| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,950,765 | A→C | 3.0% | intergenic (+108/‑52) | RCAP_rcc02761 → / → RCAP_rcc02762 | glutathione S‑transferase/4Fe‑4S ferredoxin, iron‑sulfur cluster binding protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,950,765 | 0 | A→C | 3.0% | 14.8 ‑0.7 ‑0.2 | 298 | intergenic (+108/‑52) | RCAP_rcc02761/RCAP_rcc02762 | glutathione S‑transferase/4Fe‑4S ferredoxin, iron‑sulfur cluster binding protein |
| Reads supporting (aligned to +/- strand): new base (6/3): ref base (153/136): total (159/139) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.10e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.04e-01 | ||||||||||
Only 100 of 327 total aligned reads displayed.
CGGGGGCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTTGCGAAAG > NC_014034/2950665‑2950865
|
ggggCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.aaa < 2:1585932/101‑1 (MQ=255)
ggggCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGGGAA.TTTGCCGTC.AGGC.aaa > 1:1936017/1‑101 (MQ=255)
gggCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAag < 2:3293704/101‑1 (MQ=255)
gggCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAag < 1:2190365/101‑1 (MQ=255)
gtGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAA.CTCGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAgggg < 1:1260861/100‑1 (MQ=255)
tGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAggggg < 1:3425636/101‑1 (MQ=255)
ttcgcctcaCCCCCGGGATATTTGGGGCAAGAT.AAA.CCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAA.TTGGCCG.A.AGGC.CAAGAggggggc < 1:3197482/93‑3 (MQ=25)
ttcgcctcaCCCCCGGGATATTTGGGGCAAGAT.AAA.CCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAA.TTGGCCG.A.AGGC.CAAGAggggggc > 2:1893938/9‑99 (MQ=25)
cccGGACCCCCGGGATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGc > 1:2905245/1‑101 (MQ=255)
ggACCCCCGGGATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTcc > 1:4497450/1‑101 (MQ=255)
ggACCCCCGGGATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTcc < 1:3760722/101‑1 (MQ=255)
ggACCCCCGGGATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTcc > 2:2379020/1‑101 (MQ=255)
gACCCCCGGGATATTTGAGGCAAGATGAAA.CAAGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTccc > 1:3033980/1‑101 (MQ=255)
cccccccGGGATATTTGCGGCAAGATGAAG.GGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAA.TTGGCC.AA.AGGC.CAAGAGGGGGCAGCGcccc < 2:4480383/99‑1 (MQ=0)
cccccGGGATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTccccc < 2:4186523/101‑1 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCt < 2:4375291/101‑1 (MQ=255)
cGGGATATTTGGGGCAAGGTAAAAGCATTGCCCTTT.ATCTTGCCTCAGATATCCC.GGGGGTGAATTTTGGCG.C.AGCCAAAAGAGGGGGCAGcagatcggaa > 1:3081657/1‑92 (MQ=21)
cGGGATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGcc > 2:2168714/1‑101 (MQ=255)
gggATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGccc > 1:4683017/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGcccc < 1:1899996/101‑1 (MQ=255)
ggATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGcccc > 2:2609240/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGcccc > 2:3705574/1‑101 (MQ=255)
gATATTTGAGGCAAGATGAAA.CCCCCCCCTTTCATCGTGCCCCAAATGTCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCg < 2:4730488/101‑1 (MQ=38)
gATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCg < 2:2503236/101‑1 (MQ=255)
atatTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCgg > 2:2475253/1‑101 (MQ=255)
atTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCt > 1:353690/1‑101 (MQ=255)
ttGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCCGCTCCCCCTGCCCCGGCTga > 2:1709471/1‑101 (MQ=255)
ttGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGTTCCCCCTGCCCCGGCTgg > 2:1070232/1‑100 (MQ=255)
ttGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTga > 1:4398116/1‑101 (MQ=255)
ttGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTga > 1:4260655/1‑101 (MQ=255)
tGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTgag < 1:800312/101‑1 (MQ=255)
aGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTgaggg > 1:787670/1‑101 (MQ=255)
ggCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTgaggga < 2:3511373/101‑1 (MQ=255)
gCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTgagggcg > 2:141436/1‑99 (MQ=255)
aGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCg > 2:4068324/1‑101 (MQ=255)
gATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCgg > 1:582926/1‑101 (MQ=255)
gATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCgg > 1:4805143/1‑101 (MQ=255)
gATGAAA.CACGCCCCTTTAATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCgg > 2:4239675/1‑101 (MQ=255)
aaa.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACt < 2:1828042/101‑1 (MQ=255)
aaa.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACt < 1:667267/101‑1 (MQ=255)
aaa.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACt < 2:3045840/101‑1 (MQ=255)
a.cacGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTgg < 2:4768018/101‑1 (MQ=255)
ccTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCtt > 1:2268326/1‑101 (MQ=255)
tttCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGa > 1:4765982/1‑101 (MQ=255)
tttCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGa < 2:3203032/101‑1 (MQ=255)
ttCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGaa > 1:2480261/1‑101 (MQ=255)
tCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAg > 1:4146605/1‑101 (MQ=255)
tCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAg < 1:210004/101‑1 (MQ=255)
tCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAg < 1:1887114/101‑1 (MQ=255)
tCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAg < 2:800964/101‑1 (MQ=255)
tCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAg < 2:3930200/101‑1 (MQ=255)
cATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGa > 1:2389690/1‑101 (MQ=255)
cATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGa < 2:292112/101‑1 (MQ=255)
aTCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGAc < 2:2967797/101‑1 (MQ=255)
ttGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCg > 2:4941542/1‑101 (MQ=255)
ttGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCg < 1:3804260/101‑1 (MQ=255)
tGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGc > 1:5048286/1‑101 (MQ=255)
tGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGc > 1:4628966/1‑101 (MQ=255)
gCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGcc > 1:544240/1‑101 (MQ=255)
gCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGcc < 1:406492/101‑1 (MQ=255)
cccAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTg < 1:1782707/101‑1 (MQ=255)
cccAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTg < 2:1037998/101‑1 (MQ=255)
cAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGAt > 2:1136275/1‑101 (MQ=255)
aaTATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCg > 2:2453297/1‑101 (MQ=255)
atatCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGGTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGa < 1:1201756/101‑1 (MQ=255)
atatCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGa > 2:1968682/1‑101 (MQ=255)
atatCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGa > 2:3618159/1‑101 (MQ=255)
atatCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGa > 1:330708/1‑101 (MQ=255)
atatCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGa < 1:3577038/101‑1 (MQ=255)
atatCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGa > 1:3983913/1‑101 (MQ=255)
atCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAag > 1:1141106/1‑101 (MQ=255)
gcc.GGGGGGTAA.TCTGCCGGCAAGAA.AAAGAGGGGGCAGCCCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAaga < 2:2821447/100‑1 (MQ=255)
ccc.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAagag > 1:4799946/1‑101 (MQ=255)
ccc.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTAAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAagag > 1:4245756/1‑101 (MQ=255)
c.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGc < 2:517027/101‑1 (MQ=255)
gggggTGAA.TTTGCCGTC.GGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGTAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGcc < 2:576152/101‑1 (MQ=255)
gggggTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGcc > 2:1260014/1‑101 (MQ=255)
gggggTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGcc > 2:5004739/1‑101 (MQ=255)
ggggTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGccc < 2:3815895/101‑1 (MQ=255)
gTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCcgcg > 1:1455526/1‑101 (MQ=255)
tGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCcgcgc > 1:3015881/1‑101 (MQ=255)
tGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCcgaga > 2:762203/1‑98 (MQ=255)
gAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCcgcgcg < 2:2762854/101‑1 (MQ=255)
a.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGAt > 1:1982459/1‑101 (MQ=255)
a.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGAt > 2:3405684/1‑101 (MQ=255)
a.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGAGac < 2:4555230/101‑2 (MQ=255)
ttGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCg > 2:4664939/1‑101 (MQ=255)
ttGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCg > 2:3654427/1‑101 (MQ=255)
gCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGc > 2:912496/1‑101 (MQ=255)
gCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGc > 2:3094206/1‑101 (MQ=255)
gTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCttt > 1:2538315/1‑101 (MQ=255)
tC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTTg > 1:500872/1‑101 (MQ=255)
c.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTTGc > 1:4564240/1‑101 (MQ=255)
aGGC.AAAGAGGGGGCAGCGCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGGCCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTTGCg < 1:1521177/101‑1 (MQ=255)
ggC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTTGCGa > 2:4130256/1‑101 (MQ=255)
ggC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTTGCGa > 1:166268/1‑101 (MQ=255)
ggC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTTGCGa > 1:1035843/1‑101 (MQ=255)
gC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTTGCGaa < 1:3654699/101‑1 (MQ=255)
aaaGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTTGCGAAAg > 1:3844475/1‑101 (MQ=255)
aaaGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTTGCGAAAg > 1:2662496/1‑101 (MQ=255)
|
CGGGGGCTCTGCCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAA.CACGCCCCTTTCATCTTGCCCCAAATATCCC.GGGGGTGAA.TTTGCCGTC.AGGC.AAAGAGGGGGCAGCTCCCCCTGCCCCGGCTGAGGGAGGCGGAACTGGAAACCTTGAAGACCCGCCTGATCGAAGAGGCCCGCGCGATCGGCTTTGCGAAAG > NC_014034/2950665‑2950865
Base quality scores:
ATCG
< 3 ≤
ATCG
< 21 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|