New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	744645 =	173 (0.510)	28 (0.080)	17/190	27.4	0.19	intergenic (+30/+182)	idi2/bchO	isopentenyl‑diphosphate delta‑isomerase/magnesium‑chelatase BchO
	?	NC_014034	= 1699955	61 (0.170)					intergenic (+28/+15)	RCAP_rcc01568/purF	RES domain family protein/amidophosphoribosyltransferase
Rejected: Position hash score below cutoff.

AAGCAGGGGTGGGACAGGCTGTACCGCCGCAGACGGAAAGTCATTCATTTCATCTTGCCCCAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGTCGCC....................................................................................................  <  NC_014034/744748‑744645 ...................................................................................................TCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCAGCGAAACAG  <  NC_014034/1699955‑1699856                                                                                                                                                                                                                                                                                   gGGGGGTCGGGGGGCGGAGCCCCCGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTT                                    <  2:2134715/100‑1 (MQ=1)                                                                           gtgCGGGGGGGGACCCCCCGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCC                               <  2:693435/98‑1 (MQ=0)                                                                             cgGGGGCCGGCGCCCCGGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGA                             <  2:5518683/99‑1 (MQ=0)                                                                              tctGGGCGGAGCCCCCGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAG                            <  1:361852/98‑1 (MQ=1)                                                                                GGGGCGGACCCCCCGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGAT                          <  1:2037660/101‑1 (MQ=1)                                                                                  ggggcccCCCCGGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCG                        <  2:2402342/94‑1 (MQ=0)                                                                                  GGCGGATCCCCCGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCG                        <  2:1568810/101‑1 (MQ=1)                                                                                    atctGCCCCCGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGAAGGCCGGTCAGTTGCGCCGAGATCGGC                      <  1:5512624/97‑1 (MQ=0)                                                                                          CCCGGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCC                <  2:4654459/101‑1 (MQ=1)                                                                                             gGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTC             <  1:1307210/100‑1 (MQ=1)                                                                                              GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCGGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCC            <  1:3234962/101‑1 (MQ=1)                                                                                              GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCC            <  1:6320687/101‑1 (MQ=1)                                                                                              GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCC            <  2:1367872/101‑1 (MQ=1)                                                                                              GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCC            <  2:6166439/101‑1 (MQ=1)                                                                                              GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCC            <  2:4091833/101‑1 (MQ=1)                                                                                               GCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCA           <  1:2691903/101‑1 (MQ=1)                                                                                               GCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATAGGCGGCTCCCTCCA           <  1:1600178/101‑1 (MQ=1)                                                                                                CGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCcg          >  1:1397095/1‑99 (MQ=1)                                                                                                CGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCAc          >  1:2263580/1‑100 (MQ=1)                                                                                                CGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCAG          <  1:1642796/101‑1 (MQ=1)                                                                                                 GGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGGTCCCTCCAcc         >  1:2305954/1‑99 (MQ=1)                                                                                                 GGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCCGC         >  1:6221641/1‑101 (MQ=1)                                                                                                 GGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCAGC         <  2:6729717/101‑1 (MQ=1)                                                                                                 GGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCGCCCCCCcgg         >  2:2285258/1‑98 (MQ=0)                                                                                                  GGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGGTCCCCCCAGgg        >  2:3001419/1‑99 (MQ=0)                                                                                                  GGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCAGCG        <  1:1533291/101‑1 (MQ=1)                                                                                                  GGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCAGCG        <  2:677651/101‑1 (MQ=1)                                                                                                  GGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCAGCG        >  1:2877050/1‑101 (MQ=1)                                                                                                                                                                                                              AAGCAGGGGTGGGACAGGCTGTACCGCCGCAGACGGAAAGTCATTCATTTCATCTTGCCCCAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGTCGCC....................................................................................................  <  NC_014034/744748‑744645 ...................................................................................................TCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCAGCGAAACAG  <  NC_014034/1699955‑1699856 Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG