New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2070640 =72 (0.200)10 (0.030) 5/198 36.8 0.11 intergenic (+55/+117) dcd/guaB deoxycytidine triphosphate deaminase/inosine‑5'‑monophosphate dehydrogenase
?NC_014034 2330295 = 97 (0.270)intergenic (+270/+42) RCAP_rcc02161/mrcA hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

CACAAGGGCCGGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGC.................  <  NC_014034/2070739‑2070640
....................................................................................................GGCCCCCGGCGGGTCGC  >  NC_014034/2330295‑2330311
                                                                                                                     
CACAAGGGCCGGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCG                  >  1:1642407/1‑101 (MQ=1)
CACAAGGGCCGGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCG                  <  1:3204841/101‑1 (MQ=1)
         CGGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGC         >  2:3694466/1‑101 (MQ=11)
          GGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCG        >  1:6702782/1‑101 (MQ=1)
          GGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCG        >  2:2224589/1‑101 (MQ=1)
          GGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCG        >  2:7067751/1‑101 (MQ=1)
           GGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGG       >  2:5147700/1‑101 (MQ=11)
            GGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGGG      >  2:2597134/1‑101 (MQ=14)
               AAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGGGGCG   >  1:4762896/1‑101 (MQ=9)
               AAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCACCGCCCCCCGGCGGGggc   >  2:2720095/1‑98 (MQ=9)
               AAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCATGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGGGggg   >  1:6551177/1‑98 (MQ=9)
                AACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGGGGCGC  >  1:4348640/1‑101 (MQ=12)
                                                                                                                     
CACAAGGGCCGGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGC.................  <  NC_014034/2070739‑2070640
....................................................................................................GGCCCCCGGCGGGTCGC  >  NC_014034/2330295‑2330311

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG