| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | = 974198 | 13 (0.040) | 5 (0.010) | 5/196 | 36.6 | 0.04 | intergenic (+78/+181) | RCAP_rcc00884/RCAP_rcc00885 | hypothetical protein/hypothetical protein |
| ? | NC_014034 | 2665718 = | 262 (0.730) | intergenic (‑131/+106) | RCAP_rcc02481/RCAP_rcc02482 | hypothetical protein/HIT family protein | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
GGATGTTGCCGCGCAACTCTGAACGCCGCCGGATGGCATTCAAAAGGCGCCCCCCGGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACCCGCCG.................................................................................................... > NC_014034/974099‑974198
..................................................................................................CGGGGGGCTTCGCCCCCCGGGCCCCCCAGCGTATTTGGGCCAAGAAAAAGCCGATGCCGTTTCTTCTTGGCCCAAATACGCCCTTTCGCGGGCGGGACCGGG > NC_014034/2665718‑2665817
GGATGTTGCCGCGCAACTCTGAACGCCGCCGGATGGCATTCAAAAGGCGCCCCCCGGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACCCGCCGG > 1:2509724/1‑101 (MQ=255)
ATGTTGCCGCGCAACTCTGAACGCCGCCGGATGGCATTCAAAAGGCGCCCCCCGGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACCCGCCCGGG > 2:3414690/1‑101 (MQ=255)
TGCCGCGCAACTCTGAACGCCGCCGGATGGCATTCAAAAGGCGCCCCCCGGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACCCGCCGGGGGGgg > 1:2778881/1‑99 (MQ=255)
GCGCAACTCTGAACGCCGCCGGATGGCATTCAAAAGGCGCCCCCCGGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACCCGCCGGCGGGCgctgc > 2:5816602/1‑96 (MQ=255)
GATGGCATTCAAAAGGCGCCCCCCGGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACCCGCCGGGGGGCTTCGCCCCCCGGACCCCCCAGCGTAT > 1:4097393/1‑101 (MQ=255)
GGATGTTGCCGCGCAACTCTGAACGCCGCCGGATGGCATTCAAAAGGCGCCCCCCGGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACCCGCCG.................................................................................................... > NC_014034/974099‑974198
..................................................................................................CGGGGGGCTTCGCCCCCCGGGCCCCCCAGCGTATTTGGGCCAAGAAAAAGCCGATGCCGTTTCTTCTTGGCCCAAATACGCCCTTTCGCGGGCGGGACCGGG > NC_014034/2665718‑2665817
Base quality scores:
ATCG
< 3 ≤
ATCG
< 31 ≤
ATCG
< 33 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
|