| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,577,283 | +G | 95.5% | intergenic (+205/‑224) | fdx → / → purU | ferredoxin VI/formyltetrahydrofolate deformylase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,577,283 | 1 | .→G | 95.5% | 13.4 ‑4.0 ‑1.6 | 156 | intergenic (+205/‑224) | fdx/purU | ferredoxin VI/formyltetrahydrofolate deformylase |
| Reads supporting (aligned to +/- strand): new base (111/38): ref base (2/5): total (113/43) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.75e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.70e-02 | ||||||||||
Only 100 of 199 total aligned reads displayed.
CGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.GGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAA > NC_014034/2577183‑2577378
|
cGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTc.c < 1:6894536/101‑1 (MQ=255)
cGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTc.c < 1:895536/101‑1 (MQ=255)
cGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTc.c < 2:4264400/101‑1 (MQ=255)
ggCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.g < 2:5144146/101‑1 (MQ=255)
ggCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.g < 2:2922217/101‑1 (MQ=255)
tcGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.gg < 1:4603820/100‑1 (MQ=255)
gCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.gg > 1:5579456/1‑101 (MQ=255)
gCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.gg < 2:4481410/101‑1 (MQ=255)
cGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.ggg < 2:3266681/101‑1 (MQ=255)
cGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.ggg > 1:2032712/1‑101 (MQ=255)
cGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.ggg > 1:5481087/1‑101 (MQ=255)
cGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.gga > 2:4603581/1‑100 (MQ=255)
gTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.gggg < 2:5962730/101‑1 (MQ=255)
aTTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.gggggc < 1:6363031/101‑3 (MQ=255)
aTTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.gggggc > 2:6415270/1‑99 (MQ=255)
aTTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.gggggc < 2:709341/101‑3 (MQ=255)
aTTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.gggggc > 1:240172/1‑99 (MQ=255)
aTTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.gggggc > 1:2322017/1‑99 (MQ=255)
tttGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.gggggcg > 2:1972758/1‑98 (MQ=255)
gCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.Ag > 1:1572294/1‑101 (MQ=255)
cACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGc > 2:3938628/1‑101 (MQ=255)
aCCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGcc < 2:5352737/101‑1 (MQ=255)
cAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGcccc > 1:3187528/1‑101 (MQ=255)
ggAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCcg < 1:3490182/101‑1 (MQ=255)
gAAAAGCCAAGGCCGCCCCCGGCAGGACCG.AAGGCCTCAGGCCCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCcgg < 2:4734838/101‑1 (MQ=25)
gAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCcgg > 1:2595392/1‑101 (MQ=255)
aaaaGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCcggc < 2:5807730/101‑1 (MQ=255)
aaagccaaagccGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCcggcg > 2:5916928/1‑101 (MQ=255)
aagccaaagccGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCcggcgg > 2:5020847/1‑101 (MQ=255)
aagccaaagccGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCcggcgg > 2:4837011/1‑101 (MQ=255)
gccaaagccGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCgggg > 1:3352964/1‑100 (MQ=255)
ccaaagccGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCggggg > 1:1042050/1‑99 (MQ=255)
aaagccGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGc > 1:218907/1‑101 (MQ=255)
aggccGCCCCGGGCGGGCCCG..AGGCCCCCGGGCCCCGGGCCCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTCGG.GGGG.CGG.AGCCCCCGGCGGGTCGcc < 1:5937723/99‑1 (MQ=9)
gTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGCGGGCggggg > 1:6950024/1‑100 (MQ=25)
ccccGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGGCGCCGGGGCGa > 1:4289737/1‑101 (MQ=255)
ccGGCCGGGCCGAAAGGCCCCAGGACCCGGGG.CCCC.TTTTACTTTGCCAAAATTTTCCCGGGG.GCC.C.GGGGCCGG.AGCCCCCGGCGGGCCGCCGGGGGGaa > 2:2658349/1‑101 (MQ=16)
ggcagacacG.AAGGCCTCCGGCCCCCGGC.CCCT.TTTTCTTTGCCCCAAATTCTCCCGGGGTGCG.G.GGGG.GGG.CGCCCCGGGCGGGTCGCCGGGGCGAAGcc < 2:218904/93‑1 (MQ=255)
gCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCcg > 2:6585492/1‑101 (MQ=255)
cAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCcgc > 1:4101921/1‑101 (MQ=255)
ggggccG.AAGGCCTCAGGCCCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCcgcg < 1:2754950/97‑1 (MQ=21)
aGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGAGG.GACAG.GGGG.CGG.AGCCACCGGCGGGTAGCCGGGGCGAAGCagcg > 2:1233288/1‑101 (MQ=37)
aCCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCgcggcg > 2:6717699/1‑101 (MQ=255)
cG.ACGGCCTCAGGCGCCCGGG.CCCC.TTTTCTCTTGCCCAAAGTGTCCGGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGaa < 1:6526860/101‑1 (MQ=18)
cG.AAGGCCTCAGGACCCGGGG.CCCT.TTTTATCTTGCCCAAAATACCCCGGGG.GTCGG.GGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGaa < 2:1572234/101‑1 (MQ=21)
g.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGaaa > 1:1403543/1‑101 (MQ=255)
g.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGaaa > 1:1749319/1‑101 (MQ=255)
g.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGaaa < 1:3938803/101‑1 (MQ=255)
aaGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAAt > 1:3740689/1‑101 (MQ=255)
aaGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGCCGGGTCGCCGGGGCGAAGCCGCGGAGCAAt > 2:5094332/1‑101 (MQ=25)
aGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATc < 2:471133/101‑1 (MQ=255)
ggCCTCAGG.CCCCGGG.CCCCTTTTTATCTTGCCAAAAATCTCCCGGGG.GGCGG.GGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcc < 1:2423791/101‑1 (MQ=18)
tCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggc < 2:3111856/101‑1 (MQ=255)
cAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCCGCGAAAAcccggcc > 1:2686141/1‑101 (MQ=21)
aGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggccc < 2:3884051/101‑1 (MQ=255)
aGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggccc > 2:2985664/1‑101 (MQ=255)
aGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggccc > 1:107254/1‑101 (MQ=255)
ggACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggcccc > 2:543962/1‑101 (MQ=255)
ccGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCaa > 1:3827381/1‑101 (MQ=255)
ggg.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAgc < 1:5490881/101‑1 (MQ=255)
gg.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAgcg < 2:1042015/101‑1 (MQ=255)
gg.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAgcg < 2:372768/101‑1 (MQ=255)
g.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGGCGGCGGGGGGAAGCCGCGGCGAAATCCCGGCCCCGGCCAgcag > 1:1928515/1‑99 (MQ=21)
ccc.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGGAGCGGCCGGGAAATCCCGGCCCCGGCAAGCGccg > 1:3854437/1‑100 (MQ=21)
ccc.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGACGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCt < 1:5021100/101‑1 (MQ=255)
cc.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTg > 2:3853981/1‑101 (MQ=255)
tttATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGCAGCCGCGGCGCAATCCCCGCCCCGGCAAGCGCCTGGGc > 2:5725435/1‑101 (MQ=18)
tttATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGc > 1:172522/1‑101 (MQ=255)
ttATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGGCCCGGCAAGCGCCGGGGCg > 2:5705218/1‑101 (MQ=21)
ttATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCg > 1:2664536/1‑101 (MQ=255)
tATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCgg > 2:1364085/1‑101 (MQ=255)
tATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCgg > 1:830002/1‑101 (MQ=255)
tATCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGGCGCCGGGGCGGAGCCGCGGCGGAATCCCGGCCCCCGCCAGCGCCCGGGCgg > 2:1415897/1‑101 (MQ=18)
aTCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGGGCCCGGGCggg > 2:5243256/1‑101 (MQ=21)
aTCTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCggg > 1:5304161/1‑101 (MQ=255)
cTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGGGGGaa > 2:5183739/1‑101 (MQ=255)
cTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGag > 2:1193892/1‑100 (MQ=255)
cTTGCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGaa > 2:5980032/1‑101 (MQ=255)
gCCCAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGAt > 1:1290054/1‑101 (MQ=255)
cccAAAATACCCGGGGG.GTCGG.GGGG.CGG.ACCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATc < 1:282342/101‑1 (MQ=25)
ccAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGATATTCCTGGCCCGTCAACTGCCTGGGCGGGagggttg > 2:6959201/1‑95 (MQ=17)
ccAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcg < 2:2434854/101‑1 (MQ=255)
ccAAAATATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGAGcg > 1:915544/1‑101 (MQ=255)
aaaaTATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcgcg < 1:2793156/101‑1 (MQ=255)
aaTATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCCAGCGCCTGGGCGGGAAGATcgcgcg > 1:4651469/1‑101 (MQ=255)
aaTATCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcgcgcg > 2:2641197/1‑101 (MQ=255)
atCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGccc > 1:6147896/1‑101 (MQ=255)
atCCCGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGccc > 2:835163/1‑101 (MQ=255)
tCCCGGGG.GTCGG.GGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGcccc < 1:2520054/101‑1 (MQ=255)
ccccGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGcccc < 1:2884454/100‑1 (MQ=255)
cccGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCg > 2:5684095/1‑101 (MQ=255)
cccGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCg < 2:3187412/101‑1 (MQ=255)
cccGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCg > 2:6105552/1‑101 (MQ=255)
cGGGG.GTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCCGGGCGGGGAGATCGCGCGCCCCggg > 2:2752540/1‑100 (MQ=25)
cGGGG.GCC.CGGGGG.CGG.GCCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGa < 1:4837254/101‑1 (MQ=37)
ggg.gTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGc > 2:4363685/1‑101 (MQ=255)
ggg.gTC.CGGGGG.CGG.AGCCCCCGGCGGGGCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGc > 2:2589618/1‑101 (MQ=255)
gg.gTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCa > 2:4176070/1‑101 (MQ=255)
gg.gCC.C.GGGG.GGGCACCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCa < 1:5684385/101‑1 (MQ=38)
g.gTC.CGGGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCaa > 1:6720303/1‑101 (MQ=255)
|
CGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCC.TTTTATCTTGCCCAAAATATCCCGGGG.GTC.C.GGGG.CGG.AGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAA > NC_014034/2577183‑2577378
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|