| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,185,849 | Δ1 bp | 100% | intergenic (+122/‑383) | mtlK → / → RCAP_rcc02028 | mannitol 2‑dehydrogenase/FeoA family protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,185,849 | 0 | C→. | 100.0% | 18.1 | 121 | intergenic (+122/‑383) | mtlK/RCAP_rcc02028 | mannitol 2‑dehydrogenase/FeoA family protein |
| Reads supporting (aligned to +/- strand): new base (28/85): ref base (6/2): total (34/87) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.13e-03 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.19e-05 | ||||||||||
Only 100 of 145 total aligned reads displayed.
ACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCG.CCCCGCACCCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAACCG.CCCCTTTCACCTT > NC_014034/2185751‑2185943
|
aCAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCAcc > 2:885818/1‑101 (MQ=255)
aCAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCAcc < 2:2514395/101‑1 (MQ=255)
aCAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCAcc < 1:2894949/101‑1 (MQ=255)
aCAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCAcc < 1:2004997/101‑1 (MQ=255)
aCAGGCGGCCCCGCTCCCGCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCAcc < 2:4801910/101‑1 (MQ=255)
ggcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCAccccc < 2:160742/101‑1 (MQ=255)
ggcggcCCCCCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCATCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCAccccc < 1:4014894/101‑1 (MQ=38)
gcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCAcccccg < 1:6346624/101‑2 (MQ=255)
cggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCAcccccgg < 1:3506062/101‑3 (MQ=255)
cggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCAcccccgg > 2:6207185/1‑99 (MQ=255)
ggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGTCCCCGCAcccccggc > 1:5404325/1‑98 (MQ=255)
cccGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGGTCCG.CCCCCGCCCCCCCGGCgga > 2:3820494/1‑99 (MQ=255)
ccccccccccccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTAt < 2:6926760/96‑1 (MQ=25)
cGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTAC...CGGGGGGGCG.CCCCCCCcccccccccccgcc > 1:2662324/1‑93 (MQ=255)
gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGGGCCGCCCCCCCACCCCCCgcgcgttt > 1:3954812/1‑94 (MQ=255)
gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTAttt < 1:5195012/101‑1 (MQ=255)
gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTAttt < 1:6190697/101‑1 (MQ=255)
ctccctccCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTa < 2:2053227/101‑1 (MQ=255)
ctccctccCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTa < 1:2940446/101‑1 (MQ=255)
tgcctcccGGGCGGGGCGGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTTCCGAGGCGTCCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTAt < 1:1311992/99‑1 (MQ=25)
ccctcccGGGCGGGGCCGCCTGATGTGCAAGGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCG.CCCCCGCCCCCCCGGCGTATTTATc < 1:486625/101‑1 (MQ=37)
ctcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATccc < 2:1772922/101‑1 (MQ=255)
tcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGGTCCG.CCCCCCCCCCCCCCGCGGGTTTTTcccc > 2:4234620/1‑100 (MQ=255)
cccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCaa < 2:6496531/101‑1 (MQ=255)
gggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGaa < 2:5747974/101‑1 (MQ=255)
cgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGaaaaa < 1:3820657/101‑1 (MQ=255)
gggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAagc < 1:4013344/101‑1 (MQ=255)
gccgccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAagcag < 2:4220492/101‑1 (MQ=255)
gccgccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCG.CCCCCGCCCCCCCGGCGTATTTATCCCAAGAAAAagcag < 1:4331316/101‑1 (MQ=255)
gccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCgg > 1:4730649/1‑101 (MQ=255)
gccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCgg < 1:6598738/101‑1 (MQ=255)
cTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCt > 2:5806513/1‑101 (MQ=255)
cTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCt < 2:6419391/101‑1 (MQ=255)
cTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCt > 1:2579813/1‑101 (MQ=255)
cTGATGTGCAAAGCGGTTCCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGCATTTATCCCAAGGAAAAACAGCGGcg > 2:4343516/1‑100 (MQ=25)
tGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCtt < 1:5754576/101‑1 (MQ=255)
tGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCtt > 2:4795522/1‑101 (MQ=255)
tGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCtt < 2:2597716/101‑1 (MQ=255)
gATGTGCAAGGGGGTTTCGCCTCGGCGGTGCGGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTg < 2:2724267/101‑1 (MQ=25)
aTGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGc < 2:3488497/101‑1 (MQ=255)
aTGTGCAAAGCGGTTGCGCCTCGGCGGTGGCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGc < 2:5593536/101‑1 (MQ=25)
tgtgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGcc < 1:4510249/101‑1 (MQ=255)
tgtgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGcc < 2:3705855/101‑1 (MQ=255)
gtgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGccc < 2:4569045/101‑1 (MQ=255)
gtgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGccc < 1:412324/101‑1 (MQ=255)
gtgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGccc < 2:1735096/101‑1 (MQ=255)
gtgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGccc < 2:1445121/101‑1 (MQ=255)
gtgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...AGGGGGGCCG.CCCCCCCCCCCCCCCCGCCTTTTTTCCACGAAAAAACAACGGCTGGccc > 1:6227615/1‑101 (MQ=255)
tgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCG..GGGGGGTCCC.CCCCCCCCCCCCCCCGGGCTTTTTCCCACCAAAAACAACCGGCCTGccc > 1:2812034/1‑101 (MQ=255)
gCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCg < 1:6679262/101‑1 (MQ=255)
cAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGa < 1:1230441/101‑1 (MQ=255)
aaGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAg < 1:2699992/101‑1 (MQ=255)
cGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCGGGGGGGGCCCCC.CCCCCCCCCCCCCCGCGTTTTTCCCACAAAAAAAAACAGCGGC.TGCCCCCAAgc > 1:1787759/1‑100 (MQ=255)
gTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCtt < 2:597194/101‑1 (MQ=255)
gTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCtt < 2:3059095/101‑1 (MQ=255)
gTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCCTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCtt < 2:3454879/101‑1 (MQ=25)
tttCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTg < 2:4005147/101‑1 (MQ=255)
ttCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTTCCCCCGCGGCCttcg > 1:4176471/1‑99 (MQ=21)
tCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGtt < 2:3623453/101‑1 (MQ=255)
tCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGtt < 2:6886017/101‑1 (MQ=255)
cGCCTCGGCGGTGCCGAGGCGACCCTGCG..GGGGGGCCCC.CCCCCCACCCCCCGCGGATTTTTTCCCAAAAAAAACAACGGGCTTGCCCCCAAGCCCTGGtt > 2:835812/1‑101 (MQ=255)
cGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGttt < 1:3431267/101‑1 (MQ=255)
gCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCTTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGtttt > 1:832534/1‑101 (MQ=37)
gCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGtttt < 2:1787695/101‑1 (MQ=255)
tCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGttttgat < 2:1156404/101‑4 (MQ=37)
ccggcggTGCCGAGGCGACCCTGC...GGGGCCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGttttgat < 2:1749330/100‑4 (MQ=37)
ggcggTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATgg < 1:555829/101‑1 (MQ=37)
ggcggTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGAAGCGGCTTGGCCCGAAGGGCTTGTTGTTgtgt > 1:2283164/1‑98 (MQ=25)
gcggTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGc < 2:6227296/101‑1 (MQ=37)
ggTGCCGAGGCGGCCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGcac < 1:5190173/101‑1 (MQ=25)
gTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCCTG.TTTTGATGGcaca > 2:5176785/1‑101 (MQ=25)
gTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCCCAAGGCTCG.TTTTGATGGcaca > 2:2304909/1‑101 (MQ=21)
gTGCCGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCCAAGGCCTTG.TTTTGATGGcgca > 2:6248892/1‑101 (MQ=25)
ccGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGa < 1:4408061/101‑1 (MQ=37)
cGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAgta < 1:4260178/101‑3 (MQ=25)
cGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaa > 1:7119622/1‑101 (MQ=37)
cGAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaa < 1:7060676/101‑1 (MQ=37)
gAGGCGACCCTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaaa < 2:3992000/101‑1 (MQ=37)
gAGGCGACCCTGC...GGGGGCGCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGaaa < 1:3566135/101‑1 (MQ=37)
ccTGC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAAc < 1:2751019/101‑1 (MQ=37)
gC...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCCAAGGCCTTG.TTTTGATGGGACAAGAAAAGCCGAACCG.c > 1:31410/1‑101 (MQ=25)
c...GGGGGCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGGCTTG.TTTTGATCGCACAAAAAAAGCCGAAACggc > 2:3291219/1‑99 (MQ=21)
gggggCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.ccc > 1:4855030/1‑101 (MQ=37)
ggggCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGGACAAGAAACGCCGAACCG.cccc > 2:5186685/1‑101 (MQ=37)
gggCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCCCAAGAAACGCCGAACCG.ccccc < 2:5930044/101‑2 (MQ=37)
gggCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.ccccc < 1:3143140/101‑2 (MQ=37)
gatcTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.ccccc < 2:1005038/98‑2 (MQ=37)
gcgccgcccccGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCctt < 1:2312366/94‑1 (MQ=37)
gCTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCctt < 2:5545759/101‑1 (MQ=37)
cTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCcttt < 1:5806815/101‑2 (MQ=37)
cTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCcttt < 1:835836/101‑2 (MQ=37)
cTCCGCCCCCGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCCAACCG.CCCCcttt > 2:5491341/1‑100 (MQ=37)
tccgcccccGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCctttc < 2:6510797/96‑3 (MQ=37)
tccgcccccGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCctttc < 1:1395103/96‑3 (MQ=37)
tccgcccccGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCctttc < 1:103540/96‑3 (MQ=37)
tCCT.CCCCCCCCCCCCCGGCCTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.CCCCctttc < 2:2283069/101‑3 (MQ=255)
ccgcccccGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCGCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGCCCCCTTTCa < 2:1241733/97‑1 (MQ=37)
ccgcccccGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCG.cccccagatc > 1:1005073/5‑95 (MQ=38)
cccccGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGCCCCCTTTCACCt < 2:6312669/100‑1 (MQ=38)
ccccGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGCCCCCTTTCACCtt < 2:2719504/101‑1 (MQ=38)
|
ACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC...GGGGGCTCCG.CCCCGCACCCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTTGCCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAACCG.CCCCTTTCACCTT > NC_014034/2185751‑2185943
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|