BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,397,674	+T	1.1%	coding (1556/1578 nt)	RCAP_rcc01307 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,397,674	1	.→T	1.1%	7.1 ‑2.0 ‑0.1	354	coding (1556/1578 nt)	RCAP_rcc01307	hypothetical protein
Reads supporting (aligned to +/- strand): new base (0/4): ref base (149/201): total (149/205)
Fisher's exact test strand distribution p-value = 1.42e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.77e-01

Only 100 of 375 total aligned reads displayed.


CCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGCGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCC  >  NC_014034/1397574‑1397774


cccccGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTc                                                                                                         <  1:140131/101‑1 (MQ=255)


  cccGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.Cg                                                                                                      <  1:1140989/101‑1 (MQ=255)


  cccGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.Cg                                                                                                      <  2:5619986/101‑1 (MQ=255)


  cccGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.Cg                                                                                                      <  2:2619479/101‑1 (MQ=255)


    cgcgGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGCGGATCGAACCTCCAGAGTTC.CGGt                                                                                                    >  2:5705892/1‑101 (MQ=255)


     gcgGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTc                                                                                                   <  2:4619210/101‑1 (MQ=255)


      cgGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCt                                                                                                  >  2:3502280/1‑101 (MQ=255)


      cgGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCt                                                                                                  <  1:2363436/101‑1 (MQ=255)


      cgGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCt                                                                                                  >  1:584290/1‑101 (MQ=255)


       gggggCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCtt                                                                                                 >  2:7000925/1‑101 (MQ=255)


        ggggCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTtg                                                                                                <  2:3768475/101‑1 (MQ=255)


        ggggCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTtg                                                                                                <  1:4463085/101‑1 (MQ=255)


         gggCGGGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTtgt                                                                                               <  2:1979374/101‑1 (MQ=255)


          ggCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTtgtt                                                                                              <  1:4999007/101‑1 (MQ=255)


             gTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTtgttctg                                                                                           >  1:4246990/1‑101 (MQ=255)


              tGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTtgttctgt                                                                                          >  1:3188540/1‑101 (MQ=255)


              tGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTtgttctgt                                                                                          >  2:1785037/1‑101 (MQ=255)


              tGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTtgttctgt                                                                                          <  2:6286712/101‑1 (MQ=255)


               ggATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTtgttctgtt                                                                                         <  1:3089750/101‑1 (MQ=255)


               ggATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTtgttctgtt                                                                                         >  1:4666042/1‑101 (MQ=255)


               ggATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGNTC.CGGTCTtgttctgtt                                                                                         >  2:1309905/1‑101 (MQ=255)


                gATCGAAACATCCGCGGATCGGCGTGCCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTtgttctgttc                                                                                        <  1:962679/101‑1 (MQ=255)


                gATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTtgttctgttc                                                                                        >  1:6934899/1‑101 (MQ=255)


                 aTCGAACCATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTc.c                                                                                      <  2:1597227/101‑1 (MQ=255)


                   cGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.Cgg                                                                                    >  1:374533/1‑101 (MQ=255)


                   cGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.Cgg                                                                                    >  1:5896181/1‑101 (MQ=255)


                    gAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGt                                                                                   >  2:3010345/1‑101 (MQ=255)


                    gAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGt                                                                                   >  2:2186397/1‑101 (MQ=255)


                    gAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTATGTTC.CGGt                                                                                   >  2:5358589/1‑101 (MQ=255)


                     aaaCATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTa                                                                                  <  1:2147825/101‑1 (MQ=255)


                        ctcccGCGGATCGGCGTGCCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACa                                                                               <  2:4683767/98‑1 (MQ=255)


                        cacccGCGGATCGGCGTGCCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACa                                                                               <  2:5267322/98‑1 (MQ=255)


                        cATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACa                                                                               <  2:4920405/101‑1 (MQ=255)


                        cATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACa                                                                               >  2:2647486/1‑101 (MQ=255)


                           ccGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGt                                                                            <  2:1353467/101‑1 (MQ=255)


                            cgccGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTc                                                                           <  2:1274069/101‑1 (MQ=255)


                               ggATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCt                                                                        <  2:6234386/101‑1 (MQ=255)


                                gATCGGCGTGCCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.c                                                                      <  2:7114760/101‑1 (MQ=255)


                                  tCGGCGTGACCCGCCCCGCCCATCGGTCGCTCGCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccc                                                                    <  1:3634146/101‑1 (MQ=255)


                                   cGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.cccc                                                                   <  1:405987/101‑1 (MQ=255)


                                    ggCGTGCCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccccc                                                                  <  1:874756/101‑1 (MQ=255)


                                    ggCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTG.CGGTAACAGGTCGCT.ccccc                                                                  >  1:7014287/1‑101 (MQ=255)


                                    ggCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccccc                                                                  <  1:1751239/101‑1 (MQ=255)


                                    ggCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccccc                                                                  >  2:4268260/1‑101 (MQ=255)


                                    ggCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.ccccc                                                                  >  2:1115613/1‑101 (MQ=255)


                                     gCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.cccccc                                                                 <  1:7056114/101‑1 (MQ=255)


                                      cgggACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCcg                                                                <  2:3188424/98‑1 (MQ=255)


                                       gTGCCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCcgc                                                               <  1:6715938/101‑1 (MQ=255)


                                       gTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCcgc                                                               >  1:6614018/1‑101 (MQ=255)


                                       gTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCcgc                                                               >  1:837696/1‑101 (MQ=255)


                                          aCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCggg                                                            <  1:2890876/101‑1 (MQ=255)


                                             cgccccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGgggc                                                         <  1:378533/101‑1 (MQ=255)


                                             cgccccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGgggc                                                         <  1:1936107/101‑1 (MQ=255)


                                             cgccccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGgggc                                                         <  1:3472040/101‑1 (MQ=255)


                                              gccccgcccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGggcg                                                        <  2:3416912/101‑1 (MQ=255)


                                                   ccccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGCCGCT.CCCCCCGCGGGGGCGTGGAt                                                   <  2:4732715/100‑1 (MQ=255)


                                                     ccATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCg                                                 <  2:5081150/101‑1 (MQ=255)


                                                      cATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGa                                                >  2:755557/1‑101 (MQ=255)


                                                        tCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGaaa                                              >  2:485571/1‑101 (MQ=255)


                                                          ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACt                                            <  1:1298730/101‑1 (MQ=255)


                                                              gCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTc                                        >  1:4557253/1‑101 (MQ=255)


                                                              gCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTc                                        <  2:1226848/101‑1 (MQ=255)


                                                              gCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTc                                        <  2:4422404/101‑1 (MQ=255)


                                                               cTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCt                                       >  2:6437944/1‑101 (MQ=255)


                                                                tCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTg                                      >  1:3576404/1‑101 (MQ=255)


                                                                tCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTg                                      <  2:1685885/101‑1 (MQ=255)


                                                                 ccccccGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGa                                     >  1:2644916/1‑101 (MQ=255)


                                                                   ccccGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGAcg                                   >  1:5493098/1‑101 (MQ=255)


                                                                    cccGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGGTTGC..GTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACATGGCtatggc                                  <  1:4369286/101‑6 (MQ=0)


                                                                    cccGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGGTTGC..GTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACATGGCtatggc                                  <  1:6555391/101‑6 (MQ=0)


                                                                     ccGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGAcgcg                                 <  1:299066/101‑1 (MQ=255)


                                                                     ccGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGGTTGC..GTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACATGGCtatggcg                                 <  2:661998/101‑7 (MQ=0)


                                                                        cgGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtc                              <  1:5345932/101‑1 (MQ=255)


                                                                        cgGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtc                              >  2:5873394/1‑101 (MQ=255)


                                                                        cgGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtc                              >  1:2774687/1‑101 (MQ=255)


                                                                         gggggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtca                             >  2:5216823/1‑101 (MQ=255)


                                                                         gggggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtca                             <  2:361841/101‑1 (MQ=255)


                                                                         gggggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtca                             >  2:2881933/1‑101 (MQ=255)


                                                                           gggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatc                           <  1:2485641/101‑1 (MQ=255)


                                                                           gggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatc                           <  1:6779603/101‑1 (MQ=255)


                                                                            ggCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCtcatca                          <  1:521302/101‑1 (MQ=255)


                                                                              cGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGc                        <  1:5784128/101‑1 (MQ=255)


                                                                              cGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGc                        <  1:6207648/101‑1 (MQ=255)


                                                                               gTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCa                       >  1:5917055/1‑101 (MQ=255)


                                                                                   aTCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTc                   <  1:1608279/101‑1 (MQ=255)


                                                                                   aTCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTc                   <  1:2400040/101‑1 (MQ=255)


                                                                                    tCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCa                  <  2:5312141/101‑1 (MQ=255)


                                                                                     cGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCaa                 <  2:6749551/101‑1 (MQ=255)


                                                                                      gAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAg                <  2:3978189/101‑1 (MQ=255)


                                                                                        aaCTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGAt              <  1:1024066/101‑1 (MQ=255)


                                                                                          cTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTc            <  2:4564461/101‑1 (MQ=255)


                                                                                          cTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTc            <  2:88812/101‑1 (MQ=255)


                                                                                           tACAGAGTTC.CGGTCTTGTTGTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCa           >  2:2217393/1‑101 (MQ=255)


                                                                                            aCAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAg          >  1:797737/1‑101 (MQ=255)


                                                                                              agagTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCTCCCCCCCGCGGGGGGGTGGATCGAAACTTGTCTGCCGCGCCCATCAGCCCGTCACAATTCAgc         >  2:6008922/1‑100 (MQ=255)


                                                                                               gagTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCg       >  2:51760/1‑101 (MQ=255)


                                                                                               gagTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCg       >  1:6396200/1‑101 (MQ=255)


                                                                                                agTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGc      >  2:4117865/1‑101 (MQ=255)


                                                                                                   tC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcc   <  1:4821680/101‑1 (MQ=255)


                                                                                                   tC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTcc   <  1:2243657/101‑1 (MQ=255)


CCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACAGAGTTC.CGGTCTTGTTCTGTTC.CGGTAACAGGTCGCT.CCCCCCGCGGGCGCGTGGATCGAAACTTGTCTGACGCGCTCATCAGCACGTCAAGATTCAGTCGCTCCC  >  NC_014034/1397574‑1397774

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 30 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG