Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 1,397,699 | Δ1 bp | 1.2% | intergenic (+3/+1895) | RCAP_rcc01307 → / ← RCAP_rcc01309 | hypothetical protein/IS66 family transposase |
Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 1,397,699 | 0 | G→. | 1.2% | 3.4 ‑2.0 ‑0.0 | 336 | intergenic (+3/+1895) | RCAP_rcc01307/RCAP_rcc01309 | hypothetical protein/IS66 family transposase |
Reads supporting (aligned to +/- strand): new base (0/4): ref base (147/185): total (147/189) | ||||||||||
Fisher's exact test strand distribution p-value = 1.35e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.63e-01 |
Only 100 of 349 total aligned reads displayed.
ATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGCGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGG > NC_014034/1397599‑1397799
|
tCCGCGGATCCGCGTGCCCCCCCCCGCCCATCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAgg < 1:3294221/101‑1 (MQ=38)
ccGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGt < 2:1353467/101‑1 (MQ=255)
cgcgGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTc < 1:7093897/101‑1 (MQ=255)
ggATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCt < 2:6234386/101‑1 (MQ=255)
tCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccc > 2:1056816/1‑101 (MQ=255)
ggCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccccc > 2:4268260/1‑101 (MQ=255)
ggCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccccc > 1:6875875/1‑101 (MQ=255)
ggCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccccc < 1:2720668/101‑1 (MQ=255)
gCGTGCCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.cccccc < 2:5276835/101‑1 (MQ=255)
cctgccccgccccgcCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCcg < 2:5321083/96‑1 (MQ=255)
gTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCcgc > 2:3212409/1‑101 (MQ=255)
tGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCcgcg > 2:1743778/1‑101 (MQ=255)
aCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCggg < 1:2890876/101‑1 (MQ=255)
cccgccccgcCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCgggg > 1:6776078/1‑100 (MQ=255)
cccgccccgcCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCgggg < 2:2216260/101‑2 (MQ=255)
cccgccccgcCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCgggg < 1:2437216/101‑2 (MQ=255)
cgccccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGgggc < 2:3487543/101‑1 (MQ=255)
cgccccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGgggc < 1:378533/101‑1 (MQ=255)
gccccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGggcg > 1:850225/1‑101 (MQ=255)
gccccgcccATCGGTCGCTCCCCCCGCGGGGGCGAGGATCGAAACTACAGAGGTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGggcg > 1:806424/1‑101 (MQ=255)
cccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTg < 2:4692518/101‑1 (MQ=255)
ccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTgg < 2:3007753/101‑1 (MQ=255)
cgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGa < 1:2837204/101‑1 (MQ=255)
gcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGAt > 1:903685/1‑101 (MQ=255)
gcccATCGGACGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTGC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGAt < 2:4094254/101‑1 (MQ=255)
ccccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGCCGCT.CCCCCCGCGGGGGCGTGGAt < 2:4732715/100‑1 (MQ=255)
ccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCg < 1:4740737/101‑1 (MQ=255)
aTCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGaa > 1:6072754/1‑101 (MQ=255)
tCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGaaa > 2:485571/1‑101 (MQ=255)
tCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGaaa < 1:5342146/101‑1 (MQ=255)
ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACt < 1:1298730/101‑1 (MQ=255)
ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACt < 2:3115585/101‑1 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACtt < 2:521245/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTg < 1:2397348/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTc > 1:4557253/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTc > 1:3126539/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCt < 1:6325333/101‑1 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTg > 1:3576404/1‑101 (MQ=255)
cccccGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGAc > 1:5891032/1‑101 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGAcg > 1:1538653/1‑101 (MQ=255)
cccGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGGTTGC..GTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACATGGCtatggc < 1:221405/101‑6 (MQ=0)
gcgGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCt < 2:646300/101‑1 (MQ=255)
tggggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtca < 1:4369663/100‑1 (MQ=255)
gggggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtca > 1:6526612/1‑101 (MQ=255)
ggggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcat > 2:3663636/1‑101 (MQ=255)
ggggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcat > 2:732954/1‑101 (MQ=255)
gggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatc < 1:4223578/101‑1 (MQ=255)
ggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatca < 1:5706194/101‑1 (MQ=255)
ggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatca < 1:556515/101‑1 (MQ=255)
ggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatca < 1:521302/101‑1 (MQ=255)
ggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatca < 1:1178639/101‑1 (MQ=255)
ggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatca < 1:1385641/101‑1 (MQ=255)
gTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCa > 1:2582276/1‑101 (MQ=255)
tGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCAc > 1:7044335/1‑101 (MQ=255)
gATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGt > 1:2146824/1‑101 (MQ=255)
gATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGt < 1:3494311/101‑1 (MQ=255)
tCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCa < 2:4573672/101‑1 (MQ=255)
cGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCaa < 2:6749551/101‑1 (MQ=255)
aaaCTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAgg < 2:2885089/101‑2 (MQ=255)
aCTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACTCGCTCATCAGCACGTCAAGAtt < 2:850201/101‑1 (MQ=255)
tACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCa > 2:130434/1‑101 (MQ=255)
tACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCa > 1:5809399/1‑101 (MQ=255)
tACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCa > 1:405932/1‑101 (MQ=255)
agagTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCTCCCCCCCGCGGGGGGGTGGATCGAAACTTGTCTGCCGCGCCCATCAGCCCGTCACAATTCAgc > 2:6008922/1‑100 (MQ=255)
gagTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCg > 2:51760/1‑101 (MQ=255)
ttC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTc > 1:496518/1‑101 (MQ=255)
tC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcc < 2:4476246/101‑1 (MQ=255)
c.cGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTccc < 2:1540258/101‑1 (MQ=255)
cGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcccc > 1:5923248/1‑101 (MQ=255)
cGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcccc > 1:370968/1‑101 (MQ=255)
ggTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTccccc < 2:3782687/101‑1 (MQ=255)
gTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcccccc < 1:6629407/101‑1 (MQ=255)
gTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcccccc > 1:1856753/1‑101 (MQ=255)
gTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcccccc < 2:695361/101‑1 (MQ=255)
tCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCcg < 1:2955655/101‑1 (MQ=255)
cTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCcgc < 1:1743842/101‑1 (MQ=255)
cTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCcgc < 1:4118060/101‑1 (MQ=255)
cTTGTTCTGTTC.AGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCACCACGTCAAGATTCAGTCGCTGCCCCcgg > 1:1053707/1‑100 (MQ=37)
ttGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCcgcg > 1:3921337/1‑101 (MQ=255)
gttctgttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCggg > 1:6610629/1‑101 (MQ=255)
ttctgttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCgggg > 1:1012654/1‑101 (MQ=255)
ctgttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGc < 1:6274509/101‑1 (MQ=255)
gttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGt < 2:5528346/101‑1 (MQ=255)
ttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTg < 1:7001299/101‑1 (MQ=255)
tc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTgg > 2:5037981/1‑101 (MQ=255)
cGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGTGGCGTGGAt < 2:2043843/101‑1 (MQ=255)
ggTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:2644820/101‑1 (MQ=255)
gTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:6438274/101‑1 (MQ=255)
gTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:2568570/101‑1 (MQ=255)
tAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 2:1153336/101‑1 (MQ=255)
aaCAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:1261468/1‑101 (MQ=255)
aaCAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:1694150/1‑101 (MQ=255)
aCAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:5814068/1‑101 (MQ=255)
aCAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 1:3078927/1‑101 (MQ=255)
cAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 1:3609527/1‑101 (MQ=255)
cAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 2:3587768/101‑1 (MQ=255)
aGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct < 2:6390125/101‑2 (MQ=255)
aGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct > 1:1646987/1‑100 (MQ=255)
ggTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActc > 2:119506/1‑99 (MQ=255)
ggTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActc < 1:5358861/101‑3 (MQ=255)
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ATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGCGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGG > NC_014034/1397599‑1397799
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 24 ≤
ATCG
< 31 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
|