| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,575,638 | 5 bp→GGGGC | 100% | intergenic (+40/+129) | corA → / ← RCAP_rcc01455 | magnesium/cobalt transport protein CorA/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,575,638 | 0 | C→G | 100.0% | 128.8 | 36 | intergenic (+40/+133) | corA/RCAP_rcc01455 | magnesium/cobalt transport protein CorA/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (0/36): ref base (0/0): total (0/36) | ||||||||||
| * | NC_014034 | 1,575,639 | 0 | C→G | 100.0% | 127.0 | 36 | intergenic (+41/+132) | corA/RCAP_rcc01455 | magnesium/cobalt transport protein CorA/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (0/36): ref base (0/0): total (0/36) | ||||||||||
| * | NC_014034 | 1,575,640 | 0 | A→G | 100.0% | 125.0 | 37 | intergenic (+42/+131) | corA/RCAP_rcc01455 | magnesium/cobalt transport protein CorA/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (0/37): ref base (0/0): total (0/37) | ||||||||||
| * | NC_014034 | 1,575,641 | 0 | T→G | 100.0% | 106.2 | 37 | intergenic (+43/+130) | corA/RCAP_rcc01455 | magnesium/cobalt transport protein CorA/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (0/36): ref base (0/0): total (0/37) | ||||||||||
| * | NC_014034 | 1,575,642 | 0 | T→C | 100.0% | 122.7 | 37 | intergenic (+44/+129) | corA/RCAP_rcc01455 | magnesium/cobalt transport protein CorA/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (0/37): ref base (0/0): total (0/37) | ||||||||||
TGATGGTGGCCTCGGCCTTTCTGTCCTGGGCCTTCTTCAAATGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGCCATTTG.CGGCG.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCAAGAAGAAACCCCTGC > NC_014034/1575540‑1575723
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tgATGGTGGCCTCGGCCTTTCTGTCCTGGGCCTTCTTCAAATGGAAGGACTGGCTTTAGGGCTTGCGCCCCCGCGCGGCTCCGGCGCCCCGAACGCCGcac > 2:1416837/1‑99 (MQ=255)
ggtggCCTCGGCCTTTCTGTCCTGGGCCTTCTTCAAATGGAAGGACTGGCTTTAGGGCTTGCGGCCTCGCGCGGGTCGGGAGCCCCGAACGCCGcgggggg > 2:4836221/1‑95 (MQ=255)
cTGGGCCTTCTTCAAATGGAAGGTCTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGcc < 2:3894280/101‑1 (MQ=25)
cTGGGCCTTCTTCAAATGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGcc < 2:215973/101‑1 (MQ=37)
gggCCTTCTTCAAATGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTG.CCGCCCCCCGCACCCCCAGCCTg < 1:1797535/101‑1 (MQ=255)
ggtctttttAAAATGGAAGGACTGGCTTTAGGGCTTGCGCCCGCGCGCGGCTCGGGCCCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGc < 1:407742/98‑1 (MQ=19)
ttcttcAAATGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCgggg < 2:1750327/101‑1 (MQ=37)
cttcAAATGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGa < 2:4445467/101‑1 (MQ=37)
aaaTGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGAt < 2:435141/101‑1 (MQ=37)
aTGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGt < 1:2190947/101‑1 (MQ=37)
aTGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGt < 2:4575982/101‑1 (MQ=37)
aTGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGt < 2:4642934/101‑1 (MQ=37)
ggACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCcg < 1:2476487/101‑1 (MQ=37)
ggACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCcg < 1:409190/101‑1 (MQ=37)
gcTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCCCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCcgcg < 1:3570893/100‑1 (MQ=25)
aCTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCcgcg < 1:3949041/101‑1 (MQ=37)
tGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGcc < 2:2844861/101‑1 (MQ=37)
ggCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGccc < 2:347712/101‑1 (MQ=37)
ggCTTTAGGGCTGGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGccc < 2:1835066/101‑1 (MQ=25)
tttAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCt < 1:117725/101‑1 (MQ=37)
ttAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCtt < 2:3109199/101‑1 (MQ=37)
tAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTg < 1:4450607/101‑1 (MQ=37)
aGGGCTTGCTCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGc < 1:2506211/101‑1 (MQ=25)
aGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGc < 2:4757535/101‑1 (MQ=37)
aGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGc < 1:4981234/101‑1 (MQ=37)
aGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGc < 2:1130986/101‑1 (MQ=37)
aGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGc < 1:4571955/101‑1 (MQ=37)
ttGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTAtt < 1:3339557/101‑1 (MQ=37)
tGCGCCCGCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTAttt < 2:1551234/101‑1 (MQ=25)
cgcCCTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTgc < 1:1308550/101‑1 (MQ=37)
cTCGCGCGGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCa < 1:125616/101‑1 (MQ=37)
gcgcgGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCaaga < 1:1357138/101‑1 (MQ=37)
gcgcgGCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCaaga < 1:1416964/101‑1 (MQ=37)
gcgGCTCGGGCGCCCGGAACGCGGGGGCCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCaagaag < 2:1629934/101‑1 (MQ=255)
gcgGCTCGGGCGCCCGGAACCCGGGGGGCTGCCGCCC.CCCCCGCCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCaagaag < 1:4836548/101‑1 (MQ=255)
gCTCGGGCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCCCCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCAAGAAGaaa < 1:3559687/101‑1 (MQ=255)
ggCGCCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCAAGAAGAAACCCCt < 2:2638771/101‑1 (MQ=37)
gcgcCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCAAGAAGAAACCCCTg < 1:1200739/101‑1 (MQ=37)
gcgcCCGGAACGCGGGGGGCTGCCGCCC.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCAAGAAGAAACCCCTg < 1:4859222/101‑1 (MQ=37)
cgcCCGGAACGCGGGGGGCTG.CCGCCCCCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCAAGAAGAAACCCCTGc < 1:3777775/101‑1 (MQ=37)
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TGATGGTGGCCTCGGCCTTTCTGTCCTGGGCCTTCTTCAAATGGAAGGACTGGCTTTAGGGCTTGCGCCCTCGCGCGGCTCGGGCGCCCGGAACGCGGCCATTTG.CGGCG.CCCGCACCCCCCGCCTGCGGGGGACGATGTCCCCCGCGCCCCCTTGCGTATTTGCGCCAAGAAGAAACCCCTGC > NC_014034/1575540‑1575723
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 22 ≤
ATCG
< 31 ≤
ATCG
< 39 ≤
ATCG
|