| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,566,561 | C→T | 2.0% | intergenic (+33/+161) | purD → / ← sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,566,561 | 0 | C→T | 2.0% | 2.7 ‑1.5 ‑0.8 | 203 | intergenic (+33/+161) | purD/sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Reads supporting (aligned to +/- strand): new base (2/2): ref base (43/156): total (45/158) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.14e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.52e-01 | ||||||||||
Only 100 of 224 total aligned reads displayed.
CGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GG.GGG.CGCTGCCCCC.CTCCT..G..CTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGC > NC_014034/2566468‑2566661
|
cGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGcc < 1:936316/101‑1 (MQ=37)
cGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGcc < 1:3815222/101‑1 (MQ=37)
cGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTc < 1:1152670/101‑1 (MQ=37)
ggtCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCa < 2:1842999/99‑1 (MQ=25)
gATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCa < 2:3126198/101‑1 (MQ=37)
tCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCAcc < 2:3286119/101‑1 (MQ=37)
gACTGTCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCAcccc < 2:1103212/101‑1 (MQ=25)
gACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTTGGG..CCTCGGGCACTTCAcccc > 2:546213/1‑101 (MQ=255)
aCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCAccccc < 2:4887723/101‑1 (MQ=25)
tGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCg < 2:2580723/101‑1 (MQ=25)
tGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCg < 2:4553621/101‑1 (MQ=25)
tGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CCCCT..GGCCCTCCGCCGATTCACCCCCCg > 1:3059487/1‑101 (MQ=255)
gCCCGAGGGGTTCTTACGGCGCGGCAACGGCTGGCGCGCGCTCTGAGAAGAAAC.GGAGGG.CGCTGCGCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCggg < 2:3343907/101‑1 (MQ=16)
gCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGTCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCggg < 1:4309561/101‑1 (MQ=25)
cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ata < 1:2547606/101‑1 (MQ=25)
aGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATAtt < 1:15296/101‑1 (MQ=21)
aGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATAtt < 1:5046351/101‑1 (MQ=21)
ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATAttt < 1:4823843/101‑1 (MQ=21)
gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTc < 2:3172939/101‑1 (MQ=21)
gTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCCAATCACCCCCCGGG.ATATTTTgg > 2:4745212/1‑101 (MQ=21)
ttCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCggg > 2:2644884/1‑101 (MQ=21)
gcctccGCGACATCGGCTGGCGCGCGTTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAg < 2:558382/101‑1 (MQ=18)
ccgccgCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGa < 1:3738925/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGAt < 1:3134645/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATa < 1:758907/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATa < 2:150726/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATa < 2:2373027/101‑1 (MQ=21)
ccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.GGGCGCCCCC.CTCCT..GGCCTTTCGCCCATTCACCCCCCGGG.ATACTTCGGGCGAGACaa > 2:812208/1‑101 (MQ=16)
ccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATaa < 2:1821522/101‑1 (MQ=21)
ccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATaa < 2:2102822/101‑1 (MQ=21)
ccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATaa < 2:2169155/101‑1 (MQ=21)
ccgcGACATCGGCTGGCGCGCGATCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATaa < 1:2766840/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATaaa < 1:4025861/101‑1 (MQ=21)
gtgACTTCGGCGGGCGCGCGCTCTGAGACAAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCCCCCCCCGGG.ATATTTCGGGCAAGATAaag < 1:2206603/99‑1 (MQ=18)
gcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAaag < 1:3001494/101‑1 (MQ=21)
cgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAaaga < 2:2991831/101‑1 (MQ=21)
gACATCGGCTGGCGCTCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGGCCAATCACCCCCCCGG.GTAATTCGGGCCAGATAaaaaa > 1:2354133/1‑101 (MQ=12)
gACATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCAACCCCCGGG.ATATTTCGGGCAAGATAaagaa < 1:1375187/101‑1 (MQ=21)
aCATCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTACGGGCAAGATAaagaag < 2:2525570/101‑1 (MQ=21)
tCGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTc < 2:2440729/101‑1 (MQ=21)
cGGCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCt < 1:535576/101‑1 (MQ=21)
ggCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCtt < 1:182174/101‑1 (MQ=21)
ggCTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCtt < 2:3402325/101‑1 (MQ=21)
ggCTGGCGCGCCCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCtt < 2:4794865/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCtttt < 2:174030/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCtttt < 1:1041996/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTc < 2:3994153/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTc < 2:5020865/101‑1 (MQ=21)
ggCGCGCGCTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTcc > 1:4956338/1‑101 (MQ=21)
gcgcgcgcTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCt < 2:2861298/101‑1 (MQ=21)
cgcgcgcTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCtt < 1:2093234/101‑1 (MQ=21)
gcgcgcTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCttt < 1:4426888/101‑1 (MQ=21)
gcgcgcTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCttt < 1:1700501/101‑1 (MQ=21)
cgcgcTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTc < 2:1918172/101‑1 (MQ=21)
cgcgcTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTc < 2:406436/101‑1 (MQ=21)
gcgcTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCa < 1:2952744/101‑1 (MQ=21)
gcgcTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCa < 2:426189/101‑1 (MQ=21)
cgcTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCAt < 1:3208980/101‑1 (MQ=21)
cgcTCTGAGACGAAAC.GG.GGGTCGCTTCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCAt < 1:1616734/101‑1 (MQ=25)
gcTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATc < 1:2154159/101‑1 (MQ=21)
gcTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATc < 1:2565977/101‑1 (MQ=21)
gcTCTGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATc < 1:3191357/101‑1 (MQ=21)
ctctGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.t > 2:2387314/1‑101 (MQ=21)
ctctGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.t > 2:4678419/1‑101 (MQ=21)
ctctGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.t < 2:3411039/101‑1 (MQ=21)
ctctGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCAGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.t < 2:1093383/101‑1 (MQ=21)
tctGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.tt > 2:612440/1‑101 (MQ=21)
tctGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.tt < 1:88760/101‑1 (MQ=21)
ctGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTg < 1:582768/101‑1 (MQ=21)
ctGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTATCCTTTCATC.TTg < 2:1974418/101‑1 (MQ=21)
tGAGACGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGc < 2:1073410/101‑1 (MQ=21)
gagaCGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGcc > 1:4110983/1‑101 (MQ=21)
gagaCGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCCGG.AGATTTTGGGGCAGATAAAAAAG.GGGTTTTTCTTTTATT.ttttc > 1:3572030/1‑98 (MQ=2)
agaCGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGccc < 1:1748694/101‑1 (MQ=21)
agaCGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGccc < 1:191171/101‑1 (MQ=21)
cGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGaa > 1:3357414/1‑101 (MQ=21)
cGAAACGGG.GGG.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ACATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGaa > 2:613597/1‑101 (MQ=21)
aaacggg.ggg.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAat < 1:3998860/96‑1 (MQ=21)
aaacggg.ggg.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.AAATTCCGGCCAAAAAAAGAAAG.GACTTTTCTTTTCTTC.TTCCCCGaaaa > 2:4359411/6‑100 (MQ=2)
acggg.ggg.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCTCCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAatat < 2:3198269/98‑1 (MQ=25)
acggg.ggg.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAatat < 2:908820/98‑1 (MQ=25)
acggg.ggg.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAatat < 1:2129400/98‑1 (MQ=25)
cggg.ggg.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGGTAAATTTGGGGC.AGATAAAAAAGAGCTTTTTCTTTTCTTT.TTGCCCCaaaatc > 1:226992/3‑98 (MQ=0)
gg.ggg.CGCTGCCCCCTCTTGG..C..CTTTGGCCAATTCA.CCCCTGGG.ATATTTCGGGCAAGAT...GAA..ATCATGCCCCTTCATC.TTGCCGCAAATATCCCgggggg < 2:1478495/101‑2 (MQ=2)
g.ggg.CGCTGCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAATATCCCg < 2:2456950/101‑1 (MQ=25)
g.ggg.CCCTGCCCCC.TTTTG..GC.CTTTGGCCAATTCA.CCCCTGGG.ATATTTCGGGCAAGAT...GAA..ATCATGCCCCTTCATC.TTGCCGCAAATATCCCgggggga < 2:359618/101‑3 (MQ=2)
gCCCCC.CTCTT..GGCCTTCGGCCAATTCTCCCCCCGGG.ATATTTCGGTCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTTCCCGAAATATCCCGGGGGAGcc < 1:709533/101‑1 (MQ=25)
gCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGGCCGAAATATCCCGGGGGAGcc > 2:4973558/1‑101 (MQ=25)
gCCCCC.CTCTT..GGCCTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAATATCCCGGGGGAGcc < 2:4036376/101‑1 (MQ=37)
ccctcttggccTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAATATCCCGGGGGAGCCCGCt < 1:2645069/91‑1 (MQ=255)
cctcttggccTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAATATCCCGGGGGAGCCCGCtt < 2:3833724/92‑1 (MQ=255)
cctcctggccTTCGCCCAATTCCCCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAATATCCCGGGGGAGCCCGCtt < 1:3930720/92‑1 (MQ=37)
ctcttggccTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAATATCCCGGGGGAGCCCGCTTg < 1:3269055/93‑1 (MQ=255)
ctcttggccTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAATATCCCGGGGGAGCCCGCTTg < 2:2205523/93‑1 (MQ=255)
tggccTTCGGCCAATTCCCCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAATATCCCGGGGGAGCCCGCTTgcggg < 2:4504973/97‑1 (MQ=255)
ggccTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTTCCCGAAATATCCCGGGGGAGCCCGCTTgcgggc > 1:2724557/4‑101 (MQ=255)
ccTTCGGCCAATTCACCCCCCGGG.ATAATTTGGGCAAGATAAAAAAA.GGGTTTTTCTTTTATCTTTTCCCCAAAATCCCCGGGGGGGCCCCCTGgcggggg > 1:4235308/2‑99 (MQ=12)
cTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAATATCCCGGGGGAGCCCGCTTGcgggcggg > 1:3400121/1‑101 (MQ=255)
cTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAATATCCCGGGGGAGCCCGCTTGcgggcggg < 1:4678742/101‑1 (MQ=255)
tCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCggggg > 1:2669553/1‑101 (MQ=255)
|
CGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GG.GGG.CGCTGCCCCC.CTCCT..G..CTTCGGCCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAG.GTCTTTTCCTTTCATC.TTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGC > NC_014034/2566468‑2566661
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|