Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,165,872 +C 100% intergenic (‑177/‑207) RCAP_rcc02007 ← / → tig phage integrase/trigger factor

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,165,8721.→C100.0% 905.3 240intergenic (‑177/‑207)RCAP_rcc02007/tigphage integrase/trigger factor
Reads supporting (aligned to +/- strand):  new base (119/121):  ref base (0/0):  total (119/121)

Only 100 of 269 total aligned reads displayed.

GGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.T.CT.CTG..CCTG.CCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGAAAA  >  NC_014034/2165777‑2165955
                                                                                                     |                                                                                   
ggcgTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTG.ccc                                                                                  >  1:1959575/1‑101 (MQ=255)
ggcgTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTG.ccc                                                                                  <  1:2618243/101‑1 (MQ=255)
gatcttGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTG.ccc                                                                                  <  1:4952204/97‑1 (MQ=255)
 gcgTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTG.cccc                                                                                 <  1:706137/101‑2 (MQ=255)
  cgTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TACT.CTGC.CCTG.ccccg                                                                                >  2:5856846/1‑99 (MQ=255)
   gTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTG.ccccgc                                                                               >  1:5213274/1‑98 (MQ=255)
   gTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTG.ccccgc                                                                               >  2:4902171/1‑98 (MQ=255)
     tGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTG.ccccgcgc                                                                             >  1:4111082/1‑96 (MQ=255)
     tGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTG.ccccgcgc                                                                             >  2:4731097/1‑96 (MQ=255)
      gagaTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCt                                                                             >  2:925409/1‑101 (MQ=255)
      gagaTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCt                                                                             >  2:4544731/1‑101 (MQ=255)
       agaTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTg                                                                            <  1:3494606/101‑1 (MQ=255)
        gaTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGc                                                                           <  1:4688361/101‑1 (MQ=255)
        gaTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGc                                                                           >  2:1581415/1‑101 (MQ=255)
        gaTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGc                                                                           >  1:4026705/1‑101 (MQ=255)
         aTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGcc                                                                          <  1:5879275/101‑1 (MQ=255)
           ttCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGt                                                                        <  1:6750827/101‑1 (MQ=255)
                ggggCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCgg                                                                   >  2:1364443/1‑101 (MQ=255)
                ggggCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCgg                                                                   >  1:3188345/1‑101 (MQ=255)
                ggggCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCgg                                                                   <  2:3048789/101‑1 (MQ=255)
                ggggCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCgg                                                                   <  1:568125/101‑1 (MQ=255)
                  ggCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCgggg                                                                 <  1:2026123/101‑1 (MQ=255)
                  ggCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCgggg                                                                 <  1:215023/101‑1 (MQ=255)
                   gcgcAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGc                                                                <  1:6599358/101‑1 (MQ=255)
                    cgcAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCg                                                               >  1:6637723/1‑101 (MQ=255)
                     gcAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCgt                                                              >  1:1674667/1‑101 (MQ=255)
                      cAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCgtc                                                             <  1:3404932/101‑1 (MQ=255)
                      cAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCgtc                                                             >  2:5883737/1‑101 (MQ=255)
                       agcgTCAACCTGAGACGGCATGCAACACGGCACTGGAGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCggct                                                            >  2:5764066/4‑101 (MQ=255)
                       agagTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCgtct                                                            >  2:4515021/1‑101 (MQ=255)
                       agagTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCgtct                                                            <  1:113588/101‑1 (MQ=255)
                        gagTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCgtctg                                                           <  2:2389691/101‑1 (MQ=255)
                         agTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCgtctgt                                                          <  1:2703606/101‑1 (MQ=255)
                          gTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCgtctgtc                                                         >  2:4076462/1‑101 (MQ=255)
                            cAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGtctgtctg                                                       <  2:693046/101‑1 (MQ=255)
                               ccTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGc                                                    <  1:3775679/101‑1 (MQ=255)
                                 tGAGACGGCATGCAACACGGCCCTGGTGGCGACCACCGGGACCATCTGACCTT.T.CTCCTGCCCCGG.CCCGCGCTGCCGGCGCGGGTCtgctgtctcgtgcg                                                  >  2:5713856/1‑95 (MQ=255)
                                  gagaCGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTTACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGaa                                                 <  2:661644/101‑1 (MQ=255)
                                  gagaCGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGaa                                                 >  2:3579010/1‑101 (MQ=255)
                                  gagaCGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGaa                                                 >  1:4180112/1‑101 (MQ=255)
                                   agaCGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAAt                                                <  2:145910/101‑1 (MQ=255)
                                    gaCGGCATGCAACACGGCACTGGTGCAGACCGCCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATc                                               <  1:4572227/101‑1 (MQ=255)
                                    gaCGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATc                                               <  2:1493482/101‑1 (MQ=255)
                                    gaCGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATc                                               <  1:985491/101‑1 (MQ=255)
                                     aCGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCt                                              <  1:247830/101‑1 (MQ=255)
                                       ggCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCttt                                            <  1:4437890/101‑1 (MQ=255)
                                       ggCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCttt                                            <  2:326825/101‑1 (MQ=255)
                                        gCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCtttt                                           >  2:5536353/1‑101 (MQ=255)
                                        gCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCtttt                                           >  1:4234511/1‑101 (MQ=255)
                                         cATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTc                                          <  2:2720595/101‑1 (MQ=255)
                                          aTGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCg                                         >  2:863577/1‑101 (MQ=255)
                                          aTGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCg                                         >  1:6916345/1‑101 (MQ=255)
                                          aTGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCg                                         <  1:4068726/101‑1 (MQ=255)
                                           tGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGa                                        >  1:1876369/1‑101 (MQ=255)
                                            gCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGac                                       >  2:5304171/1‑100 (MQ=255)
                                             cagcacGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATc                                      >  1:4899432/4‑101 (MQ=255)
                                             cAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATc                                      >  1:1257046/1‑101 (MQ=255)
                                             cAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATc                                      >  1:4882949/1‑101 (MQ=255)
                                             cAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGCGCGTCTGTCTGGGCGAACCTTTTCGATc                                      >  2:6978377/1‑101 (MQ=255)
                                              aaCACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCt                                     >  1:5392643/1‑101 (MQ=255)
                                              aaCACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCt                                     >  1:1109155/1‑101 (MQ=255)
                                               acacGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCtt                                    >  2:3856686/1‑101 (MQ=255)
                                                 acGGCACTGGTGCAGACCACCCGCACCATCTGTCCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTc                                  <  1:3634996/101‑1 (MQ=255)
                                                 acGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTc                                  <  2:194223/101‑1 (MQ=255)
                                                 acGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTc                                  <  2:6143034/101‑1 (MQ=255)
                                                 acGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTc                                  <  2:376794/101‑1 (MQ=255)
                                                   ggCACTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTg                                <  2:1276698/101‑1 (MQ=255)
                                                     cACCGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGcc                              >  2:2577219/1‑101 (MQ=255)
                                                      aCTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCcg                             >  1:6003046/1‑101 (MQ=255)
                                                       cTGGTGCAGACCCCCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCcgc                            <  1:2303930/101‑1 (MQ=255)
                                                       cTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCcgc                            >  2:792471/1‑101 (MQ=255)
                                                       cTGGTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCcgc                            <  2:1827088/101‑1 (MQ=255)
                                                         ggTGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCgcgc                          >  2:4938754/1‑101 (MQ=255)
                                                           tGCAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCg                        <  2:5396597/101‑1 (MQ=255)
                                                            gCAGACCCCCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCgg                       <  2:4229034/101‑1 (MQ=255)
                                                             cAGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCggg                      >  2:5006357/1‑101 (MQ=255)
                                                              aGACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGa                     >  1:2953956/1‑101 (MQ=255)
                                                               gACCACCCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGAc                    <  1:6452294/101‑1 (MQ=255)
                                                                accaccCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGAcc                   <  1:2550201/101‑1 (MQ=255)
                                                                accaccCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGAcc                   <  2:3223515/101‑1 (MQ=255)
                                                                 ccaccCGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCg                  <  2:1774003/101‑1 (MQ=255)
                                                                  caccCGCCCCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCAAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGa                 <  1:1496370/101‑1 (MQ=255)
                                                                    ccgatctcATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGaaa               <  2:5072419/94‑1 (MQ=255)
                                                                    cccGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGaaa               >  1:448530/1‑101 (MQ=255)
                                                                    cccGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGaaa               <  2:4163035/101‑1 (MQ=255)
                                                                    cccGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGaaa               <  1:4612468/101‑1 (MQ=255)
                                                                    accgagccATCTGCCCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGaaa               <  1:6156913/95‑1 (MQ=255)
                                                                     ccGCACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGaaaa              >  1:5478328/1‑101 (MQ=255)
                                                                        cACCATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACgg           >  2:1232143/1‑101 (MQ=255)
                                                                           cATCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGccc        >  1:949875/1‑101 (MQ=255)
                                                                            aTCTGACCTTCC.CT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCg       <  2:286990/101‑1 (MQ=255)
                                                                             tCTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCgg      >  2:3434748/1‑101 (MQ=255)
                                                                              cTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAACACGGCCCGGa     >  2:1706310/1‑101 (MQ=255)
                                                                              cTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGa     >  1:1404337/1‑101 (MQ=255)
                                                                              cTGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGa     >  1:5702325/1‑101 (MQ=255)
                                                                               tGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGaa    >  2:5622961/1‑101 (MQ=255)
                                                                               tGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGaa    >  2:4389042/1‑101 (MQ=255)
                                                                               tGACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGaa    <  1:3309949/101‑1 (MQ=255)
                                                                                gACCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGaaa   <  2:6667197/101‑1 (MQ=255)
                                                                                 aCCTT.TCCT.CTGC.CCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGaaaa  >  2:2247026/1‑101 (MQ=255)
                                                                                                     |                                                                                   
GGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTT.T.CT.CTG..CCTG.CCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGAAAA  >  NC_014034/2165777‑2165955

Base quality scores:  ATCG  < 3 ≤  ATCG  < 22 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG