| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,640,184 | G→A | 14.9% | intergenic (‑160/+116) | thrS ← / ← RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,640,184 | 0 | G→A | 14.9% | 69.4 ‑3.5 0.0 | 193 | intergenic (‑160/+116) | thrS/RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (15/14): ref base (48/116): total (63/130) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.00e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 207 total aligned reads displayed.
TATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGG.CTTC.GGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTC > NC_014034/2640086‑2640285
|
tATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGt < 1:3111059/101‑1 (MQ=255)
tATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGt < 2:2212560/101‑1 (MQ=255)
aTGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTa < 2:1149663/101‑1 (MQ=255)
tGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTAt < 2:4576241/101‑1 (MQ=255)
cGACGCGGCGGCAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTAttt < 1:2462549/101‑1 (MQ=255)
gACGCGGCGGCAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTg < 2:596595/101‑1 (MQ=255)
gcAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGAt < 1:4822526/101‑1 (MQ=37)
cAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATg < 1:3322436/101‑1 (MQ=37)
ggCGTGTCAACCGTGGCGC.TTTGGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATGaa < 2:3870815/101‑1 (MQ=25)
gccGTGCCAACCGT.GCGCTTTTTGCG.AGGCAAAAGGGGGGGCCCTCCCCCCCCC.TGGC.CTTCGGGCAAATTCCCCCCCCGAGGTATTTGGAGCAAGATGaa < 2:1571107/99‑1 (MQ=255)
gCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaa < 2:1311014/101‑1 (MQ=25)
cGTGTCACCCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaag < 2:1998669/101‑2 (MQ=25)
tccaCCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCa < 2:4055416/98‑1 (MQ=21)
tCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCGCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCa > 2:1060519/1‑101 (MQ=21)
tCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCa < 2:3592964/101‑1 (MQ=25)
cAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCAt < 2:4332313/101‑1 (MQ=25)
aaCCGTGGCGC.TTTTGCGCAGGCAAAA.AGGGGGGGCTGCCCCCCCCTTTGC.CCTT.CGCCCATTCACCCCCCCAGGGATTTTGGGCAAAATGaaagacccag > 1:5053521/1‑94 (MQ=255)
aCCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATgg < 1:3436251/101‑1 (MQ=25)
cGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGt < 1:2715080/101‑1 (MQ=25)
tGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc < 1:2159917/101‑1 (MQ=25)
tGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc < 1:1426972/101‑1 (MQ=25)
tGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc < 1:1368349/101‑1 (MQ=25)
gggCGC.TTTTGCGGAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc < 1:1756064/100‑1 (MQ=21)
ggCGC.TTTTGCGCCGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCAAGGAATTTGGAGCAAGATG.AAAGACCATGGGTTCa < 2:879748/101‑1 (MQ=21)
ggCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCa < 2:2736335/101‑1 (MQ=25)
gcgc.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCAt < 2:1596138/101‑1 (MQ=25)
c.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCtt < 1:3124062/101‑1 (MQ=25)
ttttGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTg < 2:4296686/101‑1 (MQ=25)
ttGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGcc < 1:4656310/101‑1 (MQ=25)
tGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCt < 1:2189074/101‑1 (MQ=25)
tGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCt < 1:4611862/101‑1 (MQ=25)
gcgcAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTc < 2:4826725/101‑1 (MQ=25)
gcgcAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTc < 2:2550142/101‑1 (MQ=25)
cgcAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCa < 1:1089099/101‑1 (MQ=25)
gcAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCaa < 1:4774475/101‑1 (MQ=25)
gccccgaaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAat < 1:3887285/95‑1 (MQ=14)
gccccgaaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAat < 1:3195352/95‑1 (MQ=14)
aGGCAAAA.GGGGGGCGCTGCCACCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAat < 1:1852141/101‑1 (MQ=25)
ggCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAata < 2:2932073/101‑1 (MQ=21)
cccgaaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAatat < 1:2965209/97‑1 (MQ=17)
cgaaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATcc < 2:439416/99‑1 (MQ=17)
gaaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA.TGGGGGTT.ATCTTGCCCCAAATATccc > 1:3780954/2‑101 (MQ=17)
aaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg > 1:2578103/1‑101 (MQ=17)
aaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg > 1:621196/1‑101 (MQ=17)
aaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.CGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg > 1:4487786/1‑101 (MQ=17)
aaagggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgg < 1:4141951/98‑1 (MQ=18)
aaagggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgg < 1:531251/98‑1 (MQ=17)
ggggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg < 1:289084/101‑1 (MQ=21)
agggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg < 2:3252288/100‑1 (MQ=18)
agggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg < 2:3534039/100‑1 (MQ=18)
gggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggg < 2:3521188/101‑1 (MQ=21)
ggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCCCCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggt < 1:106036/101‑2 (MQ=18)
ggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggt < 1:4633495/101‑2 (MQ=18)
ggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggg > 2:3196178/1‑101 (MQ=18)
ggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGa < 1:3928763/101‑1 (MQ=25)
cgcTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGt > 2:3075701/1‑101 (MQ=25)
gcTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggc > 2:1413667/1‑95 (MQ=21)
gcTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggc > 2:3701700/1‑95 (MQ=21)
cTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggcg > 2:1513103/1‑94 (MQ=25)
gCCCCCCTC.TTGGCCTTC.GGCCACTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTg < 1:4928576/101‑1 (MQ=25)
gCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTg < 1:1181267/101‑1 (MQ=37)
gCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTg < 2:4038199/101‑1 (MQ=37)
cccccTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggggaggcgaagc > 1:2604683/1‑91 (MQ=25)
cccccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa < 2:5053191/101‑1 (MQ=37)
cccccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa > 1:1640045/1‑101 (MQ=37)
cccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg < 1:2337068/101‑1 (MQ=37)
ccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg > 2:4735993/1‑101 (MQ=37)
ccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg < 2:4643736/101‑1 (MQ=37)
ccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg > 2:3890968/1‑101 (MQ=37)
ccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTAGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGCGGGAGTCCTGAAAgg < 1:4260532/101‑1 (MQ=37)
ccTC.TTGGCCTGC.GGACAATTCACCCCCCGAGGTATCTGGAGCAAGATG.AAAGACCATTGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg < 1:3021335/101‑1 (MQ=21)
ctc.tTGGCCTTC.GGCCATTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa > 2:1866864/1‑101 (MQ=25)
ctc.tTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa > 1:2784059/1‑101 (MQ=37)
c.tTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACg > 2:711154/1‑101 (MQ=37)
c.tTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACg < 2:1247148/101‑1 (MQ=37)
tggccTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg > 2:3724532/5‑101 (MQ=37)
tggccTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg > 1:1493249/5‑101 (MQ=37)
tggccTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg > 1:3565189/5‑101 (MQ=37)
ggccTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgggg > 1:2542152/4‑101 (MQ=37)
ccTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgggggg > 2:2102751/2‑101 (MQ=37)
cTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc < 2:1544919/101‑1 (MQ=255)
cTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc > 2:2881398/1‑101 (MQ=37)
ttC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCa > 1:4739035/1‑101 (MQ=37)
c.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga > 2:2433240/1‑101 (MQ=255)
ggCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag > 1:4385269/1‑101 (MQ=255)
cgCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag < 2:4922051/100‑1 (MQ=37)
ccAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcc > 1:4082888/1‑101 (MQ=37)
ccAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcc < 1:2759494/101‑1 (MQ=255)
aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc > 1:3685505/1‑101 (MQ=37)
aTTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc < 2:4227003/101‑1 (MQ=255)
ttCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc > 1:4000454/1‑101 (MQ=25)
caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc > 2:2186221/3‑101 (MQ=255)
caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc > 1:2237304/3‑101 (MQ=255)
caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc > 2:1731516/3‑101 (MQ=255)
ccccccGGCGTATTTGGAGCAAAGTG.AAAGACCCTGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc < 2:3626203/101‑1 (MQ=21)
ccccccGATGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc > 1:2272521/1‑101 (MQ=25)
ccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCgg < 2:1451870/101‑1 (MQ=255)
gAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt < 2:4602737/101‑1 (MQ=255)
ggTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCttt > 2:1474203/1‑101 (MQ=255)
gTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtc > 1:969299/1‑101 (MQ=255)
|
TATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGG.CTTC.GGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTC > NC_014034/2640086‑2640285
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|