BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,786,540	Δ1 bp	100%	coding (674/819 nt)	RCAP_rcc01648 →	ABC transporter permease

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,786,540	0	C→.	100.0%	33.7	314	coding (674/819 nt)	RCAP_rcc01648	ABC transporter permease
Reads supporting (aligned to +/- strand): new base (139/161): ref base (6/7): total (146/168)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.86e-04

Only 100 of 324 total aligned reads displayed.


GCTGATGCCGCATCTGATCGCCGCGGCGCGGGCGGGCGTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCT.GG.CCGCTCGAACGGGATCGGCCTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCGTCGAATGGCT  >  NC_014034/1786442‑1786636


gCTGATGCCGCATCTGATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGGct                                                                                                 >  1:2419516/1‑100 (MQ=255)


 gtggtGCCGGATCTGATCGCCGCCGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGGctt                                                                                                <  2:6948505/97‑3 (MQ=255)


 cTGATGCCGCATCTGATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGGctt                                                                                                >  1:4639468/1‑99 (MQ=255)


  tGATGCCGCATCTGATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAATGGGATCGGCTtt                                                                                               <  1:6299918/101‑1 (MQ=255)


  tGATGCCGCATCTGATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGGCTtt                                                                                               >  1:3118736/1‑101 (MQ=255)


  tGATGCCGCATCTGATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGGCTtt                                                                                               <  2:4906190/101‑1 (MQ=255)


  tGATGCCGCATCTGATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGGCTtt                                                                                               <  2:769837/101‑1 (MQ=255)


     tGCCGCATCTGATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGt                                                                                           >  1:3055693/1‑101 (MQ=255)


      gCCGCATCTGATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTa                                                                                          >  1:2845948/1‑101 (MQ=255)


           aTCTGATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCAt                                                                                     <  1:1833634/101‑1 (MQ=255)


           aTCTGATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGAATTCAt                                                                                     >  1:3332947/1‑101 (MQ=255)


              tGATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTg                                                                                  >  1:6725475/1‑101 (MQ=255)


              tGATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTg                                                                                  <  2:5396404/101‑1 (MQ=255)


              tGATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTg                                                                                  <  1:3761112/101‑1 (MQ=255)


               gATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGa                                                                                 >  2:442954/1‑101 (MQ=255)


               gATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGa                                                                                 >  1:6569258/1‑101 (MQ=255)


               gATCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGa                                                                                 <  2:1802130/101‑1 (MQ=255)


                aTCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGaa                                                                                <  2:5001094/101‑1 (MQ=255)


                aTCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGaa                                                                                <  1:435528/101‑1 (MQ=255)


                 tCGCCGCGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAAt                                                                               <  1:5892445/101‑1 (MQ=255)


                  cgccgcGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAAtt                                                                              >  1:3429065/1‑101 (MQ=255)


                  cgccgcGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAAtt                                                                              <  1:2327835/101‑1 (MQ=255)


                   gccgcGGCGCGGGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGCAttt                                                                             >  2:1269994/1‑101 (MQ=255)


                     cgcggcgcggGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTcc                                                                           <  1:130959/101‑1 (MQ=255)


                      gcggcgcggGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCa                                                                          >  2:4500498/1‑101 (MQ=255)


                      gcggcgcggGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCa                                                                          <  1:1891220/101‑1 (MQ=255)


                       cggcgcggGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAg                                                                         <  1:6891811/101‑1 (MQ=255)


                        ggcgcggGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGa                                                                        >  1:475485/1‑101 (MQ=255)


                        ggcgcggGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGa                                                                        >  1:1689173/1‑101 (MQ=255)


                        ggcgcggGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGa                                                                        >  2:3134816/1‑101 (MQ=255)


                         gcgcggGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGAt                                                                       <  1:2023476/101‑1 (MQ=255)


                          cgcggGCGGGGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATg                                                                      <  2:823376/101‑1 (MQ=255)


                            cgggcgggGCTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGtt                                                                    >  1:5921999/1‑101 (MQ=255)


                              ggcggggcTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCg                                                                  <  1:6993527/101‑1 (MQ=255)


                              ggcggggcTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCg                                                                  <  1:964769/101‑1 (MQ=255)


                              ggcggggcTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCg                                                                  <  2:3145375/101‑1 (MQ=255)


                              ggcggggcTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCg                                                                  <  2:3499793/101‑1 (MQ=255)


                              ggcggggcTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCg                                                                  <  1:4135825/101‑1 (MQ=255)


                                cggggctttCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGAc                                                                <  2:2108425/95‑1 (MQ=255)


                                cggggctttCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGAc                                                                <  2:4000255/95‑1 (MQ=255)


                                 ggggctttCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACa                                                               >  1:499665/6‑101 (MQ=255)


                                 ggggctttCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACa                                                               <  2:207784/96‑1 (MQ=255)


                                  gggctttCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACAt                                                              <  2:1698855/97‑1 (MQ=255)


                                   ggctttCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACAtt                                                             <  1:5756109/98‑1 (MQ=255)


                                   ggctttCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTGCGACAtt                                                             >  2:53091/4‑101 (MQ=255)


                                     ctttCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGc                                                           <  2:59300/100‑1 (MQ=255)


                                     ctttCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGc                                                           <  2:6855419/100‑1 (MQ=255)


                                     ctttCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGc                                                           >  1:1498020/2‑101 (MQ=255)


                                     ctttCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGc                                                           >  1:6103614/2‑101 (MQ=255)


                                       ttCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCg                                                         <  1:1637580/101‑1 (MQ=255)


                                         cGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAg                                                       <  2:3315800/101‑1 (MQ=255)


                                         cGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAg                                                       >  1:2083908/1‑101 (MQ=255)


                                          gCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAgg                                                      >  2:3011999/1‑101 (MQ=255)


                                               tCTGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTc                                                 >  2:1378496/1‑101 (MQ=255)


                                                 tGGAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGc                                               >  2:6220481/1‑101 (MQ=255)


                                                  ggAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCTCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGcc                                              >  1:1062375/1‑101 (MQ=255)


                                                  ggAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGcc                                              >  1:328460/1‑101 (MQ=255)


                                                   gAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCt                                             <  1:4880610/101‑1 (MQ=255)


                                                   gAAGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCt                                             <  2:6103302/101‑1 (MQ=255)


                                                    aaGGTCGTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTg                                            >  2:3529018/1‑101 (MQ=255)


                                                       gTCGTGCGTGTGGTCGAATTTCTGGG.GCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGGCATTGCCGAGGTGCTCGCCTGggc                                         <  2:6895606/101‑1 (MQ=255)


                                                        tcttGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGggcg                                        <  2:4220198/98‑1 (MQ=255)


                                                          gTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGggcggc                                      >  2:2813465/1‑101 (MQ=255)


                                                          gTGCTGGTGGTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGggcggc                                      <  2:3734952/101‑1 (MQ=255)


                                                              tggtggTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCt                                  >  1:4788511/1‑101 (MQ=255)


                                                              tggtggTCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCt                                  >  1:4232789/1‑101 (MQ=255)


                                                               ggtggtCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCtt                                 <  2:1741835/101‑1 (MQ=255)


                                                               ggtggtCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCtt                                 >  1:4484354/1‑101 (MQ=255)


                                                               ggtggtCGAATTTCT.GGTCCGCTCAAACGGGATCGG.CTTTCGTATCAATCTGAATTTCCAGATGTTCGTCATTACCCAGGCGCTCGCCTGGGCCGCGGCtt                                 >  2:3398542/1‑101 (MQ=255)


                                                                gtggtCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCtct                                <  1:4256880/101‑3 (MQ=255)


                                                                  ggtCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCg                              >  1:1014696/1‑101 (MQ=255)


                                                                  ggtCGAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCg                              >  1:5680845/1‑101 (MQ=255)


                                                                      gAATTTCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTAGCCTGGGCGGCGGCTTTCGTCTg                          >  2:217887/1‑101 (MQ=255)


                                                                         tttCTGGG.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCCGCTTTCGTCTGCGt                       >  2:3758696/1‑101 (MQ=255)


                                                                          ttctggg.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTg                      >  2:4252154/6‑101 (MQ=255)


                                                                            ctggg.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGAt                    >  2:6326984/4‑101 (MQ=255)


                                                                            ctggg.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGAt                    >  1:6248141/4‑101 (MQ=255)


                                                                            ctggg.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGAt                    >  2:2663201/4‑101 (MQ=255)


                                                                               gg.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCt                 <  2:6725133/101‑1 (MQ=255)


                                                                               gg.CCGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCt                 <  1:3529154/101‑1 (MQ=255)


                                                                                  ccGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCg               <  2:4325178/101‑1 (MQ=255)


                                                                                  ccGCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCg               <  2:5788239/101‑1 (MQ=255)


                                                                                    gCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTTGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGcc             >  2:1909767/1‑101 (MQ=255)


                                                                                    gCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGcc             <  2:2349308/101‑1 (MQ=255)


                                                                                    gCTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGGGTTGCTCGcc             >  2:5705385/1‑101 (MQ=255)


                                                                                     cTCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCg            <  2:5177805/101‑1 (MQ=255)


                                                                                      tCGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCGt           >  2:4709662/1‑101 (MQ=255)


                                                                                       cGAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCGTc          >  2:5599625/1‑101 (MQ=255)


                                                                                        gAACGGGATCGG.CTTTTGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCGTCg         >  1:6754532/1‑101 (MQ=255)


                                                                                        gAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCGTCg         >  2:716329/1‑101 (MQ=255)


                                                                                        gAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCGTCg         >  2:892931/1‑101 (MQ=255)


                                                                                        gAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCGTCg         >  2:4377684/1‑101 (MQ=255)


                                                                                        gAACGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCGTCg         >  2:2574085/1‑101 (MQ=255)


                                                                                          aCGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCGTCGaa       >  1:2803115/1‑101 (MQ=255)


                                                                                           cGGGATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCGTCGAAt      >  1:5369502/1‑101 (MQ=255)


                                                                                            gggATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTTCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCGTCGAATg     >  1:1168990/1‑101 (MQ=255)


                                                                                            gggATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCGTCGAATg     <  2:7033939/101‑1 (MQ=255)


                                                                                             ggATCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCGTCGAATgg    <  1:4602631/101‑1 (MQ=255)


                                                                                               aTCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCGTCGAATGGCt  <  2:1014661/101‑1 (MQ=255)


                                                                                               aTCGG.CTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGAGGCGGCTTTCGTCTGCGTGATGCTCGCCGTCGAATGGCt  >  2:1491963/1‑101 (MQ=255)


GCTGATGCCGCATCTGATCGCCGCGGCGCGGGCGGGCGTTTCGCTGATCTGGAAGGTCGTGCTGGTGGTCGAATTTCT.GG.CCGCTCGAACGGGATCGGCCTTTCGTATCCATCTGAATTTCCAGATGTTCGACATTGCCGAGGTGCTCGCCTGGGCGGCGGCTTTCGTCTGCGTGATGCTCGCCGTCGAATGGCT  >  NC_014034/1786442‑1786636

Base quality scores:


ATCG

< 3 ≤


ATCG

< 24 ≤


ATCG

< 31 ≤


ATCG

< 35 ≤


ATCG

< 41 ≤


ATCG