGAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCAc < 1:2892906/101‑1 (MQ=255)
ccccccgGGGATATTTAGGGAAAGAA.AAGGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGc < 1:4410877/99‑1 (MQ=25)
cACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGc > 1:4262442/1‑101 (MQ=255)
ccGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAggcg > 2:3106548/1‑101 (MQ=255)
ggATATTTGAGGGAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAggcggcg > 1:2745826/1‑101 (MQ=255)
gATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAggcggcgg > 1:5006945/1‑101 (MQ=255)
atTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGt > 1:63614/1‑101 (MQ=255)
tGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCCGGCGGCGGCGAAGt > 1:2226869/1‑101 (MQ=255)
tGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGt > 2:4757719/1‑101 (MQ=255)
tGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGt > 2:1681203/1‑101 (MQ=255)
aGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCCTAGCGTTTCACGCagg.ggcggccggagttc > 1:1023533/1‑93 (MQ=37)
gCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGTTCAc > 1:1465173/1‑101 (MQ=255)
gCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGTTCAc < 1:4852730/101‑1 (MQ=255)
cAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGTTCACg > 2:4908677/1‑101 (MQ=255)
cAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGTTCACg > 1:365907/1‑101 (MQ=255)
aT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGTTCACGCTga > 1:3567301/1‑101 (MQ=255)
aT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGTTCACGCTga > 2:2312638/1‑101 (MQ=255)
t.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGTTCACGCTgag > 2:4024868/1‑101 (MQ=255)
t.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGTTCACGCTgag > 1:1269810/1‑101 (MQ=255)
t.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGCTTCACGCAGGCGGCGGCGTAGCTCACGCTgag > 2:1639011/1‑101 (MQ=255)
aaaGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGTTCACGCTgaga > 1:542576/1‑101 (MQ=255)
aaaGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGTTCACGCTgaga > 2:620804/1‑101 (MQ=255)
aaGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGTCTTAGCGTTTCACGCAGGCGGCGGCGTAGTTCACGCTGAGAt < 2:2578628/101‑1 (MQ=255)
aGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGTTCACGCTGAGATc > 2:4784213/1‑101 (MQ=255)
aGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGTTCACGCTGAGATc < 2:2526476/101‑1 (MQ=255)
|
CCGGCGAAAATCGCGGCGTTTCGCCCGAAGACGAAGTAAAAGGGGGCGCTGCCC.CCTC.TGG.C..TTC.GCC.A..TTCACCCCCGGGATATTTGAGGCAAGAT.AAAGGAGCCTGTTTTATCTTGCCTCAAATGTCCCGGGGGCCTGGGGGCAGCGCCCCCAGCCTTAGCGTTTCACGCAGGCGGCGGCGTAGTTCACGCTGAGATCG > NC_014034/243533‑243733
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|