Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 1,397,699 Δ1 bp 1.2% intergenic (+3/+1895) RCAP_rcc01307 → / ← RCAP_rcc01309 hypothetical protein/IS66 family transposase

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140341,397,6990G→. 1.2% 3.4 ‑2.0 ‑0.0336intergenic (+3/+1895)RCAP_rcc01307/RCAP_rcc01309hypothetical protein/IS66 family transposase
Reads supporting (aligned to +/- strand):  new base (0/4):  ref base (147/185):  total (147/189)
Fisher's exact test strand distribution p-value = 1.35e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.63e-01

Only 100 of 349 total aligned reads displayed.

ATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGCGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGG  >  NC_014034/1397599‑1397799
                                                                                                      |                                                                                                     
 tCCGCGGATCCGCGTGCCCCCCCCCGCCCATCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAgg                                                                                                      <  1:3294221/101‑1 (MQ=38)
  ccGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGt                                                                                                     <  2:1353467/101‑1 (MQ=255)
   cgcgGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTc                                                                                                    <  1:7093897/101‑1 (MQ=255)
      ggATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCt                                                                                                 <  2:6234386/101‑1 (MQ=255)
         tCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccc                                                                                             >  2:1056816/1‑101 (MQ=255)
           ggCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccccc                                                                                           >  2:4268260/1‑101 (MQ=255)
           ggCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccccc                                                                                           >  1:6875875/1‑101 (MQ=255)
           ggCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccccc                                                                                           <  1:2720668/101‑1 (MQ=255)
            gCGTGCCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.cccccc                                                                                          <  2:5276835/101‑1 (MQ=255)
             cctgccccgccccgcCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCcg                                                                                         <  2:5321083/96‑1 (MQ=255)
              gTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCcgc                                                                                        >  2:3212409/1‑101 (MQ=255)
               tGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCcgcg                                                                                       >  2:1743778/1‑101 (MQ=255)
                 aCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCggg                                                                                     <  1:2890876/101‑1 (MQ=255)
                  cccgccccgcCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCgggg                                                                                    >  1:6776078/1‑100 (MQ=255)
                  cccgccccgcCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCgggg                                                                                    <  2:2216260/101‑2 (MQ=255)
                  cccgccccgcCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCgggg                                                                                    <  1:2437216/101‑2 (MQ=255)
                    cgccccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGgggc                                                                                  <  2:3487543/101‑1 (MQ=255)
                    cgccccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGgggc                                                                                  <  1:378533/101‑1 (MQ=255)
                     gccccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGggcg                                                                                 >  1:850225/1‑101 (MQ=255)
                     gccccgcccATCGGTCGCTCCCCCCGCGGGGGCGAGGATCGAAACTACAGAGGTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGggcg                                                                                 >  1:806424/1‑101 (MQ=255)
                       cccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTg                                                                               <  2:4692518/101‑1 (MQ=255)
                        ccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTgg                                                                              <  2:3007753/101‑1 (MQ=255)
                         cgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGa                                                                             <  1:2837204/101‑1 (MQ=255)
                          gcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGAt                                                                            >  1:903685/1‑101 (MQ=255)
                          gcccATCGGACGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTGC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGAt                                                                            <  2:4094254/101‑1 (MQ=255)
                          ccccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGCCGCT.CCCCCCGCGGGGGCGTGGAt                                                                            <  2:4732715/100‑1 (MQ=255)
                            ccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCg                                                                          <  1:4740737/101‑1 (MQ=255)
                              aTCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGaa                                                                        >  1:6072754/1‑101 (MQ=255)
                               tCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGaaa                                                                       >  2:485571/1‑101 (MQ=255)
                               tCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGaaa                                                                       <  1:5342146/101‑1 (MQ=255)
                                 ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACt                                                                     <  1:1298730/101‑1 (MQ=255)
                                 ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACt                                                                     <  2:3115585/101‑1 (MQ=255)
                                  gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACtt                                                                    <  2:521245/101‑1 (MQ=255)
                                   tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTg                                                                   <  1:2397348/101‑1 (MQ=255)
                                     gCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTc                                                                 >  1:4557253/1‑101 (MQ=255)
                                     gCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTc                                                                 >  1:3126539/1‑101 (MQ=255)
                                      cTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCt                                                                <  1:6325333/101‑1 (MQ=255)
                                       tCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTg                                                               >  1:3576404/1‑101 (MQ=255)
                                         cccccGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGAc                                                             >  1:5891032/1‑101 (MQ=255)
                                          ccccGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGAcg                                                            >  1:1538653/1‑101 (MQ=255)
                                           cccGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGGTTGC..GTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACATGGCtatggc                                                           <  1:221405/101‑6 (MQ=0)
                                              gcgGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCt                                                        <  2:646300/101‑1 (MQ=255)
                                                tggggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtca                                                      <  1:4369663/100‑1 (MQ=255)
                                                gggggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtca                                                      >  1:6526612/1‑101 (MQ=255)
                                                 ggggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcat                                                     >  2:3663636/1‑101 (MQ=255)
                                                 ggggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcat                                                     >  2:732954/1‑101 (MQ=255)
                                                  gggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatc                                                    <  1:4223578/101‑1 (MQ=255)
                                                   ggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatca                                                   <  1:5706194/101‑1 (MQ=255)
                                                   ggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatca                                                   <  1:556515/101‑1 (MQ=255)
                                                   ggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatca                                                   <  1:521302/101‑1 (MQ=255)
                                                   ggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatca                                                   <  1:1178639/101‑1 (MQ=255)
                                                   ggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatca                                                   <  1:1385641/101‑1 (MQ=255)
                                                      gTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCa                                                >  1:2582276/1‑101 (MQ=255)
                                                       tGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCAc                                               >  1:7044335/1‑101 (MQ=255)
                                                         gATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGt                                             >  1:2146824/1‑101 (MQ=255)
                                                         gATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGt                                             <  1:3494311/101‑1 (MQ=255)
                                                           tCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCa                                           <  2:4573672/101‑1 (MQ=255)
                                                            cGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCaa                                          <  2:6749551/101‑1 (MQ=255)
                                                              aaaCTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAgg                                        <  2:2885089/101‑2 (MQ=255)
                                                                aCTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACTCGCTCATCAGCACGTCAAGAtt                                      <  2:850201/101‑1 (MQ=255)
                                                                  tACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCa                                    >  2:130434/1‑101 (MQ=255)
                                                                  tACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCa                                    >  1:5809399/1‑101 (MQ=255)
                                                                  tACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCa                                    >  1:405932/1‑101 (MQ=255)
                                                                     agagTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCTCCCCCCCGCGGGGGGGTGGATCGAAACTTGTCTGCCGCGCCCATCAGCCCGTCACAATTCAgc                                  >  2:6008922/1‑100 (MQ=255)
                                                                      gagTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCg                                >  2:51760/1‑101 (MQ=255)
                                                                         ttC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTc                             >  1:496518/1‑101 (MQ=255)
                                                                          tC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcc                            <  2:4476246/101‑1 (MQ=255)
                                                                           c.cGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTccc                           <  2:1540258/101‑1 (MQ=255)
                                                                             cGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcccc                          >  1:5923248/1‑101 (MQ=255)
                                                                             cGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcccc                          >  1:370968/1‑101 (MQ=255)
                                                                              ggTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTccccc                         <  2:3782687/101‑1 (MQ=255)
                                                                               gTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcccccc                        <  1:6629407/101‑1 (MQ=255)
                                                                               gTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcccccc                        >  1:1856753/1‑101 (MQ=255)
                                                                               gTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcccccc                        <  2:695361/101‑1 (MQ=255)
                                                                                tCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCcg                       <  1:2955655/101‑1 (MQ=255)
                                                                                 cTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCcgc                      <  1:1743842/101‑1 (MQ=255)
                                                                                 cTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCcgc                      <  1:4118060/101‑1 (MQ=255)
                                                                                 cTTGTTCTGTTC.AGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCACCACGTCAAGATTCAGTCGCTGCCCCcgg                      >  1:1053707/1‑100 (MQ=37)
                                                                                  ttGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCcgcg                     >  1:3921337/1‑101 (MQ=255)
                                                                                    gttctgttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCggg                   >  1:6610629/1‑101 (MQ=255)
                                                                                     ttctgttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCgggg                  >  1:1012654/1‑101 (MQ=255)
                                                                                       ctgttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGc                <  1:6274509/101‑1 (MQ=255)
                                                                                         gttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGt              <  2:5528346/101‑1 (MQ=255)
                                                                                          ttc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTg             <  1:7001299/101‑1 (MQ=255)
                                                                                           tc.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTgg            >  2:5037981/1‑101 (MQ=255)
                                                                                              cGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGTGGCGTGGAt          <  2:2043843/101‑1 (MQ=255)
                                                                                               ggTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATc         <  2:2644820/101‑1 (MQ=255)
                                                                                                gTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCg        <  1:6438274/101‑1 (MQ=255)
                                                                                                gTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCg        <  2:2568570/101‑1 (MQ=255)
                                                                                                 tAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGa       <  2:1153336/101‑1 (MQ=255)
                                                                                                  aaCAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa      >  2:1261468/1‑101 (MQ=255)
                                                                                                  aaCAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa      >  2:1694150/1‑101 (MQ=255)
                                                                                                   aCAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa     >  2:5814068/1‑101 (MQ=255)
                                                                                                   aCAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa     >  1:3078927/1‑101 (MQ=255)
                                                                                                    cAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc    >  1:3609527/1‑101 (MQ=255)
                                                                                                    cAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc    <  2:3587768/101‑1 (MQ=255)
                                                                                                     aGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct   <  2:6390125/101‑2 (MQ=255)
                                                                                                     aGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct   >  1:1646987/1‑100 (MQ=255)
                                                                                                      ggTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActc  >  2:119506/1‑99 (MQ=255)
                                                                                                      ggTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActc  <  1:5358861/101‑3 (MQ=255)
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ATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGCGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGG  >  NC_014034/1397599‑1397799

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG