Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,640,198 A→G 13.1% intergenic (‑174/+102) thrS ← / ← RCAP_rcc02462 threonyl‑tRNA synthetase/hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,640,1980A→G13.1% 67.5 ‑1.2 ‑0.0221intergenic (‑174/+102)thrS/RCAP_rcc02462threonyl‑tRNA synthetase/hypothetical protein
Reads supporting (aligned to +/- strand):  new base (15/14):  ref base (78/114):  total (93/128)
Fisher's exact test strand distribution p-value = 3.14e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.66e-01

Only 100 of 227 total aligned reads displayed.

GCAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGG.CTTC.GGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCG  >  NC_014034/2640100‑2640297
                                                                                                       |                                                                                                   
gcAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGAt                                                                                                    <  1:4822526/101‑1 (MQ=37)
 cAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATg                                                                                                   <  1:3322436/101‑1 (MQ=37)
   ggCGTGTCAACCGTGGCGC.TTTGGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATGaa                                                                                                 <  2:3870815/101‑1 (MQ=25)
   gccGTGCCAACCGT.GCGCTTTTTGCG.AGGCAAAAGGGGGGGCCCTCCCCCCCCC.TGGC.CTTCGGGCAAATTCCCCCCCCGAGGTATTTGGAGCAAGATGaa                                                                                                 <  2:1571107/99‑1 (MQ=255)
     cGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaag                                                                                               <  1:434024/101‑2 (MQ=25)
      gtgtCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaaga                                                                                              <  2:202336/101‑3 (MQ=25)
         tCAACCGTGGCGC.TTTGGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCa                                                                                          <  2:810723/101‑1 (MQ=21)
          cAACCGTGGCGC.TTTTGCGGAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCAt                                                                                         <  1:2839818/101‑1 (MQ=21)
          cAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCAt                                                                                         <  2:4332313/101‑1 (MQ=25)
           aaCCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg                                                                                        <  1:2753977/101‑1 (MQ=25)
           aaCCGTGGCGC.TTTTGCGCAGGCAAAA.AGGGGGGGCTGCCCCCCCCTTTGC.CCTT.CGCCCATTCACCCCCCCAGGGATTTTGGGCAAAATGaaagacccag                                                                                         >  1:5053521/1‑94 (MQ=255)
            aCCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATgg                                                                                       <  2:2917796/101‑1 (MQ=25)
            aCCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATgg                                                                                       <  1:3436251/101‑1 (MQ=25)
               gTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGtt                                                                                    <  2:1577555/101‑1 (MQ=25)
                tGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc                                                                                   <  1:2159917/101‑1 (MQ=25)
                tGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc                                                                                   <  2:4052647/101‑1 (MQ=21)
                tGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc                                                                                   <  1:1426972/101‑1 (MQ=25)
                gggCGC.TTTTGCGGAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc                                                                                   <  1:1756064/100‑1 (MQ=21)
                 ggCGC.TTTTGCGCCGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCAAGGAATTTGGAGCAAGATG.AAAGACCATGGGTTCa                                                                                  <  2:879748/101‑1 (MQ=21)
                       ttttGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTg                                                                             <  2:4296686/101‑1 (MQ=25)
                          tGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCt                                                                          <  1:4611862/101‑1 (MQ=25)
                           gcgcAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTc                                                                         <  2:691865/101‑1 (MQ=25)
                           gcgcAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTc                                                                         <  2:2550142/101‑1 (MQ=25)
                           gcgcAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTc                                                                         <  2:4826725/101‑1 (MQ=25)
                            ggcAGGCAAAA.CGGTGGCGCTGCCGCCGCC.TTGGCCTTC.CGGGAATTGACCCCCCGAGGTGTTTGGGGGAAGATG.AAAGGCCATGGGTTCATCTTGCCTCa                                                                        <  2:3737374/100‑1 (MQ=255)
                             gcAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCaa                                                                       <  1:4774475/101‑1 (MQ=25)
                              gccccgaaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAat                                                                     <  2:2131694/95‑1 (MQ=14)
                              gccccgaaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAat                                                                     <  1:3887285/95‑1 (MQ=14)
                              cAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCaaa                                                                      <  1:2353777/101‑1 (MQ=21)
                              cAGGCAAAA.GGGGGGCGCCGCCCCCCTC.TTGGCCTTC.GGCCTATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGGTGATCTTGGCTCaac                                                                      >  2:3949109/1‑100 (MQ=18)
                               aGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAat                                                                     <  1:4665782/101‑1 (MQ=21)
                               aGGCAAAA.GGGGGGCGCTGCCACCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAat                                                                     <  1:1852141/101‑1 (MQ=25)
                                  cgaaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATcc                                                                 <  2:439416/99‑1 (MQ=17)
                                   gaaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA.TGGGGGTT.ATCTTGCCCCAAATATccc                                                                >  1:3780954/2‑101 (MQ=17)
                                    aaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg                                                               >  1:621196/1‑101 (MQ=17)
                                    aaa.AGGGGGCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg                                                               <  2:2360025/101‑1 (MQ=17)
                                      aaagggggCGCTGCCCCCCTC.TTGGCCTTT.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgg                                                              >  1:4509162/4‑101 (MQ=18)
                                      aaagggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgg                                                              <  1:531251/98‑1 (MQ=17)
                                        ggggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg                                                             <  1:289084/101‑1 (MQ=21)
                                         gggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCCGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCCAAAATCCCcgggg                                                           >  1:4414993/1‑101 (MQ=12)
                                          ggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCCCCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggt                                                          <  1:106036/101‑2 (MQ=18)
                                          ggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggt                                                          <  1:4633495/101‑2 (MQ=18)
                                          ggggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggg                                                          >  2:2845192/1‑101 (MQ=18)
                                           gggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggtggg                                                          <  2:3580942/101‑1 (MQ=21)
                                            ggCGCTGCCCCCCTC.TTGGCCTTC.GGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGa                                                         <  1:3928763/101‑1 (MQ=25)
                                               gcTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggc                                                     >  2:1413667/1‑95 (MQ=21)
                                               gcTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTc                                                      <  2:1463124/101‑1 (MQ=25)
                                               gcTGCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCCGGATATTTGCGGCAAGGTGAAAGGA.TGGGGGTT.ATCTTGCCCCAAATATCCCgggggggaggg                                                     >  2:3599364/1‑96 (MQ=18)
                                                  gCCCCCCTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTg                                                   <  1:1181267/101‑1 (MQ=37)
                                                    cccccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa                                                 <  2:1480954/101‑1 (MQ=37)
                                                     ccccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaaa                                                <  2:4965158/101‑1 (MQ=37)
                                                     ccccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaaa                                                <  1:2575477/101‑1 (MQ=37)
                                                      cccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg                                               >  2:1128055/1‑101 (MQ=37)
                                                       ccTC.TTGGCCTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg                                              <  2:4643736/101‑1 (MQ=37)
                                                       ccTC.TTGGCCTGC.GGACAATTCACCCCCCGAGGTATCTGGAGCAAGATG.AAAGACCATTGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg                                              <  1:3021335/101‑1 (MQ=21)
                                                        ctc.tTGGCCTTC.GGCCATTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa                                             >  2:1866864/1‑101 (MQ=25)
                                                             tggccTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg                                         >  2:1516698/5‑101 (MQ=37)
                                                             tggccTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg                                         >  1:1493249/5‑101 (MQ=37)
                                                                 cTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc                                     >  2:3119214/1‑101 (MQ=37)
                                                                 cTTC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc                                     <  2:1544919/101‑1 (MQ=255)
                                                                  ttC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCa                                    >  1:4739035/1‑101 (MQ=37)
                                                                   tC.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag                                   <  1:2622072/101‑1 (MQ=255)
                                                                    c.GGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga                                  <  1:3141005/101‑1 (MQ=255)
                                                                      ggCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag                                 >  1:2589894/1‑101 (MQ=37)
                                                                      cgCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag                                 <  2:4922051/100‑1 (MQ=37)
                                                                       gCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGc                                >  2:1312392/1‑101 (MQ=255)
                                                                         cAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccc                              >  1:4019638/1‑101 (MQ=37)
                                                                          aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc                             >  1:2937973/1‑101 (MQ=255)
                                                                          aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc                             <  2:2210/101‑1 (MQ=255)
                                                                          aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc                             >  1:3586543/1‑101 (MQ=37)
                                                                          aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc                             >  2:3002397/1‑101 (MQ=255)
                                                                             tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt                          >  2:4149093/4‑101 (MQ=25)
                                                                              caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc                         >  1:2237304/3‑101 (MQ=255)
                                                                              caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc                         >  2:1731516/3‑101 (MQ=255)
                                                                                ccccccGATGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc                       >  1:2272521/1‑101 (MQ=25)
                                                                                ccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc                       <  2:3200410/101‑1 (MQ=255)
                                                                                ccccccGAGGTATTTGGAGCAAGATG.AAAGACCAGGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc                       <  1:3561985/101‑1 (MQ=255)
                                                                                 cccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCg                      >  2:3708087/1‑101 (MQ=255)
                                                                                      gAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt                 <  2:4602737/101‑1 (MQ=255)
                                                                                       aGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt                <  2:353187/101‑1 (MQ=255)
                                                                                         gTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtc              >  1:969299/1‑101 (MQ=255)
                                                                                         gTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtc              >  1:3117349/1‑101 (MQ=255)
                                                                                          tATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtct             >  2:4649427/1‑101 (MQ=255)
                                                                                          tATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtct             >  1:4479855/1‑101 (MQ=255)
                                                                                           aTTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc            >  2:420130/1‑101 (MQ=255)
                                                                                           aTTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc            >  1:4248801/1‑101 (MQ=255)
                                                                                           aTTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc            <  2:267479/101‑1 (MQ=255)
                                                                                            tttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCa           <  1:2907637/101‑1 (MQ=255)
                                                                                            tttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCa           <  2:3685227/101‑1 (MQ=255)
                                                                                             ttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCaa          >  1:1101441/1‑101 (MQ=255)
                                                                                             ttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCaa          >  2:1645455/1‑101 (MQ=255)
                                                                                              tGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAg         <  1:1084044/101‑1 (MQ=255)
                                                                                              tGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAg         >  1:1576194/1‑101 (MQ=255)
                                                                                               ggAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGc        >  2:4734346/1‑101 (MQ=255)
                                                                                               ggAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGc        >  1:140193/1‑101 (MQ=255)
                                                                                               ggAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGc        <  1:2020934/101‑1 (MQ=255)
                                                                                                   cAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTc    >  2:2936765/1‑101 (MQ=255)
                                                                                                    aaGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTcc   <  2:542851/101‑1 (MQ=255)
                                                                                                     aGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCg  <  1:495790/101‑1 (MQ=255)
                                                                                                     aGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCg  >  2:1037954/1‑101 (MQ=255)
                                                                                                       |                                                                                                   
GCAGGCGTGTCAACCGTGGCGC.TTTTGCGCAGGCAAAA.GGGGGGCGCTGCCCCCCTC.TTGG.CTTC.GGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCG  >  NC_014034/2640100‑2640297

Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 27 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG