BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	300,681	G→A	100%	intergenic (+34/+110)	RCAP_rcc00263 → / ← RCAP_rcc00264	winged helix family two component transcriptional regulator/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	300,681	0	G→A	100.0%	826.5	239	intergenic (+34/+110)	RCAP_rcc00263/RCAP_rcc00264	winged helix family two component transcriptional regulator/hypothetical protein
Reads supporting (aligned to +/- strand): new base (107/129): ref base (0/0): total (109/130)

Only 100 of 259 total aligned reads displayed.


AGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCGCCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTCCGCTTGCGGACGGGGG  >  NC_014034/300583‑300778


aGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCAcc                                                                                                 >  2:3710411/1‑101 (MQ=255)


  cccGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCAcccc                                                                                               <  1:1016694/101‑1 (MQ=255)


  cccGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCAcccc                                                                                               <  2:2024029/101‑1 (MQ=255)


   ccGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCAccccc                                                                                              <  2:4247017/101‑1 (MQ=255)


   ccGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCAccccc                                                                                              <  1:558167/101‑1 (MQ=255)


   ccGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCAccccc                                                                                              <  1:4573711/101‑1 (MQ=255)


   ccGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCAccccc                                                                                              <  1:3024750/101‑1 (MQ=255)


    cGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGAGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCg                                                                                             >  1:4161413/1‑101 (MQ=255)


     gATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGt                                                                                            <  1:1107675/101‑1 (MQ=255)


     gATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGt                                                                                            <  1:4438688/101‑1 (MQ=255)


      aTCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTg                                                                                           >  2:344323/1‑101 (MQ=255)


        ccGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTggg                                                                                         >  1:4863320/1‑101 (MQ=255)


        ccGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTggg                                                                                         <  1:3939734/101‑1 (MQ=255)


          gTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGat                                                                                       >  2:1117055/1‑101 (MQ=255)


          gTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGat                                                                                       <  2:1028572/101‑1 (MQ=255)


          gTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGat                                                                                       <  1:3491472/101‑1 (MQ=255)


             gAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATAtt                                                                                    <  2:4059489/101‑1 (MQ=255)


             gAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGGTTCCC.ACCCCCCCCCCCCCGCgggcaagt                                                                                    >  2:3026983/1‑96 (MQ=255)


              aaTGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATAttt                                                                                   <  1:2969422/101‑1 (MQ=255)


              aaTGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATAttt                                                                                   >  2:1389177/1‑101 (MQ=255)


              aaTGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATAttt                                                                                   >  2:3359344/1‑101 (MQ=255)


               aTGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTg                                                                                  <  2:1985304/101‑1 (MQ=255)


               aTGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTg                                                                                  <  2:1442348/101‑1 (MQ=255)


               aTGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTg                                                                                  >  2:3601343/1‑101 (MQ=255)


                 gcgcGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCa                                                                                <  2:2706389/101‑1 (MQ=255)


                     ggCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCaa                                                                            <  2:1212814/101‑1 (MQ=255)


                     ggCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGGTTTACAACCCCCCCCCCCCCCGGGGGAATTTGCACCa                                                                             >  2:4240510/1‑101 (MQ=255)


                      gCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCTCCAAg                                                                           >  2:1614027/1‑101 (MQ=255)


                        ttCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGt                                                                         <  1:3977451/101‑1 (MQ=255)


                        ttCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGt                                                                         <  1:1138277/101‑1 (MQ=255)


                        ttCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGt                                                                         >  1:135194/1‑101 (MQ=255)


                        ttCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGGTTCAC.ACCCCCCCCCCCCCGCGGGGTCtttttaccccagg                                                                         >  1:1782953/1‑91 (MQ=255)


                         tCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTg                                                                        <  1:1922775/101‑1 (MQ=255)


                         tCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTg                                                                        <  2:2580961/101‑1 (MQ=255)


                         tCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTg                                                                        <  2:513227/101‑1 (MQ=255)


                         tCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGGTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTg                                                                        >  1:4092833/1‑101 (MQ=255)


                          cTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCATTAGC...GGGGGGTTTAC.ACCCCCGCACCCCCTTGGGTTATTTGCACCAAGGGGa                                                                       >  2:1893431/1‑101 (MQ=37)


                          cTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGa                                                                       <  1:154370/101‑1 (MQ=255)


                            gATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGaaa                                                                     <  2:2310695/101‑1 (MQ=255)


                               cACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAggg                                                                  <  2:363775/101‑1 (MQ=255)


                                  ggAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGGGC...GGGGGTTTTAC.ACCCCCGCACGCCCGGGGGCTATTTGCACGATGGAGAAAGGGCAc                                                               >  2:2257912/1‑101 (MQ=255)


                                  ggAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGCCGGGGGGGGGTCAC.CCCCCCCCCCCCCCCCCGGACATTTGCACCAACCTGAGAggg                                                                  >  2:4406028/1‑101 (MQ=255)


                                  ggAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGCGAAAGGGCAc                                                               >  1:357012/1‑101 (MQ=255)


                                   gAATCGGGCGGCTACCGTCTGGTCGCCTGTTACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAATGGCAcc                                                              <  2:842326/101‑1 (MQ=255)


                                   gAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCAcc                                                              <  1:2800151/101‑1 (MQ=255)


                                   gAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCAcc                                                              >  1:3212080/1‑101 (MQ=255)


                                     aTCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCAcccc                                                            >  2:878978/1‑101 (MQ=255)


                                     aTCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCAcccc                                                            <  1:4850331/101‑1 (MQ=255)


                                        gggCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCggg                                                         >  1:2247477/1‑101 (MQ=255)


                                        gggCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGGTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGGGAAAGGGCAACCCcgg                                                         >  1:4406494/1‑101 (MQ=37)


                                            ggcTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCt                                                     <  1:28548/101‑1 (MQ=255)


                                               tACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCt                                                  >  1:4424287/1‑101 (MQ=255)


                                               tACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCt                                                  >  2:4654274/1‑101 (MQ=255)


                                                aCCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCtt                                                 <  2:4334525/101‑1 (MQ=255)


                                                  cGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTc                                               >  2:1659024/1‑101 (MQ=255)


                                                  cGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTc                                               <  2:4615261/101‑1 (MQ=255)


                                                    tCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCAc                                             >  2:4432890/1‑101 (MQ=255)


                                                     cTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCAcc                                            <  1:2411122/101‑1 (MQ=255)


                                                     cTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCAcc                                            >  2:3099435/1‑101 (MQ=255)


                                                     cTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCAcc                                            <  2:4971873/101‑1 (MQ=255)


                                                      tGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCt                                           >  1:2660310/1‑101 (MQ=255)


                                                       ggTCGCCTGATACCGCGNAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCtt                                          <  2:679361/101‑1 (MQ=255)


                                                        gTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTg                                         <  2:3931131/101‑1 (MQ=255)


                                                         tCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTgg                                        <  2:475761/101‑1 (MQ=255)


                                                           gCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTg                                      <  1:3768077/101‑1 (MQ=255)


                                                            ccTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGa                                     <  1:544702/101‑1 (MQ=255)


                                                             cTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGaa                                    >  1:2490844/1‑101 (MQ=255)


                                                              tGATACCGCGCAAGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGaaa                                   >  2:589254/1‑101 (MQ=255)


                                                               gATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGaaaa                                  <  1:768641/101‑1 (MQ=255)


                                                                 tACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAata                                <  1:164057/101‑1 (MQ=255)


                                                                  aCCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCTGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCCCCTTGGTGAAAatat                               <  1:4259629/101‑1 (MQ=255)


                                                                   ccGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATc                              >  1:488193/1‑101 (MQ=255)


                                                                    cgcgCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATcc                             >  1:3164287/1‑101 (MQ=255)


                                                                    cgcgCAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATcc                             <  1:3277375/101‑1 (MQ=255)


                                                                      cgcAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCg                           <  1:3914595/101‑1 (MQ=255)


                                                                      cgcAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCg                           >  1:867123/1‑101 (MQ=255)


                                                                       gcAGGAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCgg                          <  2:1517834/101‑1 (MQ=255)


                                                                          ggAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCggggg                       >  1:1238350/1‑101 (MQ=255)


                                                                           gAGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCgggggg                      >  2:2673986/1‑101 (MQ=255)


                                                                            aGC...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGa                     <  1:2642116/101‑1 (MQ=255)


                                                                             gC...GGGGGGTTCAC.ACCCCCGCACCCCCCTGGGATATTTGCACCAAGGTGAAAAGGGAACCCCGGATCTGCTTTCCCCTTGGTGAAAATATTCCGGGGGGAg                    >  1:1821219/1‑101 (MQ=18)


                                                                              c...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGt                   <  2:2911666/101‑1 (MQ=255)


                                                                              c...GGGGGTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGt                   >  2:4859158/1‑101 (MQ=255)


                                                                                  gggggTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTc                  >  1:2231725/1‑101 (MQ=255)


                                                                                   ggggTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTcc                 <  2:772869/101‑1 (MQ=255)


                                                                                   ggggTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTcc                 <  1:2334064/101‑1 (MQ=255)


                                                                                    gggTTTCAC.CCCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTCCg                <  2:316804/101‑1 (MQ=255)


                                                                                     ggTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTCCGc               <  2:4878276/101‑1 (MQ=255)


                                                                                      gTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTCCGCt              >  2:1788939/1‑101 (MQ=255)


                                                                                      gTTTCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTCCGCt              >  1:3848985/1‑101 (MQ=255)


                                                                                       tttCAC.CCCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTCCGCtt             <  1:3405285/101‑1 (MQ=255)


                                                                                        ttCAC.ACCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTCCGCTTg            >  2:3913038/1‑101 (MQ=255)


                                                                                           ac.acCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTCCGCTTGCgg         <  1:4741783/101‑1 (MQ=255)


                                                                                            c.acCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTCCGCTTGCGGa        >  2:2969889/1‑101 (MQ=255)


                                                                                            c.acCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTCCGCTTGCGGa        <  2:4080288/101‑1 (MQ=255)


                                                                                              acCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTCCGCTTGCGGAc       <  1:1938973/101‑1 (MQ=255)


                                                                                              acCCCCGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTCCGCTTGCGGAc       <  2:2188240/101‑1 (MQ=255)


                                                                                              acCCCCGCACCCCCGTGGGATATTTGCACCAAGGGGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGGGAAAATATCCCGGGGGGAGCCCGCTTGCGGAc       >  2:647607/1‑101 (MQ=25)


                                                                                               cccccGCACCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTCCGCTTGCGGACg      >  1:2001845/1‑101 (MQ=255)


                                                                                                   cgcaCCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTCCGCTTGCGGACggggg  <  1:3359607/101‑1 (MQ=255)


AGCCCGATCCGTCGAATGCGCGGCTTCTGATCACGGAATCGGGCGGCTACCGTCTGGTCGCCTGATACCGCGCAGGAGC...GGGGGTTTCAC.ACCCCCGCGCCCCCGTGGGATATTTGCACCAAGGTGAAAGGGCACCCCGGGATCTGCTTTCACCTTGGTGAAAATATCCCGGGGGGAGTCCGCTTGCGGACGGGGG  >  NC_014034/300583‑300778

Base quality scores:


ATCG

< 3 ≤


ATCG

< 19 ≤


ATCG

< 27 ≤


ATCG

< 34 ≤


ATCG

< 40 ≤


ATCG