| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,439,829 | T→G | 3.3% | intergenic (‑132/+31) | RCAP_rcc03240 ← / ← mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,439,829 | 0 | T→G | 3.3% | 2.7 ‑3.4 0.0 | 185 | intergenic (‑132/+31) | RCAP_rcc03240/mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Reads supporting (aligned to +/- strand): new base (7/4): ref base (154/19): total (162/23) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.41e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 217 total aligned reads displayed.
CGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCT > NC_014034/3439729‑3439930
|
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGt < 1:2053525/101‑1 (MQ=255)
gAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGGAAGATAAAGGGGCTTTGGTTTTTTCTTTTCCCCAATAT.TCCCGGGGTg > 2:400617/1‑101 (MQ=255)
aaaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGAGATTTTGGGCAAGATTAAGGGGGCTTGGTTTTTTTTTTTCCCAAATTT.TCCCGCGGTGc > 1:2453785/1‑101 (MQ=19)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGGAAGATAAAAGGGGTTTGGTTTTTTTTTTTCCCCAAAAT.ACCGGGGGGGC..g > 2:4242378/1‑101 (MQ=255)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..g < 1:1399622/101‑1 (MQ=255)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..g < 2:1993926/101‑1 (MQ=255)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..g < 2:2592837/101‑1 (MQ=255)
aGGAATTCGACCTGCGGCCGATGCCTCCGGCGGGGATATTTTGGGCAAGATAAAGGGGCTTTTCTTTTATTTTTTCCCAAATAT.TCCGGGGGGGC..gggggg > 2:2042127/1‑100 (MQ=37)
gAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCag < 1:3280242/101‑1 (MQ=255)
gAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCag < 2:1000350/101‑1 (MQ=255)
aaTTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCaga < 1:1591640/101‑1 (MQ=255)
aTTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGGAAGATAAAGGGGGTTTGCTTTTTTTTTTTCCCCAATAT.TCCCGGGGTGC..GGGGGGagag > 2:1925220/1‑101 (MQ=255)
aTTCGGCCTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGGAAGATAAAGGGGCTTTGCTTTTTTCTTTCCCCAAATAT.CCCGGGGGGGC..GGGGGCagag > 2:4654332/1‑101 (MQ=38)
aTTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCagag < 1:3876844/101‑1 (MQ=255)
aTTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCagag < 1:3782755/101‑1 (MQ=255)
tCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAAGGGGTTTGCTTTTATCTTTTCCCCAATAT.CCCGGGGGGGC..GGGGGGAGAGcc > 2:2723402/1‑101 (MQ=25)
ggCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTTTTTTTTCCCCAATAT.TCCCGGGGGGC..GGGGGCAGAGcccc > 2:1023233/1‑101 (MQ=25)
gCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGccccc < 1:599897/101‑1 (MQ=255)
gCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGccccc < 1:1703315/101‑1 (MQ=255)
gCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGccccc < 2:224724/101‑1 (MQ=255)
tgactttcGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAA.ACCCATCCCTTTCATCTTGCCCCAAATAT.CCCGGGGGGCCCGGGGGGCAGCGcccccc < 2:1569196/94‑2 (MQ=25)
ggactttcGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAA.ACCCATCCCTTTCATCTTGCCCCAAATAT.CCGGGGGGGCCCGGGGGGCAGCGcccccc < 2:1818013/94‑2 (MQ=25)
tGCGGCCGAGGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAAAGCCCCcgcc < 2:1308152/101‑2 (MQ=255)
gCGGCCGATGCCTCCGGCGGGGATATTTTGGGCAAGATAAAGGGGGTTTGCTTTTATCTTTCCCCAAATAT.TCCGGGGGGGC..GGGGGCAGAGCCCCcgccg > 2:2751483/1‑99 (MQ=21)
gCGGCCGATGCCTCCGGCGGGGATATTTGTGGCAAGATAAAGGGGGTTTGCTTTTATTTTTTCCCAAATATCCCCGGGGGGGG..GGGGGCGAAGccccgccc > 2:4183063/1‑97 (MQ=21)
tttcGAGGCCTCCGGCGGGGATATTTGGGGCAAGATGAA.CCCCATCCCTTTCATCTTGCCCCAAATAT.CCCGGGGGGCCCGGGGGGCAGCGccccccgcca < 1:2949156/98‑6 (MQ=21)
ggCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGGGC..GGGGGCAGAGcgccccccccc > 2:3673349/1‑95 (MQ=21)
cGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAA.ACCCATCCCTTTCATCTTTCCCCCAATAT.CCCGGGGGGCCCGGGGGGCAGCGccccccgcccctt > 2:2481708/1‑93 (MQ=21)
caagCCTCCCCCCGGGATATTTGCGGCAAGATGAA.GGACATCGGCTTCATCTTGCCGCAAATAT.CCCCGGGGCCT..GGGGGCAGAGCCCCCgggctccccga > 1:4906140/4‑94 (MQ=21)
cggcggGGATATTTGGGGCAAGATAAAGGGGGTTTTCTTTTTTTTTTTCCCAAATAT.TCCCGGGGGGC..GGGGGCAGAGGCCC..CGCCGCCACGGTTCCcgcc > 2:1054218/1‑101 (MQ=19)
cggGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCcgcg > 1:1828180/1‑101 (MQ=255)
gggATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGAc > 1:3709383/1‑101 (MQ=255)
ggATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGAcc > 1:1676642/1‑101 (MQ=255)
ggATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGAcc > 2:63170/1‑101 (MQ=255)
ggATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGAGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGAcc > 2:2373753/1‑101 (MQ=255)
gATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGNGACCg > 1:1577169/1‑101 (MQ=255)
gATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCg > 2:1430161/1‑101 (MQ=255)
atatTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGt > 2:3396821/1‑101 (MQ=255)
tatTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGtc > 1:3083740/1‑101 (MQ=255)
atTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGtct > 2:3610699/1‑101 (MQ=255)
tttGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGtctc > 2:4091094/1‑101 (MQ=255)
tGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCg > 2:2100627/1‑101 (MQ=255)
tGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCg > 2:4485982/1‑101 (MQ=255)
tGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCg > 1:4280465/1‑101 (MQ=255)
ggggCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCgg > 2:1847391/1‑101 (MQ=255)
ggggCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCgg > 2:3353978/1‑101 (MQ=255)
gggCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCggg > 1:2300953/1‑101 (MQ=255)
cAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTc > 1:3974902/1‑101 (MQ=255)
cAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTc > 1:4710641/1‑101 (MQ=255)
aGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGc > 1:897853/1‑101 (MQ=255)
gATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc > 2:3165096/1‑101 (MQ=255)
gATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc > 2:4781078/1‑101 (MQ=255)
gATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc > 1:2501892/1‑101 (MQ=255)
tAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAg > 1:3792879/1‑101 (MQ=255)
tAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAg > 2:4009055/1‑101 (MQ=255)
aaaGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgc > 2:2152816/1‑101 (MQ=255)
aaaGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGGGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgc > 1:694355/1‑101 (MQ=255)
aaGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcg > 2:2796598/1‑101 (MQ=255)
aaGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCCCCGGGGGCGCCAgcg > 1:4454213/1‑101 (MQ=25)
aGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcgc > 2:4803536/1‑101 (MQ=255)
ggggCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGcgcg > 2:1632304/1‑101 (MQ=255)
gggCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGcga > 2:3037039/1‑101 (MQ=255)
gggCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGcga > 2:2559240/1‑101 (MQ=255)
ctttgctttTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGcgacga > 2:1178574/1‑101 (MQ=255)
tttgctttTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGat > 1:1227082/1‑101 (MQ=255)
ctttTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATcc > 2:3426495/1‑101 (MQ=255)
ttttATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCca > 2:800862/1‑101 (MQ=255)
ttttATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCca > 1:1602050/1‑101 (MQ=255)
ttttATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCca > 1:273978/1‑101 (MQ=255)
ttATCTTTCCCCAAATAT.CCCGGGGGGGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCAGGCCGCGACCGTCTCCGGGGTCGCAGCCGCGACGATATCcatc > 1:4549515/1‑101 (MQ=25)
tATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCcatca > 1:2782366/1‑101 (MQ=255)
aTCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCcatcat > 1:10853/1‑101 (MQ=255)
aTCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCcatcat > 1:410127/1‑101 (MQ=255)
cTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGCCCGTCTCCGGGGGCGCCAGCGCGACGGTATCCATCATGa > 1:1983825/1‑101 (MQ=37)
cTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCCTCATgc > 2:3026380/1‑100 (MQ=37)
cTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGa > 1:3200690/1‑101 (MQ=255)
cTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGa > 1:3375747/1‑101 (MQ=255)
cTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGa > 1:1433534/1‑101 (MQ=255)
cTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGa > 1:4413726/1‑101 (MQ=255)
cTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGa > 1:1181546/1‑101 (MQ=255)
cTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCACCGGGGTCGCCAGCGCGACGATATCCATCATGa > 1:4617965/1‑101 (MQ=255)
tCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATcc > 2:326889/1‑101 (MQ=255)
tCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATcc > 2:2954464/1‑101 (MQ=255)
cccAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCgg > 2:3933597/1‑101 (MQ=255)
aaaTAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTc > 2:1356792/1‑101 (MQ=255)
aaaTAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTc > 1:1077662/1‑101 (MQ=255)
aaaTAT.CCCGGGGGCGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCGGCGACCGTCTCCGGGGTCGCCAGCGCGACCATATCCATCATGagcaggctc > 2:4942927/1‑93 (MQ=25)
aaTAT.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCa > 1:560377/1‑101 (MQ=255)
atat.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAg > 1:1556191/1‑101 (MQ=255)
atat.CCCGGGGGGGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAg > 2:4566245/1‑101 (MQ=255)
tat.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGc > 2:4730863/1‑101 (MQ=255)
tat.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGCCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGc > 1:4528526/1‑101 (MQ=255)
at.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCt > 2:1680526/1‑101 (MQ=255)
t.CCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTc > 1:4941908/1‑101 (MQ=255)
ccGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGa > 2:4459588/1‑101 (MQ=255)
ccGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGa > 1:440726/1‑101 (MQ=255)
gggggTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGaaa > 1:3559898/1‑101 (MQ=255)
gggggTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGaaa > 1:4027411/1‑101 (MQ=255)
gTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCt > 1:4643263/1‑101 (MQ=255)
gTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCt > 1:5004423/1‑101 (MQ=255)
|
CGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGATATTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGCCCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCT > NC_014034/3439729‑3439930
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|