New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2329682	365 (1.070)	26 (0.080)	3/190	38.1	0.07	coding (1002/1002 nt)	gap3	glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_014034	= 2341514	294 (0.820)					intergenic (‑65/+5)	purQ/purS	phosphoribosylformylglycinamidine synthase subunit PurQ/phosphoribosylformylglycinamidine synthase subunit PurS
Rejected: Position hash score below cutoff.

ACAACGAATGGGGCTTCTCGAACCGCATGTCGGATACCGCCGTGGCGATGGGCAAGCTGATCTGA...........................................  >  NC_014034/2329618‑2329682 ......................................................................GCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATTTGAG  <  NC_014034/2341514‑2341477                                                                  |||||                                       ACAATGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGT         <  2:5754497/101‑1 (MQ=0) ACAATGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGT         <  1:3671341/101‑1 (MQ=0)  CAATGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTA        <  2:3247583/101‑1 (MQ=0)  CAATGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTA        <  2:2190967/101‑1 (MQ=0)   aatGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTAT       <  2:6567513/98‑1 (MQ=0)   aatGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTAT       <  1:2854577/98‑1 (MQ=0)   aatGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTAT       <  2:6560990/98‑1 (MQ=0)   aatGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTAT       <  1:347372/98‑1 (MQ=0)   aatGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTAT       <  1:5338764/98‑1 (MQ=0)    atGAATGGGGCTTTTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATT      <  2:3845306/99‑1 (MQ=0)    atGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATT      <  2:3262299/99‑1 (MQ=0)    atGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATT      <  1:56755/99‑1 (MQ=0)    atGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATT      <  1:4408057/99‑1 (MQ=0)    atGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATT      <  1:2996811/99‑1 (MQ=0)    atGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATT      <  1:2329180/99‑1 (MQ=0)     tgagTGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATTT     <  2:1562505/97‑1 (MQ=0)     tGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATTT     <  2:1028713/100‑1 (MQ=0)     tGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATTT     <  1:6238746/100‑1 (MQ=0)     tGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATTT     >  2:3887813/2‑101 (MQ=0)     tGAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATTT     >  2:5091894/2‑101 (MQ=0)      GAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATTTc    <  2:1809007/101‑2 (MQ=0)      GAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATTTc    <  2:2544576/101‑2 (MQ=0)      GAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATTTc    >  1:5972969/1‑100 (MQ=0)      GAATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATTTc    <  1:3595386/101‑2 (MQ=0)       AATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATTTcg   >  1:6785256/1‑99 (MQ=0)        ATGGGGCTTCTCGAACCGCATGGCCGATACCGCCGTGGCGATGGGCAAGCTGATCTGAGAAAAGCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATTTcgc  >  2:4337251/1‑98 (MQ=0)                                                                  |||||                                       ACAACGAATGGGGCTTCTCGAACCGCATGTCGGATACCGCCGTGGCGATGGGCAAGCTGATCTGA...........................................  >  NC_014034/2329618‑2329682 ......................................................................GCCGGGGGCGCTGCCCCCGGACCCCCGGCGTATTTGAG  <  NC_014034/2341514‑2341477 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG