New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1303934 =165 (0.490)141 (0.410) 32/190 20.3 0.40 intergenic (+121/+36) urtE/RCAP_rcc01231 urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
?NC_014034 2640144 = 266 (0.740)intergenic (‑120/+156) thrS/RCAP_rcc02462 threonyl‑tRNA synthetase/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 141 total aligned reads displayed.

TCGGCGCGCTTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGG..........................................  <  NC_014034/1304037‑1303934
...................................................................................................GGGGGCGCTGCCCCCCTCTT.GG.CTTCGGCCAATTCGCCCCCCGAG  >  NC_014034/2640144‑2640183
                                                                                                                                                  
    CGCGCTTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGC                                           <  1:342622/101‑1 (MQ=1)
    CGCGCTTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGC                                           >  1:7075804/1‑101 (MQ=1)
    CGCGCTTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGC                                           <  1:5774287/101‑1 (MQ=1)
    CGCGCTTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGC                                           >  1:242436/1‑101 (MQ=1)
     GCGCTTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCG                                          <  2:4035633/101‑1 (MQ=1)
     GCGCTTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCG                                          >  2:5297061/1‑101 (MQ=1)
      CGCTTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGC                                         >  1:4333757/1‑101 (MQ=1)
       ttTTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCT                                        <  2:5307395/99‑1 (MQ=1)
       GCTTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCT                                        <  1:5523431/101‑1 (MQ=1)
       GCTTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCT                                        >  2:5089088/1‑101 (MQ=1)
        CTTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTG                                       >  1:2603630/1‑101 (MQ=1)
        CTTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTG                                       <  1:3035622/101‑1 (MQ=1)
        CTTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTG                                       >  1:4273862/1‑101 (MQ=1)
        CTTTATGAGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTG                                       >  1:6860633/1‑101 (MQ=1)
         TTTATGCGTTCAAGCCGGTGCGCAAGACGCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGAGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGC                                      >  1:6278970/1‑101 (MQ=0)
         TTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGC                                      <  1:2566596/101‑1 (MQ=1)
         TTTATGCGTTCAAGCCGGTGCGCAAGACCCTGAGGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGC                                      >  1:5006791/1‑101 (MQ=1)
          TTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCC                                     >  1:2121524/1‑101 (MQ=1)
          TTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCC                                     <  1:355709/101‑1 (MQ=1)
          TTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCC                                     >  2:3606015/1‑101 (MQ=1)
           TATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCC                                    >  1:752220/1‑101 (MQ=1)
            tgGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCC                                   <  2:3496433/99‑1 (MQ=1)
            ATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCC                                   >  1:3931336/1‑101 (MQ=1)
            ATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCC                                   <  1:2973723/101‑1 (MQ=1)
             TGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGGGGCGCCCCC                                  >  2:3620631/1‑101 (MQ=0)
             TGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCC                                  <  2:3865728/101‑1 (MQ=1)
              GCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCC                                 <  2:6173518/101‑1 (MQ=1)
              GCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCC                                 <  2:49787/101‑1 (MQ=1)
              GCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCC                                 <  2:6675543/101‑1 (MQ=1)
               CGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGNCCCGCCCCGAAAAGGGGGCGGTGCCCCCCT                                >  1:2152337/1‑101 (MQ=1)
                GTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTC                               >  1:813598/1‑101 (MQ=1)
                GTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTC                               <  1:1674940/101‑1 (MQ=1)
                 tgaAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCT                              <  2:3149289/98‑1 (MQ=1)
                 TTCAAGCCGGTGCGCAAGACCCTGATGTGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCT                              <  1:6187771/101‑1 (MQ=1)
                 TTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCT                              <  1:5196607/101‑1 (MQ=1)
                 TTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCT                              >  1:5264226/1‑101 (MQ=1)
                  TCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCct                             >  1:3905166/1‑99 (MQ=31)
                  TCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT                             >  1:123969/1‑101 (MQ=1)
                   aAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.G                           <  2:6726010/100‑1 (MQ=1)
                   CAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTTCCCCCCTCTT.G                           <  1:5794036/101‑1 (MQ=1)
                   CAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.G                           <  2:637908/101‑1 (MQ=1)
                   CAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.G                           <  1:981732/101‑1 (MQ=1)
                    AAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG                          <  2:2805691/101‑1 (MQ=1)
                    AAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG                          <  2:5291839/101‑1 (MQ=1)
                    AAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG                          >  1:5478772/1‑101 (MQ=1)
                     AGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.C                        >  2:580755/1‑101 (MQ=1)
                      GCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Cc                       <  1:1865065/101‑2 (MQ=1)
                      GCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Cc                       <  2:4994327/101‑2 (MQ=1)
                      GCCGGTGCGCAAGACCCTGATGCGGGCGGGCTAGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Cc                       <  1:4858486/101‑2 (MQ=1)
                        cgatctGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Cctt                     <  1:6734674/95‑4 (MQ=2)
                        CGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTTCGG.CTT                      >  2:349236/1‑101 (MQ=0)
                        CGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Cctt                     <  2:242432/101‑4 (MQ=11)
                        CGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Cctt                     >  1:4679933/1‑98 (MQ=11)
                        CGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Cctt                     <  2:6604537/101‑4 (MQ=11)
                        CGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Cctt                     <  2:5125674/101‑4 (MQ=11)
                        CGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Cctt                     <  2:1186840/101‑4 (MQ=11)
                         GGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Ccttc                    >  2:2667033/1‑97 (MQ=31)
                         GGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Ccttc                    <  2:3029637/101‑5 (MQ=31)
                         GGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Ccttc                    >  2:3230936/1‑97 (MQ=31)
                         GGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Ccttc                    <  1:1113735/101‑5 (MQ=31)
                         GGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Ccttc                    <  1:3384132/101‑5 (MQ=31)
                         GGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Ccttc                    <  1:5551225/101‑5 (MQ=31)
                         GGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Ccttc                    >  2:1038864/1‑97 (MQ=31)
                         GGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Ccttc                    <  2:1589084/101‑5 (MQ=31)
                          GTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Ccttcg                   <  1:6014184/101‑6 (MQ=32)
                          GTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Ccttcg                   <  1:6599438/101‑6 (MQ=32)
                          GTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Ccttcg                   <  1:5089348/101‑6 (MQ=32)
                          GTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Ccttcg                   >  2:6329492/1‑96 (MQ=32)
                          GTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GG.Ccttcg                   <  2:4118445/101‑6 (MQ=32)
                             CGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCC                 <  1:5182200/101‑1 (MQ=32)
                             CGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCC                 <  1:4933070/101‑1 (MQ=32)
                              GCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCA                <  2:5902035/101‑1 (MQ=32)
                              GCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCA                <  1:2167725/101‑1 (MQ=32)
                              GCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCA                <  2:874301/101‑1 (MQ=32)
                               CAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAA               >  1:5931689/1‑101 (MQ=32)
                               CAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAA               <  1:407642/101‑1 (MQ=32)
                               CAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAA               <  1:3586660/101‑1 (MQ=32)
                                AAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAAT              >  2:202796/1‑101 (MQ=14)
                                 AGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCGATT             <  1:6829883/101‑1 (MQ=14)
                                 AGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATT             <  2:6860279/101‑1 (MQ=11)
                                 AGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATT             <  1:6526797/101‑1 (MQ=11)
                                 AGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATT             <  1:2568832/101‑1 (MQ=11)
                                  GACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCCATTC            >  1:971462/1‑101 (MQ=11)
                                  GACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTC            >  2:4128780/1‑101 (MQ=1)
                                  GACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTC            <  1:5332719/101‑1 (MQ=1)
                                   ACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTCa           <  2:5571310/101‑2 (MQ=11)
                                    CCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTCac          <  2:6919971/101‑3 (MQ=14)
                                     CCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTCACC         <  2:4354574/101‑1 (MQ=17)
                                     CCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTCACC         >  2:3673135/1‑101 (MQ=17)
                                     CCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTCACC         >  1:50346/1‑101 (MQ=17)
                                      CTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTCACCC        >  1:3316862/1‑101 (MQ=17)
                                       TGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTCACCCC       >  2:905845/1‑101 (MQ=17)
                                       TGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTCACCCC       >  2:1620104/1‑101 (MQ=17)
                                        GATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTCACCCCC      >  2:5999142/1‑101 (MQ=17)
                                        GATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTCACCCCC      >  1:2470757/1‑101 (MQ=17)
                                        GATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTCACCCCC      <  1:6777951/101‑1 (MQ=14)
                                        GATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTCACCCCC      <  1:1386215/101‑1 (MQ=14)
                                         ATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTCACCCCCC     >  1:4940306/1‑101 (MQ=14)
                                           GCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTCACCCCCCcg   >  2:2012808/1‑99 (MQ=9)
                                            CGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGGCGCTGCCCCCCTCTT.GGCCTTCGGCCAATTCACCCCCCGgg  <  1:4518987/101‑3 (MQ=0)
                                                                                                                                                  
TCGGCGCGCTTTATGCGTTCAAGCCGGTGCGCAAGACCCTGATGCGGGCGGGCTTGGGGATGCGCTGACAGGGTGCGGCCCTGCGGCCCGCCCCGAAAAGGGGG..........................................  <  NC_014034/1304037‑1303934
...................................................................................................GGGGGCGCTGCCCCCCTCTT.GG.CTTCGGCCAATTCGCCCCCCGAG  >  NC_014034/2640144‑2640183

Base quality scores:  ATCG  < 3 ≤  ATCG  < 21 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG