New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 74479344 (0.130)23 (0.070) 2/196 39.8 0.25 intergenic (+178/+34) idi2/bchO isopentenyl‑diphosphate delta‑isomerase/magnesium‑chelatase BchO
?NC_014034 900805 = 92 (0.260)intergenic (‑134/‑153) ldh/ftsW L‑lactate dehydrogenase/cell division protein FtsW
Rejected: Position hash score below cutoff.

CAAGATGAAATGAATGACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCC....................................................................................................  >  NC_014034/744692‑744793
....................................................................................................CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCGCCAA  >  NC_014034/900805‑900904
                                                                                                                                                                                                          
                                                                                    gcGGGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGC                 >  2:1220318/3‑101 (MQ=31)
                                                                                     cGGGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCT                >  2:3029809/2‑101 (MQ=11)
                                                                                     cGGGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCT                <  2:1995112/100‑1 (MQ=11)
                                                                                     GGGGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCT                <  1:859662/101‑1 (MQ=11)
                                                                                     GGGGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCT                <  1:1302929/101‑1 (MQ=11)
                                                                                      GGGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCCAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTA               >  2:3415189/1‑101 (MQ=1)
                                                                                      GGGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTA               >  2:3856555/1‑101 (MQ=1)
                                                                                      GGGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTA               >  1:3831681/1‑101 (MQ=1)
                                                                                      GGGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCCGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTA               >  1:90097/1‑101 (MQ=1)
                                                                                       GGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAG              >  2:54777/1‑101 (MQ=1)
                                                                                       GGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAG              <  2:6910057/101‑1 (MQ=1)
                                                                                           ggcggcgCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCTGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAG            <  2:5663471/94‑1 (MQ=0)
                                                                                           ggcggagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAG            <  1:796653/94‑1 (MQ=1)
                                                                                           ggcggagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAG            >  2:3909579/8‑101 (MQ=1)
                                                                                             cggagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTC          >  2:3449218/6‑101 (MQ=1)
                                                                                             cggagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTC          >  2:6277035/6‑101 (MQ=1)
                                                                                              ggagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCG         >  1:2795172/5‑101 (MQ=1)
                                                                                              ggagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCG         >  1:2244913/5‑101 (MQ=1)
                                                                                               gagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGG        >  1:4455281/4‑101 (MQ=1)
                                                                                                 gCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCG      >  1:674417/2‑101 (MQ=1)
                                                                                                   CCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCGCC    <  1:1479191/101‑1 (MQ=1)
                                                                                                   CCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCGCC    >  2:4570078/1‑101 (MQ=1)
                                                                                                   CCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCGCC    <  2:4850733/101‑1 (MQ=1)
                                                                                                                                                                                                          
CAAGATGAAATGAATGACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCC....................................................................................................  >  NC_014034/744692‑744793
....................................................................................................CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCGCCAA  >  NC_014034/900805‑900904

Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG