| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,493,971 | Δ1 bp | 2.2% | intergenic (+19/‑223) | RCAP_rcc02319 → / → RCAP_rcc02320 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,493,971 | 0 | G→. | 2.2% | 8.6 ‑1.0 ‑0.0 | 273 | intergenic (+19/‑223) | RCAP_rcc02319/RCAP_rcc02320 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (3/3): ref base (73/194): total (76/197) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.53e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.93e-01 | ||||||||||
Only 100 of 304 total aligned reads displayed.
TGATGGCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.A.GG.GG.GGGCGCTGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAGCAGA > NC_014034/2493876‑2494067
|
gATGGCCGAGCTGCCCCCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGc < 1:5497055/101‑1 (MQ=38)
tGGCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCaa < 1:7097902/101‑1 (MQ=38)
ggCCGAGCTGCCCCCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAg < 1:3650248/101‑1 (MQ=38)
ggCCGAGCTGCCCCCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAg < 1:1848139/101‑1 (MQ=38)
ggCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.CAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAg < 1:3720629/101‑1 (MQ=38)
gCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGc < 1:938437/101‑1 (MQ=38)
gCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGc > 2:6014894/1‑101 (MQ=38)
aGCTGCCCCCCCGCGCGCCGCGTCTGGCTCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGAc < 1:6186800/101‑1 (MQ=37)
gCTGCCCCCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACt < 1:5645808/101‑1 (MQ=37)
gCTGCCCCCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACt < 2:2129100/101‑1 (MQ=37)
gCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACt > 2:5204277/1‑101 (MQ=38)
tGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGTTGGCCCCCGGCCGCAAGCGGACGcc > 2:1009549/1‑101 (MQ=255)
cgCCCCCCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTcc < 2:740598/100‑1 (MQ=25)
gCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCCGCCGCCAGCGGGCTccc > 1:4499020/1‑101 (MQ=38)
cccACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGGATcccc > 1:6489401/1‑101 (MQ=37)
ccccccGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTccccc < 1:4850673/98‑1 (MQ=25)
cgcccGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTcccccc < 1:5211242/99‑1 (MQ=25)
cACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTcccccc < 1:1302290/101‑1 (MQ=37)
cACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTcccccc < 2:5574967/101‑1 (MQ=37)
cccGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTcccccccg > 2:4920816/1‑99 (MQ=25)
ccGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCggg > 2:1593833/1‑101 (MQ=25)
ccGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCggg > 1:1636112/1‑101 (MQ=25)
cgcgcgCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGGGCTGCCCCCCGTCCGCCAGCGGGCTCCCCCCgggg > 2:3345393/1‑100 (MQ=25)
cgcgccCCGCGTCCGCCCCCGCCCCGCGGCTTGCGCGCGGCACGACAGGCC.GAGT.A.A.GGTTG.GGGCGCTTCCCCCCGTCCGCAAGCGGACTCCCCCCGGGa < 2:2284499/101‑1 (MQ=16)
gcgcgcCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGat < 2:1074776/101‑1 (MQ=25)
ccgcGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTg < 2:5425105/101‑1 (MQ=25)
ccgcGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTg < 1:6661287/101‑1 (MQ=25)
ccgcGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGAGATTTg > 1:761342/1‑101 (MQ=25)
ccgcGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCCGGATATTTg > 2:7103003/1‑101 (MQ=25)
cTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCaa < 1:5399307/101‑1 (MQ=25)
cTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCaa < 2:4498781/101‑1 (MQ=25)
cTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCaa > 2:6585872/1‑101 (MQ=25)
cTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCaa > 1:3550791/1‑101 (MQ=25)
tGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAg < 2:1348650/101‑1 (MQ=21)
gCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGTAA.A.GG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGAt > 1:2158011/1‑101 (MQ=21)
cccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATg < 1:6930124/101‑1 (MQ=21)
cccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATg < 2:6415617/101‑1 (MQ=21)
ccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGa < 1:2753346/101‑1 (MQ=21)
aGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCCAGATGaaa > 1:4687584/1‑101 (MQ=21)
aGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaaa < 2:6685182/101‑1 (MQ=21)
aGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaaa < 1:4345290/101‑1 (MQ=21)
aGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaaa < 1:3984449/101‑1 (MQ=21)
gcgcCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAc < 2:2947535/101‑1 (MQ=21)
gcgcCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAc < 2:6926121/101‑1 (MQ=21)
gcggcgGGCGCGCGGCACGACAGGCCGGGGA.A.A.GG.GG.GGGGGCTGCCCCCCGTCCGGCAGCGGGCTCCCCCCCGGCAATTTGCCGCACAAAGAAACCGGaa > 1:1170684/1‑100 (MQ=255)
ggcgggcgCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGc > 1:2034279/1‑101 (MQ=21)
gcgggcgCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGcc < 2:1668214/101‑1 (MQ=21)
gggcgCGCGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCtt < 1:3236547/101‑1 (MQ=21)
gcgcgcGGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTc < 2:1128414/101‑1 (MQ=21)
cgcgcgGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa < 2:1220040/101‑1 (MQ=21)
gcgcgGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCAt < 1:5963658/101‑1 (MQ=21)
cgGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGGTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAACCGATGCATTTCAttct > 2:3292121/1‑98 (MQ=17)
cgGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCtt > 2:4226979/1‑101 (MQ=21)
cgGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCtt < 1:4932642/101‑1 (MQ=21)
cgGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCtt < 1:576379/101‑1 (MQ=21)
cgGCACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCCTCCGCAAGCGGACTCCCCCCGGGATATTTTCAGCAAGATGAAACCCGATGCCTTTCATCtt > 1:2441510/1‑101 (MQ=18)
gcatggcAGGCC.GAGT.ACG.GG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGc < 2:5662156/95‑1 (MQ=17)
cACGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGcc < 1:884545/101‑1 (MQ=21)
cGACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCg < 2:3126064/101‑1 (MQ=21)
gACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGa > 1:967734/1‑101 (MQ=21)
gACAGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGa > 2:6135284/1‑101 (MQ=21)
aGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAat > 1:316536/1‑101 (MQ=21)
aGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAat < 1:4587345/101‑1 (MQ=21)
aGGCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAat > 1:530803/1‑101 (MQ=21)
ggCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAata < 2:2710869/101‑1 (MQ=21)
ggCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAata < 1:3481457/101‑1 (MQ=21)
ggCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAata > 2:6480146/1‑101 (MQ=21)
ggCC.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAata < 2:3722321/101‑1 (MQ=21)
cc.GATT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATc < 2:40144/101‑1 (MQ=18)
cc.GAGT.A.A.GG.GGTGAGCGCTGCCCCCCGTCCGCAAGCGTACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATc < 2:2836554/101‑1 (MQ=21)
c.GAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATcc < 2:4457073/101‑1 (MQ=21)
gAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATccc < 1:2318104/101‑1 (MQ=18)
gAGT.A.AGGG.GG.GGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATccc < 1:1782650/101‑1 (MQ=18)
aaggg.gg.gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgggg < 1:2951550/98‑1 (MQ=255)
aggg.gg.gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggggg > 2:6814091/3‑101 (MQ=255)
aggg.gg.gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggggg > 2:202817/3‑101 (MQ=255)
aggg.gg.gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggggg > 1:1594922/3‑101 (MQ=255)
ggg.gg.gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgggggg > 2:1828193/2‑101 (MQ=255)
ggg.gg.gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATACCCCgggggg < 1:6828304/100‑1 (MQ=255)
gg.gg.gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggggggg > 2:4799099/1‑100 (MQ=255)
g.gg.gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTg < 1:1978697/101‑1 (MQ=255)
g.gg.gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTg < 2:2973957/101‑1 (MQ=255)
g.gg.gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTg < 1:6585162/101‑1 (MQ=255)
gg.gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGa > 2:4706240/1‑101 (MQ=255)
g.gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGaa > 2:1473154/1‑101 (MQ=255)
gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCGCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAAt < 1:3404206/101‑1 (MQ=255)
gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAAt < 1:1026977/101‑1 (MQ=255)
ggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATg < 1:4921060/101‑1 (MQ=255)
gcgcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATgg < 1:6946460/101‑1 (MQ=255)
gcgcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATgg < 2:6960075/101‑1 (MQ=255)
gcgcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTCAATgg < 2:3512697/101‑1 (MQ=255)
cgcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGc < 1:3334951/101‑1 (MQ=255)
gcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCg > 2:5881401/1‑101 (MQ=255)
gcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCg > 2:5334729/1‑101 (MQ=255)
cTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGa < 2:4569864/101‑1 (MQ=255)
cTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGGGAATGGCGa > 1:5416968/1‑101 (MQ=255)
gCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGaag < 1:4131707/101‑3 (MQ=255)
gCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGaag < 2:3645725/101‑3 (MQ=255)
ccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGaagcca < 1:1689703/101‑6 (MQ=255)
ccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGaagcca < 1:6068986/101‑6 (MQ=255)
|
TGATGGCCGAGCTGCCCACCCGCGCGCCGCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCC.GAGT.A.A.GG.GG.GGGCGCTGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAATGGCGAGCAGA > NC_014034/2493876‑2494067
Base quality scores:
ATCG
< 3 ≤
ATCG
< 16 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|