| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,439,791 | Δ1 bp | 5.8% | intergenic (‑94/+69) | RCAP_rcc03240 ← / ← mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,439,791 | 0 | G→. | 5.8% | 30.4 ‑0.9 0.0 | 241 | intergenic (‑94/+69) | RCAP_rcc03240/mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Reads supporting (aligned to +/- strand): new base (5/9): ref base (115/111): total (121/120) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.10e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 317 total aligned reads displayed.
GGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCG > NC_014034/3439691‑3439893
|
ggcTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGAATTTGGGGGAAG.AA.AAAg > 1:5449177/1‑101 (MQ=255)
gcTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGAATTTTGGGGAAG.AT.AAAgg > 1:3785291/1‑101 (MQ=255)
cTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGGAAG.AG.AAAagg > 1:1708139/1‑101 (MQ=39)
cATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGgc < 2:574303/101‑1 (MQ=255)
aTGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGCGATTGGGGGCAA..AT.AAAGGGgct > 1:1067935/1‑101 (MQ=255)
aTGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGAATTTGGGGAAG.AG.AAAgggggg > 2:3106829/1‑99 (MQ=255)
aTGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCCAG.AT.AAAGGGgct > 2:1796819/1‑101 (MQ=255)
aTGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGgct < 1:2247444/101‑1 (MQ=255)
ggcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGCAAG.AT.AAAGGGgctttgct > 1:3264437/1‑101 (MQ=255)
gcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGgctttgctt < 1:298368/101‑1 (MQ=255)
cgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGgctttgcttt < 1:1870942/101‑1 (MQ=255)
cgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGgctttgcttt < 2:4312888/101‑1 (MQ=255)
gACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTTGGGGAAGAAA.AAAGGGggtttgtttt > 2:3660281/1‑101 (MQ=255)
gACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCtttt < 1:19595/101‑1 (MQ=255)
atctcTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCtttt < 2:116294/97‑1 (MQ=255)
cccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTTGGGGAAG.AT.AAAAGGGCTTTGCtttttt > 2:2841439/1‑99 (MQ=255)
cccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTTGGGCAAG.ATAAAAGGGGGTTTGTttttt > 1:1618485/1‑100 (MQ=255)
cccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTAt < 1:873667/101‑1 (MQ=255)
cccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCCCCGGC.GGGGGTATTTGGGGGAAG.AT.AAAGGGGGTTTGGtttttt > 2:4405670/1‑99 (MQ=255)
accTGCACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTAt < 2:1858758/100‑1 (MQ=255)
cTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTagat > 1:116295/1‑98 (MQ=255)
tACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTaagat > 2:1624733/1‑97 (MQ=255)
acacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.ttt < 1:6273711/101‑1 (MQ=255)
cacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGACTTGGGGGAAG.ATAAAAGGGGCTTTG.TTTTTTC.tttt > 1:6379013/1‑100 (MQ=255)
acGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGGAAG.AA.AAAAGGGGTTTTCTTTTTTT.ttttc > 1:2716896/1‑99 (MQ=37)
acGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTTGGGCAAG.AT.AAAGGGGCTTTGCTTTTTTT.ttttc > 2:6041504/1‑99 (MQ=255)
ggCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTGGGGCAAG.AT.AAAGGGGCGTTGCTTTTTTT.TTT..tccc > 2:4556328/1‑101 (MQ=38)
ggCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..cccc < 2:2773400/101‑1 (MQ=255)
gcgcGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCa < 2:446423/101‑1 (MQ=255)
gcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCaaa < 1:372520/101‑1 (MQ=255)
gcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCaaa < 1:4100347/101‑1 (MQ=255)
gcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCaaa < 2:6427916/101‑1 (MQ=255)
cgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAat < 1:2089794/101‑1 (MQ=255)
gACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGGAAG.AT.AAAAGGGCTTTGCTTTTTTCTTTT..CCCCaaaa > 1:5292946/1‑100 (MQ=38)
gACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGGAAG.AT.AAAGGGGCGTTGGTGTTATC.TTT..CCCCCAata > 1:3168713/1‑101 (MQ=38)
aCCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAatat < 2:1019151/101‑1 (MQ=255)
cAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGCAAG.AT.AAAGGGGCGTTGCTTTTTTT.TTT..TCCCAAATAT.cc > 1:2877760/1‑101 (MQ=38)
aGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..TCCCAAATAT.ccc > 2:4193104/1‑101 (MQ=255)
tttCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGGTTTGCTTTTATC.TTT..CCCCACATAT.CCCggg > 1:718392/1‑101 (MQ=255)
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTTGGGGAAG.AT.AAAGGGGCTTTGCTTTTTTT.TTT..TCCCAAATAT.CCCgggggg > 1:6708010/1‑100 (MQ=255)
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGt < 2:6548660/101‑1 (MQ=255)
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGt < 1:6338660/101‑1 (MQ=255)
gAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGCAAG.AT.AAAGGGGGTTTGCTTTTATT.TTT..TCCCCAATAT.CCCggggggg > 1:6885547/1‑99 (MQ=38)
gAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCGAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..TCCCCAATAT.CCCcgggggg > 2:6340805/1‑99 (MQ=38)
aaaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTGGGGGAAG.AA.AAAAGGGCGTTGTTTTTTTT.TTTTCCCCCAAATCC.CCCgggggg > 1:4763077/1‑100 (MQ=255)
aaaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGc < 2:6981681/101‑1 (MQ=255)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..g < 1:3082657/101‑1 (MQ=255)
aGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGAATTTGGGGGAAA.AT.AAAGGGGCTTTGGTTTTTTC.TTT..CCCCCCAAAT.CCCgggggggggg > 1:1255659/1‑96 (MQ=255)
aGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGGCAG.AT.AAAGGGGGTTTTCTTTTTTC.TTT..TCCCCAATAT.CCCGGGGGGGC..GGGGGc > 2:2188756/1‑101 (MQ=37)
aGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTTTC.TTT..CCCCCAATAT.CCCCGGGGGGC..GGGGGc > 1:1124096/1‑101 (MQ=37)
ggAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTTGGGCAAG.AT.AAAGGGGGTTTGCTTTTATC.TTT..CCCCCAATAT.CCCGGGGGGGG..ggggggg > 1:679386/1‑99 (MQ=37)
cGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTTGGGGAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGc.cc > 2:76352/1‑101 (MQ=255)
cGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGc.cc < 1:259569/101‑1 (MQ=255)
ggCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGc.ccc < 1:6053156/101‑1 (MQ=255)
gCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGc.cccc < 1:2764485/101‑1 (MQ=255)
gCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGc.cccc < 2:1481812/101‑1 (MQ=255)
gCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGc.cccc < 1:6231085/101‑1 (MQ=255)
gtgactttcGATGCCTCCGGC.GGGGGTATTTTGGGCAAG.AT.GAA.ACCCATCCCCTTCATC.TTT..CCCCCAAAAT.CCCGGGGGGCCCGGGGGGCAGCGc.cccc > 1:2695008/9‑101 (MQ=25)
ccTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCCcg < 2:1258793/101‑1 (MQ=255)
ccTGCGGCCGATGCCGCCGGC.GGGGATATCTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCCcg < 1:4502904/101‑1 (MQ=255)
tgcctttcGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.GAA.ACCCATCCCTTTCATC.TTG..CCCCAAATAT.CCCGGGGGGCCCGGGGGGCAGCGc.ccccc < 2:5429840/94‑2 (MQ=25)
cTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCCcgc > 2:4124060/1‑101 (MQ=255)
gactttcGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.GAA.ACCCATCCCTTTCATC.TTG..CCCCAAATAT.CCCGGGGGGCCCGGGGGGCAGCGc.cccccc > 2:2715433/7‑99 (MQ=25)
ctttcGATGCCTCCGGC.GGGGATATTNGNGNCAAG.AT.GAA.ACCCATCCCTTTCATC.TTG..CCCCAAATAT.CCCGGGGGGCCCGGGGGGCAGCGc.cccccgcc < 1:4585024/97‑5 (MQ=21)
tttcGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.GAA.ACCCATCCCTTTCATC.TTG..CCCCAAATAT.CCCGGGGGGCCCGGGGGGCAGCGc.cccccgcca < 1:3044469/98‑6 (MQ=25)
tttcGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.GAA.AACCATCCCTTTCATC.TTG..CCCCAAATATCCCCGGGGGCCCG.GGGGGCAGCGc.cccccgccc > 2:5496352/4‑96 (MQ=21)
ggCCGATGCCTCCGGC.GGGGATATTTTGGGGAAG.AT.AAAGGGGCTTTGCTTTTTTC.TTT..CCCCCAATAT.CCCGGGGGGGC..GGGGGCAGAGc.cccccccgcc > 1:5891818/1‑95 (MQ=21)
ggCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.TT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGGGC..GGGGGCAGAGC.CCCcgccgcc > 1:4130178/1‑97 (MQ=255)
ttcGATGCCTCCGGC.GGGGATATTTTGGGCAAG.AT.GAA.ACCCATCCCTTTCATC.TTT..CCCCCAATAT.CCCGGGGGGCC..CGGGGGGGAGCGCCCCCcgcccc > 1:4343352/3‑99 (MQ=21)
gCCGATGCCTCCGGC.GGGGATATTTTGGGGAAA.AT.AAAAGGGGTTTGCTTTTTTT.TTTC.CCCCAAAAAC.CCCGGGGGGGG..GGGGGCGGAGc.cccccccgcc > 2:4715367/1‑95 (MQ=255)
ccGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCCcgccgccac > 2:2957496/1‑95 (MQ=255)
aTGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACggg > 1:387912/1‑100 (MQ=255)
cTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGGGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTccc > 2:5256720/1‑99 (MQ=18)
tCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGGGC..GGGGGCAGAGC.CCC..CGCCGCCACGGGTCAcc > 2:2443791/1‑100 (MQ=18)
ccGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCAcgc > 2:1361743/1‑101 (MQ=255)
ccGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGGTCAcgc > 2:5837980/1‑101 (MQ=255)
ggc.ggGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGGGC..GGGGGCAGAGC.CCC..CGCCGCCACGGGTCAccccg > 1:5523315/1‑101 (MQ=18)
ggggATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGa > 2:1709528/1‑101 (MQ=255)
ggATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGAcc > 2:4834090/1‑101 (MQ=255)
tatTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGtc > 2:7077351/1‑101 (MQ=255)
atTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGtct > 2:672834/1‑101 (MQ=255)
atTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGtct > 2:5963222/1‑101 (MQ=255)
ttGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTcc > 1:5772179/1‑101 (MQ=255)
tGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCCTCTCCg > 2:1943699/1‑101 (MQ=255)
gCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACTGTCTCCGAGGt > 2:1090177/1‑101 (MQ=21)
gCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..ACCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGt > 2:5123991/1‑101 (MQ=25)
cAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTc > 1:1895652/1‑101 (MQ=255)
aaG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCg > 1:350862/1‑101 (MQ=255)
aG.AT.AAAGGGTCTTTGCTTTTATC.TTC..CCCAAAATAC.CCCGGGGGTGC..GGGGGCAGA.C.CCCC.CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGc < 1:4405892/101‑1 (MQ=25)
aG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGc > 2:1436274/1‑101 (MQ=255)
g.AT.AAGGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc > 2:3515738/1‑101 (MQ=255)
g.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc > 1:1366587/1‑101 (MQ=255)
aT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 1:4204189/1‑101 (MQ=255)
aT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 2:3785849/1‑101 (MQ=255)
aaaGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgc > 1:250897/1‑101 (MQ=255)
aaaGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgc > 2:3420106/1‑101 (MQ=255)
aaaGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGGCGCCAgc > 1:6449584/1‑101 (MQ=255)
aaaGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGCGTCGCCAgc > 2:2652390/1‑101 (MQ=255)
aGGTGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCGGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcgc > 1:5020564/1‑101 (MQ=37)
ggggCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGcgcg > 1:147139/1‑101 (MQ=255)
|
GGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAG.AT.AAAGGGGCTTTGCTTTTATC.TTT..CCCCAAATAT.CCCGGGGGTGC..GGGGGCAGAGC.CCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCG > NC_014034/3439691‑3439893
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 26 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|