Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 2,494,003 | A→G | 2.8% | intergenic (+51/‑191) | RCAP_rcc02319 → / → RCAP_rcc02320 | hypothetical protein/hypothetical protein |
Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 2,494,003 | 0 | A→G | 2.8% | 4.1 ‑2.5 ‑0.7 | 176 | intergenic (+51/‑191) | RCAP_rcc02319/RCAP_rcc02320 | hypothetical protein/hypothetical protein |
Reads supporting (aligned to +/- strand): new base (4/1): ref base (65/105): total (70/106) | ||||||||||
Fisher's exact test strand distribution p-value = 7.97e-02 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.21e-01 |
Only 100 of 198 total aligned reads displayed.
GCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.A.GGGGGGG.CG..CTGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.AGCAGAAGGGGGGCAAGCG.CC.CCCTGCCCCGGCGGTCCGT > NC_014034/2493904‑2494101
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gTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgcagc < 1:494049/101‑1 (MQ=25)
tCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgcagca < 2:1452183/101‑1 (MQ=25)
tCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgcagca > 2:2366683/1‑101 (MQ=25)
tCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGAGATTTgcagca > 1:3007266/1‑101 (MQ=25)
cTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCTCGCTCCCAGCGGGCTCCCCCCCGGGCATTTGCCGCaa > 1:4312389/1‑101 (MQ=255)
cTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCaa < 1:1215081/101‑1 (MQ=25)
tGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAg < 1:2466538/101‑1 (MQ=21)
tGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAg < 1:1662931/101‑1 (MQ=21)
ggCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGa > 2:3761066/1‑101 (MQ=21)
ccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGa < 2:427891/101‑1 (MQ=21)
ccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGa < 1:4437683/101‑1 (MQ=21)
ccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTCCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGa < 1:1124394/101‑1 (MQ=21)
cAGCGCCGGGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaa < 2:2600911/101‑1 (MQ=18)
cAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaa < 2:3880396/101‑1 (MQ=21)
aGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaaa < 1:2439063/101‑1 (MQ=21)
gcgcCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAc > 1:2642156/1‑101 (MQ=21)
cgccgcGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAcc > 2:2541273/1‑101 (MQ=21)
cgccgcGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAcc > 1:1958933/1‑101 (MQ=21)
gccgcGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCg < 1:4489113/101‑1 (MQ=21)
gccgcGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGGCCGCAAGCGGGCCCCCCCCCGGGGATTTTCCGCCAGAAGaaaaag > 1:3452938/1‑98 (MQ=16)
ccgcGGCGGGCGCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCgg < 1:3951055/101‑1 (MQ=21)
gcggcgGGCGCGCGGCACGACAGGCCGAGGA.A.GGGGGGG.GGGCCGGCCCCCCGCCCCCAACGGGACCCCCCCCCGGCGATTTCCACCAAAATAAAAACGGa > 1:902978/1‑101 (MQ=255)
ggcgggcgCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGc > 1:3372577/1‑101 (MQ=21)
gggcgGGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCtt < 1:2839980/101‑1 (MQ=18)
gggcgCGCGGCACGACAGGCCGAGGG.A.GGGGGGGACG..GTGCCCCCCGTCCGCAAGCGGCCTCTCACCCGGTTTTTGGCAGCGAGAGGGAACCTGAttgcct > 2:162605/1‑96 (MQ=9)
ggcgCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCttt < 2:3009561/101‑1 (MQ=21)
ggcgCGCGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCttt < 2:1945107/101‑1 (MQ=21)
gcgcgcGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTc < 1:4292234/101‑1 (MQ=21)
gcgcgcGGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTc < 2:151780/101‑1 (MQ=21)
cgcgcgGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa < 2:1562765/101‑1 (MQ=21)
gcgcgGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCAt < 2:1815855/101‑1 (MQ=21)
cgGCACGACAGGCCGAGTAGG.GGGGGGG.CG..CTCCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCtt < 2:4827556/101‑1 (MQ=18)
cgGCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGCTATTTGCAGCAAGATGAAACCGGATGCCTTTCATCtt > 2:3262291/1‑101 (MQ=21)
cagCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCtt < 2:5014979/99‑1 (MQ=18)
ggCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTg < 1:1745292/101‑1 (MQ=21)
gCACGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGc > 2:4969158/1‑101 (MQ=21)
aCGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGccc < 1:4140015/101‑1 (MQ=21)
aCGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGccc > 1:2294179/1‑101 (MQ=21)
aCGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGccc < 1:1085005/101‑1 (MQ=21)
cGACAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCg < 1:1801820/101‑1 (MQ=21)
aCAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGGTATTTGCAGCAAGATGAAAACGGATGCCTTTCATCTTTCCCGaa > 1:3904886/1‑101 (MQ=18)
cAGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGaaa < 1:577467/101‑1 (MQ=21)
aGGCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAat < 1:1911015/101‑1 (MQ=21)
aGGCCGAGTA.AGGGGGGGG.CC..CTTCCCCCCCTCCGCAAGGGGGCCCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAat < 2:3696304/101‑1 (MQ=21)
ggCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAata < 2:582101/101‑1 (MQ=21)
ggCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAata < 1:739234/101‑1 (MQ=21)
gCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAatat < 2:1716759/101‑1 (MQ=21)
gCCGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAatat < 1:3600293/101‑1 (MQ=18)
cGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATcc < 2:2103101/101‑1 (MQ=18)
cGAGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATcc < 2:3591959/101‑1 (MQ=21)
taGTA.AGGGGGGGG.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATccc < 2:2443922/100‑1 (MQ=18)
aGTA.AGGGGGGGG.CG..CTGACCCCAGTCCGCAAGCGGACTTCCCCCGTTATATTTGCAGCAAGATGAAACCGGATTGCTTTCATATTGCCCGAAATATCCCg > 2:826774/1‑101 (MQ=18)
gtaagggggggg.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgg > 2:50858/6‑101 (MQ=255)
taagggggggg.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCCAGATGAAACCGGGTGCCTTTCATCTTGCCCGAAATATTCCggg > 2:1893391/5‑101 (MQ=18)
taagggggggg.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggg > 1:3848389/5‑101 (MQ=255)
taagggggggg.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCCAAAAATCCCgcg > 2:3525894/5‑99 (MQ=18)
aagggggggg.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgggg > 1:3722445/4‑101 (MQ=255)
agggggggg.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCCGCAAGATGAAACCCGATGCCTTTCATCTTGCCCGAACTATCCCggggg > 2:1216163/3‑101 (MQ=18)
agggggggg.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggggg > 2:4782252/3‑101 (MQ=255)
ggggg.CG..CTGCCCCCCGTGCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATCAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGa < 1:5026068/101‑1 (MQ=18)
ggggg.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGa < 2:560147/101‑1 (MQ=255)
ggg.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.t < 1:2724890/101‑1 (MQ=255)
ggg.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.t < 1:231201/101‑1 (MQ=255)
gg.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.Tg < 1:2366847/101‑1 (MQ=255)
gg.CG..CTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.Tg < 2:4312072/101‑1 (MQ=255)
cg..cTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGc < 1:4217268/101‑1 (MQ=255)
g..cTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..g > 2:2348482/1‑101 (MQ=255)
g..cTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..g > 1:944133/1‑101 (MQ=255)
ccTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..g < 1:1388401/100‑1 (MQ=255)
tGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aa > 1:2942809/1‑100 (MQ=255)
ccccccCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aag < 2:295632/100‑3 (MQ=255)
cccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagcc < 1:2236576/101‑5 (MQ=255)
cccccCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagc < 1:779015/101‑4 (MQ=255)
cccgtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAAAATCCCGGGGGGTGAA.TGGC..G.aagccag > 1:2081755/5‑95 (MQ=21)
gtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGCAATATCCCGGGGGGCGAA.TGGC..G.aagccagagg > 2:4054418/2‑92 (MQ=18)
gtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagccagagg < 2:4234184/100‑10 (MQ=255)
gtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagccagagg > 2:4627169/2‑92 (MQ=255)
aaGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCa > 2:2286492/1‑101 (MQ=18)
aGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCag > 2:2861193/1‑100 (MQ=18)
gCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCagc < 2:2245006/101‑3 (MQ=18)
ggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCagcgc > 1:4922635/1‑97 (MQ=17)
ggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCagcgc > 1:4959002/1‑97 (MQ=17)
gACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.cc > 1:2912258/1‑101 (MQ=18)
aCTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.cc.c > 2:380330/1‑101 (MQ=18)
cTCCCCCCGGGATATTTGCAGCAAGTTGAAACCGGATGCCCTTCATCTTGCCCGAAATATCCCGGGGGGTGAG.TCGC..GAAGCCACAGGGGGGC.AGCG.cc.cc > 2:1792817/1‑101 (MQ=17)
tCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.cc.ccc > 2:3924517/1‑101 (MQ=17)
cGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCCTCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCC.CCCTGccc > 1:1996975/1‑101 (MQ=17)
ggATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCC.CCCTGCCCcg > 1:4557965/1‑101 (MQ=17)
gATATTTGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAA.AGGCCAAGAGGGGGCAGCG.CC.CCCTGCCCcgc > 1:1106325/1‑100 (MQ=2)
gATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.AAGCCAGAGGGGGCCAGCGCCC.CCCTGCCCcgg > 1:1500262/1‑101 (MQ=18)
atatTTGCAGGAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.GGGC..GAAGCCAGAGGGGGGCCGGGC.CC.CCCTGCCCcgcc > 1:1654281/1‑99 (MQ=17)
atatTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGCGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCC.CCCTGCCCcggc > 1:1947906/1‑101 (MQ=17)
tatTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCC.CCCTGCCCcggcg > 2:4221845/1‑101 (MQ=18)
tGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCC.CCCTGCCCCGGCGGTcc > 1:3887436/1‑101 (MQ=17)
tGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCC.CCCTGCCCCGGCGGTcc > 1:3037526/1‑101 (MQ=17)
tGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCC.CCCTGCCCCGGCGGGcc > 1:3779656/1‑101 (MQ=17)
tGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGG.GAGCG.CCGCCCTGCCCCGGCGGTcc > 2:1902392/1‑101 (MQ=18)
gcagcaAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCC.CCCTGCCCCGGCGGTCCg < 1:3262542/101‑1 (MQ=17)
gcagcaAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCC.CCCTGCCCCGGCGGTCCg < 1:67356/101‑1 (MQ=17)
cagcaAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCC.CCCTGCCCcggcggggcgt > 2:4463382/1‑96 (MQ=17)
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GCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTA.A.GGGGGGG.CG..CTGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.AGCAGAAGGGGGGCAAGCG.CC.CCCTGCCCCGGCGGTCCGT > NC_014034/2493904‑2494101
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|