New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 974307	14 (0.050)	17 (0.060)	6/170	33.1	0.21	intergenic (+187/+72)	RCAP_rcc00884/RCAP_rcc00885	hypothetical protein/hypothetical protein
	?	NC_014034	= 3329507	112 (0.310)					intergenic (‑42/+27)	argF/argD	ornithine carbamoyltransferase/acetylornithine aminotransferase
Rejected: Position hash score below cutoff.

TCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGG....................................................................................................  >  NC_014034/974199‑974307 ...............................................................................................ACAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCCGCTCGGCAAGGAAACCGACATGACCCATTTTCTTGACATCCACACCACCAGCCCGGCCGATCTGCGCTCGATGATCG  <  NC_014034/3329507‑3329408                                                                                                                                                                                                                               ACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTTCGACAAATATCCCGGGGGg                                                                                                    >  2:1405557/1‑100 (MQ=0)            ACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATTCCGGGGGg                                                                                                    >  2:2046590/1‑100 (MQ=0)            ACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGg                                                                                                    >  2:5998656/1‑100 (MQ=0)              CCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGgcn                                                                                                  >  1:3910510/1‑98 (MQ=0)              CCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCC                                                                                                  >  1:3648991/1‑101 (MQ=0)              CCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCC                                                                                                  <  2:1084199/101‑1 (MQ=0)               CCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCG                                                                                                 <  1:758928/101‑1 (MQ=0)                  CAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGG                                                                                              <  1:3862487/101‑1 (MQ=0)                  CAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGG                                                                                              <  2:4097199/101‑1 (MQ=0)                   AGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGG                                                                                             <  2:6075685/101‑1 (MQ=0)                     CGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCg                                                                                           >  2:3495353/1‑100 (MQ=0)                       TATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCggg                                                                                         >  1:1961341/1‑98 (MQ=0)                          TTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCC                                                                                      >  1:4683064/1‑101 (MQ=0)                           TGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCC                                                                                     >  2:3698667/1‑101 (MQ=0)                            GCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCC                                                                                    >  1:3894695/1‑101 (MQ=0)                             CACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCC                                                                                   <  1:6199692/101‑1 (MQ=0)                             CACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCC                                                                                   <  2:3247618/101‑1 (MQ=0)                                                                                                                                                                                                                    TCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGG....................................................................................................  >  NC_014034/974199‑974307 ...............................................................................................ACAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCCGCTCGGCAAGGAAACCGACATGACCCATTTTCTTGACATCCACACCACCAGCCCGGCCGATCTGCGCTCGATGATCG  <  NC_014034/3329507‑3329408 Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 27 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG