Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 2,640,198 | A→G | 13.1% | intergenic (‑174/+102) | thrS ← / ← RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 2,640,198 | 0 | A→G | 13.1% | 67.5 ‑1.2 ‑0.0 | 221 | intergenic (‑174/+102) | thrS/RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
Reads supporting (aligned to +/- strand): new base (15/14): ref base (78/114): total (93/128) | ||||||||||
Fisher's exact test strand distribution p-value = 3.14e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.66e-01 |
Only 100 of 227 total aligned reads displayed.
GCAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGG.CTTC.GGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCG > NC_014034/2640100‑2640297
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gcAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGAt < 1:4822526/101‑1 (MQ=37)
cAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATg < 1:3322436/101‑1 (MQ=37)
ggCGTGTCAACCGTGGCGC.TTTGGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATGaa < 2:3870815/101‑1 (MQ=25)
gccGTGCCAACCGT.GCGCTTTTTGCG.AGGCAAAAGGGGGGGCCCTCCCCCCCCC.TGGC.CTTCGGGCAAATTCCCCCCCCGAGGTATTTGGAGCAAGATGaa < 2:1571107/99‑1 (MQ=255)
cGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaag < 1:434024/101‑2 (MQ=25)
gtgtCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaaga < 2:202336/101‑3 (MQ=25)
tCAACCGTGGCGC.TTTGGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCa < 2:810723/101‑1 (MQ=21)
cAACCGTGGCGC.TTTTGCGGAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCAt < 1:2839818/101‑1 (MQ=21)
cAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCAt < 2:4332313/101‑1 (MQ=25)
aaCCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg < 1:2753977/101‑1 (MQ=25)
aaCCGTGGCGC.TTTTGCGCAGGCAAAA.AGGGGGGGCTGCCCCCCCCTTTGC.CCTT.CGCCCATTCACCCCCCCAGGGATTTTGGGCAAAATGaaagacccag > 1:5053521/1‑94 (MQ=255)
aCCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATgg < 2:2917796/101‑1 (MQ=25)
aCCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATgg < 1:3436251/101‑1 (MQ=25)
gTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGtt < 2:1577555/101‑1 (MQ=25)
tGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc < 1:2159917/101‑1 (MQ=25)
tGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc < 2:4052647/101‑1 (MQ=21)
tGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc < 1:1426972/101‑1 (MQ=25)
gggCGC.TTTTGCGGAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc < 1:1756064/100‑1 (MQ=21)
ggCGC.TTTTGCGCCGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCAAGGAATTTGGAGCAAGATG.AAAGACCATGGGTTCa < 2:879748/101‑1 (MQ=21)
ttttGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTg < 2:4296686/101‑1 (MQ=25)
tGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCt < 1:4611862/101‑1 (MQ=25)
gcgcAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTc < 2:691865/101‑1 (MQ=25)
gcgcAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTc < 2:2550142/101‑1 (MQ=25)
gcgcAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTc < 2:4826725/101‑1 (MQ=25)
ggcAGGCAAAA.CGGTGGCGCTGCCGCCGCC.TTGGCCTTC.CGGGAATTGACCCCCCGAGGTGTTTGGGGGAAGATG.AAAGGCCATGGGTTCATCTTGCCTCa < 2:3737374/100‑1 (MQ=255)
gcAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCaa < 1:4774475/101‑1 (MQ=25)
gccccgaaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAat < 2:2131694/95‑1 (MQ=14)
gccccgaaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAat < 1:3887285/95‑1 (MQ=14)
cAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCaaa < 1:2353777/101‑1 (MQ=21)
cAGGCAAAA.GGGGGGCGCCGCCCCCCTC.TTGGCCTTC.GGCCTATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGGTGATCTTGGCTCaac > 2:3949109/1‑100 (MQ=18)
aGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAat < 1:4665782/101‑1 (MQ=21)
aGGCAAAA.GGGGGGCGCTGCCACCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAat < 1:1852141/101‑1 (MQ=25)
cgaaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATcc < 2:439416/99‑1 (MQ=17)
gaaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA.TGGGGGTT.ATCTTGCCCCAAATATccc > 1:3780954/2‑101 (MQ=17)
aaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg > 1:621196/1‑101 (MQ=17)
aaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg < 2:2360025/101‑1 (MQ=17)
aaagggggCGCTGCCCCCCTC.TTGGCCTTT.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgg > 1:4509162/4‑101 (MQ=18)
aaagggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgg < 1:531251/98‑1 (MQ=17)
ggggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg < 1:289084/101‑1 (MQ=21)
gggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCCGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCCAAAATCCCcgggg > 1:4414993/1‑101 (MQ=12)
ggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCCCCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggt < 1:106036/101‑2 (MQ=18)
ggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggt < 1:4633495/101‑2 (MQ=18)
ggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggg > 2:2845192/1‑101 (MQ=18)
gggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggtggg < 2:3580942/101‑1 (MQ=21)
ggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGa < 1:3928763/101‑1 (MQ=25)
gcTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggc > 2:1413667/1‑95 (MQ=21)
gcTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTc < 2:1463124/101‑1 (MQ=25)
gcTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCCGGATATTTGCGGCAAGGTGAAAGGA.TGGGGGTT.ATCTTGCCCCAAATATCCCgggggggaggg > 2:3599364/1‑96 (MQ=18)
gCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTg < 1:1181267/101‑1 (MQ=37)
cccccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa < 2:1480954/101‑1 (MQ=37)
ccccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaaa < 2:4965158/101‑1 (MQ=37)
ccccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaaa < 1:2575477/101‑1 (MQ=37)
cccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg > 2:1128055/1‑101 (MQ=37)
ccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg < 2:4643736/101‑1 (MQ=37)
ccTC.TTGGCCTGC.GGACAATTCACCCCCCGAGGTATCTGGAGCAAGATG.AAAGACCATTGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg < 1:3021335/101‑1 (MQ=21)
ctc.tTGGCCTTC.GGCCATTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa > 2:1866864/1‑101 (MQ=25)
tggccTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg > 2:1516698/5‑101 (MQ=37)
tggccTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg > 1:1493249/5‑101 (MQ=37)
cTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc > 2:3119214/1‑101 (MQ=37)
cTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc < 2:1544919/101‑1 (MQ=255)
ttC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCa > 1:4739035/1‑101 (MQ=37)
tC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag < 1:2622072/101‑1 (MQ=255)
c.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga < 1:3141005/101‑1 (MQ=255)
ggCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag > 1:2589894/1‑101 (MQ=37)
cgCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag < 2:4922051/100‑1 (MQ=37)
gCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGc > 2:1312392/1‑101 (MQ=255)
cAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccc > 1:4019638/1‑101 (MQ=37)
aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc > 1:2937973/1‑101 (MQ=255)
aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc < 2:2210/101‑1 (MQ=255)
aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc > 1:3586543/1‑101 (MQ=37)
aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc > 2:3002397/1‑101 (MQ=255)
tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt > 2:4149093/4‑101 (MQ=25)
caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc > 1:2237304/3‑101 (MQ=255)
caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc > 2:1731516/3‑101 (MQ=255)
ccccccGATGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc > 1:2272521/1‑101 (MQ=25)
ccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc < 2:3200410/101‑1 (MQ=255)
ccccccGAGGTATTTGGAGCAAGATG.AAAGACCAGGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc < 1:3561985/101‑1 (MQ=255)
cccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCg > 2:3708087/1‑101 (MQ=255)
gAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt < 2:4602737/101‑1 (MQ=255)
aGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt < 2:353187/101‑1 (MQ=255)
gTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtc > 1:969299/1‑101 (MQ=255)
gTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtc > 1:3117349/1‑101 (MQ=255)
tATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtct > 2:4649427/1‑101 (MQ=255)
tATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtct > 1:4479855/1‑101 (MQ=255)
aTTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc > 2:420130/1‑101 (MQ=255)
aTTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc > 1:4248801/1‑101 (MQ=255)
aTTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc < 2:267479/101‑1 (MQ=255)
tttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCa < 1:2907637/101‑1 (MQ=255)
tttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCa < 2:3685227/101‑1 (MQ=255)
ttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCaa > 1:1101441/1‑101 (MQ=255)
ttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCaa > 2:1645455/1‑101 (MQ=255)
tGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAg < 1:1084044/101‑1 (MQ=255)
tGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAg > 1:1576194/1‑101 (MQ=255)
ggAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGc > 2:4734346/1‑101 (MQ=255)
ggAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGc > 1:140193/1‑101 (MQ=255)
ggAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGc < 1:2020934/101‑1 (MQ=255)
cAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTc > 2:2936765/1‑101 (MQ=255)
aaGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTcc < 2:542851/101‑1 (MQ=255)
aGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCg < 1:495790/101‑1 (MQ=255)
aGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCg > 2:1037954/1‑101 (MQ=255)
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GCAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGG.CTTC.GGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCG > NC_014034/2640100‑2640297
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 27 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|