Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 2,486,428 | +G | 98.5% | intergenic (‑56/+138) | RCAP_rcc02312 ← / ← soxG | hypothetical protein/sarcosine oxidase subunit gamma |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 2,486,428 | 1 | .→G | 98.5% | 5.2 0.0 ‑0.9 | 331 | intergenic (‑56/+138) | RCAP_rcc02312/soxG | hypothetical protein/sarcosine oxidase subunit gamma |
Reads supporting (aligned to +/- strand): new base (169/157): ref base (3/2): total (172/159) | ||||||||||
Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.36e-01 |
Only 100 of 387 total aligned reads displayed.
ATTGTTCTTGTCGGGCCGCGCGCCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AA.GGGGCGCTGCCCCTCTCTT.G.CCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGG > NC_014034/2486328‑2486525
|
cttGTTCTTGTCGGGCCGCGCGCCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.Gaa.aa < 2:958506/100‑1 (MQ=255)
aTTGTTCTTGTCGGGCCGCGCGCCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.Gaa.aa < 2:1283126/101‑1 (MQ=255)
ttCTTGTCGGGCCGCGCGCCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AA.gggg > 1:4421969/1‑101 (MQ=255)
ttGTCGGGCCGCGCGCCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AA.gggggcg > 1:1632509/1‑98 (MQ=255)
cGGGCCGCGCGCCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGc < 1:6890230/101‑1 (MQ=255)
gggCCGCGCGCCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGcc > 2:1985937/1‑101 (MQ=255)
ggCCGCGCGCCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGccc < 1:4779511/101‑1 (MQ=255)
gCCGCGCGCCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGcccc > 1:6220403/1‑101 (MQ=255)
gcgggcCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGCGGAA.AG.GGGGCGCTGccccctc > 1:5604037/1‑98 (MQ=255)
gcgcgcCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGcccccgc > 2:4623115/1‑98 (MQ=255)
cgcgcCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGccccctct < 1:4057167/101‑5 (MQ=255)
gcgcCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCtt < 1:3676689/101‑1 (MQ=255)
cgcCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTt.g < 1:6584304/101‑1 (MQ=255)
cgcCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTt.g < 2:5928495/101‑1 (MQ=255)
cgcCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTt.g < 2:6453861/101‑1 (MQ=255)
tctccGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTt.g.cc < 1:3940996/98‑1 (MQ=255)
cccccGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTt.g.cc < 2:3301547/101‑1 (MQ=255)
ccccGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTt.g.ccc > 1:5811004/1‑100 (MQ=255)
ccccGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTt.g.ccc > 2:418647/1‑100 (MQ=255)
cccGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTt.g.ccct < 1:3459641/101‑3 (MQ=255)
cccGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTt.g.ccct < 1:6079832/101‑3 (MQ=255)
cccGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTt.g.ccct < 2:2468160/101‑3 (MQ=255)
ccGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTt.g.ccaga > 2:3940821/1‑98 (MQ=255)
gATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCg > 1:663660/1‑101 (MQ=255)
gATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCg < 1:1495319/101‑1 (MQ=255)
gATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCg > 2:3605849/1‑101 (MQ=255)
ttCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGc > 1:2872845/1‑101 (MQ=38)
cGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCaa < 2:5843785/101‑1 (MQ=38)
gAATAGTCCATGGTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTG.GCCCTGCCGGGCAAg > 2:5201281/1‑101 (MQ=255)
gAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAg > 2:3386756/1‑101 (MQ=38)
gAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAg > 1:881338/1‑101 (MQ=38)
aaTAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGt > 2:3712636/1‑101 (MQ=38)
aTAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTc > 1:3577039/1‑101 (MQ=38)
aaGTCCATGCTGCATCTCCTTTGCCTTCGATCTCCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCa < 1:5719673/100‑1 (MQ=37)
aGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCAc > 1:4283124/1‑101 (MQ=38)
tCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCAccc < 2:4413661/101‑1 (MQ=37)
cATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTTGG.CCTGCCGGGCAAGTCAccccc > 2:1460063/1‑101 (MQ=38)
cATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCAccccc < 1:2221366/101‑1 (MQ=37)
cATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCAccccc < 1:2456762/101‑1 (MQ=37)
aTGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCg > 1:204910/1‑101 (MQ=37)
aTGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCg > 1:6486935/1‑101 (MQ=37)
aTGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCg > 2:6182228/1‑101 (MQ=37)
tGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGat < 2:1872222/101‑1 (MQ=37)
aTCGCCTTTGCCTTAGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATAtt < 1:574577/101‑1 (MQ=25)
ctcCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCa < 2:2829070/101‑1 (MQ=37)
tcCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCAt < 1:2147125/101‑1 (MQ=37)
ccTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATg < 2:3093439/101‑1 (MQ=37)
ccTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATg > 2:6747306/1‑101 (MQ=37)
tttGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGc > 1:2976905/1‑101 (MQ=37)
ttGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCa > 2:5680016/1‑101 (MQ=37)
ttGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGCATATTCATGGCa > 1:7081129/1‑101 (MQ=37)
tGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCaa > 2:1561678/1‑101 (MQ=37)
tGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCaa < 1:5265818/101‑1 (MQ=37)
tGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGAAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCaa > 1:5018100/1‑101 (MQ=25)
gCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAg > 1:1949021/1‑101 (MQ=37)
gCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAg > 2:6911239/1‑101 (MQ=37)
gCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAg < 1:1808072/101‑1 (MQ=37)
gCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAg > 1:1545497/1‑101 (MQ=37)
gCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAg > 2:5066914/1‑101 (MQ=37)
gCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAg < 2:4820672/101‑1 (MQ=37)
gCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCACC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAg < 1:2560318/101‑1 (MQ=255)
cTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGAt < 2:1632448/101‑1 (MQ=37)
ttCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATg < 2:4349129/101‑1 (MQ=37)
ttCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATg < 1:3841432/101‑1 (MQ=37)
tCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAACAG.GGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGa < 1:6273220/101‑1 (MQ=25)
tCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGa < 1:3303784/101‑1 (MQ=37)
cGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGaa > 2:3053982/1‑101 (MQ=37)
gATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGCGCAAGTCACCCCCGGGATATTCATGGCAAGATGAag > 1:6384415/1‑101 (MQ=37)
aTCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAagg > 1:3096064/1‑101 (MQ=37)
cTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAaggag > 1:4649582/1‑101 (MQ=25)
cTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAaggag > 2:5571947/1‑101 (MQ=25)
gCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGc > 1:5403900/1‑101 (MQ=25)
cGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCg > 1:5988286/1‑101 (MQ=25)
aaGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGTAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGtt > 2:1732591/1‑101 (MQ=25)
aaGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGtt < 2:4939879/101‑1 (MQ=37)
aaGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGtt > 1:6965411/1‑101 (MQ=25)
aGCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGttt > 1:5112095/1‑101 (MQ=25)
gCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTc < 1:4893379/101‑1 (MQ=25)
gCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTc < 2:6467793/101‑1 (MQ=25)
gCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTc < 2:3846497/101‑1 (MQ=25)
gCCCGGCCGCAAGGCAAGC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTc < 2:7103357/101‑1 (MQ=25)
gcaaggcaagC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGcc < 1:6799818/101‑1 (MQ=25)
caaggcaagC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGCTATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCa > 1:1054983/1‑101 (MQ=21)
agggcaggG.GAA.AG.GGGGCGCTGCCCC.CTCTTGG.CCTTCCGGGGCAGTCCCCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATa < 1:418659/99‑1 (MQ=18)
aaggcaagC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGGTATTCATGGCAAGATGAAGATGGCGTGTTTCATCTTGCCAt > 2:7045759/1‑101 (MQ=21)
aggcaagC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATa < 2:1837205/101‑1 (MQ=25)
aggcaagC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATa < 1:644537/101‑1 (MQ=25)
caagC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAat < 2:881314/101‑1 (MQ=21)
caagC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAat < 2:2581331/101‑1 (MQ=25)
caagC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAat < 2:5742140/101‑1 (MQ=25)
aagC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAata > 1:1344833/1‑101 (MQ=21)
agC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAatat < 1:2600687/101‑1 (MQ=21)
agC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAatat < 1:4467148/101‑1 (MQ=21)
gC.GAA.AAGGGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATc < 2:2266455/101‑1 (MQ=21)
cgaaa.ag.GGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATcc > 1:3237928/4‑101 (MQ=21)
aaa.ag.GGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCg < 1:1883836/100‑1 (MQ=21)
aaa.ag.GGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCg < 1:1218398/100‑1 (MQ=21)
aaa.ag.GGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCg > 2:2773222/2‑101 (MQ=21)
aaa.ag.GGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCg > 2:3977596/2‑101 (MQ=21)
aa.ag.GGGGCGCTGCCCC.CTCTT.GCCCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCgg < 1:737758/101‑1 (MQ=21)
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ATTGTTCTTGTCGGGCCGCGCGCCCCCGGATTTCGAATAGTCCATGCTGGATCTCCTTTGCCTTCGATCTGCGGCAAGCCCGGCCGCAAGGCAAGC.GAA.AA.GGGGCGCTGCCCCTCTCTT.G.CCTGCCGGGCAAGTCACCCCCGGGATATTCATGGCAAGATGAAGGAGGCGTGTTTCATCTTGCCATAAATATCCCGG > NC_014034/2486328‑2486525
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 23 ≤
ATCG
< 31 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|