New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1396433 =265 (1.070)145 (0.590) 7/138 28.5 0.41 coding (315/1578 nt) RCAP_rcc01307 hypothetical protein
?NC_014034 = 1397797 157 (0.440)intergenic (+101/+1797) RCAP_rcc01307/RCAP_rcc01309 hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 379 total aligned reads displayed.

CAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCGTGGATC  >  NC_014034/1396333‑1396533
                                                                                                    |                                                                                                    
 aaGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCAcg                                                                                                     >  1:994886/1‑101 (MQ=255)
 aaGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCAcg                                                                                                     >  1:6651503/1‑101 (MQ=255)
 aaGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCAcg                                                                                                     >  2:5316445/1‑101 (MQ=255)
  aGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCAcgg                                                                                                    >  2:4478613/1‑101 (MQ=255)
      gTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGt                                                                                                <  2:1202651/101‑1 (MQ=255)
       tGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTc                                                                                               <  1:4462655/101‑1 (MQ=255)
        ggggTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGGGATGGCGACGGGCACCACGGCGGTCg                                                                                              >  1:6953378/1‑101 (MQ=255)
          ggTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACAACGGCGGTCGcc                                                                                            >  1:4395175/1‑100 (MQ=255)
           gTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTc                                                                                           <  1:4267223/101‑1 (MQ=255)
           gTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTc                                                                                           >  1:3345421/1‑101 (MQ=255)
            tGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTcc                                                                                          >  2:7112011/1‑101 (MQ=255)
               gTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGGGACGGGCACCACGGCGGTGGCTccccc                                                                                       >  2:5813865/1‑101 (MQ=255)
               gTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTccccc                                                                                       >  2:5937040/1‑101 (MQ=255)
                tGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTcccccc                                                                                      >  2:2978820/1‑101 (MQ=255)
                 gggCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCcg                                                                                     <  1:2967284/101‑1 (MQ=255)
                 gggCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCcg                                                                                     >  1:3248443/1‑101 (MQ=255)
                 gggCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCcg                                                                                     <  2:6721034/101‑1 (MQ=255)
                 gggCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCcg                                                                                     >  1:142477/1‑101 (MQ=255)
                  ggCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCcgc                                                                                    >  1:816540/1‑101 (MQ=255)
                     tGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCggg                                                                                 >  1:2763209/1‑101 (MQ=255)
                         cAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCggggggg                                                                             >  2:516715/1‑99 (MQ=255)
                           gACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTg                                                                           >  1:2333165/1‑101 (MQ=255)
                            aCAATCGCTGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTgg                                                                          <  2:1135575/101‑1 (MQ=255)
                            aCAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTgg                                                                          >  1:3115619/1‑101 (MQ=255)
                              agaCGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                        <  1:7017329/99‑1 (MQ=255)
                              aaaCGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                        >  2:2155467/1‑101 (MQ=255)
                               aaCGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                       <  2:142474/101‑1 (MQ=255)
                               aaCGCTGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                       <  1:3770456/101‑1 (MQ=255)
                                  gCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                    >  2:4589705/1‑101 (MQ=255)
                                  gCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                    >  2:4962687/1‑101 (MQ=255)
                                    tctCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                  <  2:4391171/99‑1 (MQ=255)
                                     gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTATGAGGGCTGGCGGCCCGGTCGTGGATCCCGCCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca                                                                 <  1:6313317/101‑2 (MQ=2)
                                     gTCGCACCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACg                                                                 <  1:1983086/101‑1 (MQ=255)
                                       cGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGa                                                               <  2:5492436/101‑1 (MQ=255)
                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGAc                                                              <  1:1788595/101‑1 (MQ=255)
                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGAc                                                              >  2:2745069/1‑101 (MQ=255)
                                          tCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCt                                                            <  2:825464/101‑1 (MQ=255)
                                           ccccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTg                                                           <  2:318253/101‑1 (MQ=255)
                                           ccccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTg                                                           >  1:5846267/1‑101 (MQ=255)
                                           ccccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTg                                                           >  2:1264196/1‑101 (MQ=255)
                                           ccccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTg                                                           <  1:3646327/101‑1 (MQ=255)
                                            cccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGa                                                          >  2:3689735/1‑101 (MQ=255)
                                             ccccGCGGGGGCGTGGATCGAAACCTAGGAGGGCTGGCGTCCCGGTCGTGGATCCCGCCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatcagcttg                                                         <  2:4002638/101‑10 (MQ=2)
                                              cccGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGaaa                                                        <  1:2694672/101‑1 (MQ=255)
                                               cctcgGGGACGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAAt                                                       <  2:7050666/98‑1 (MQ=255)
                                                cgcgGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAAtt                                                      >  2:4190850/1‑101 (MQ=255)
                                                 gcgGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCGCGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTc                                                     <  1:5434705/101‑1 (MQ=255)
                                                 gcgGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTc                                                     <  2:1765603/101‑1 (MQ=255)
                                                 gcgGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTc                                                     <  1:1568765/101‑1 (MQ=255)
                                                  cgGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTcc                                                    <  2:6831681/101‑1 (MQ=255)
                                                  cgGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTcc                                                    >  2:2405593/1‑101 (MQ=255)
                                                   gggggCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCcg                                                   >  1:6181699/1‑101 (MQ=255)
                                                   gggggCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCcg                                                   >  2:1939346/1‑101 (MQ=255)
                                                      ggCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCgg                                                >  2:2574225/1‑101 (MQ=255)
                                                        cGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGa                                              <  2:4326872/101‑1 (MQ=255)
                                                         gTGGATCGAAACCGCGCCCTGCGGGCGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGAGGGaa                                             >  2:5096311/1‑101 (MQ=255)
                                                          tGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGaaa                                            >  2:2031588/1‑101 (MQ=255)
                                                          tGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGaaa                                            <  2:1619986/101‑1 (MQ=255)
                                                          tGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGaaa                                            <  1:4980706/101‑1 (MQ=255)
                                                          gggATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGaaa                                            <  2:875002/100‑1 (MQ=255)
                                                          gggATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGaaa                                            <  1:6491871/100‑1 (MQ=255)
                                                           ggATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCCGGaaaa                                           >  1:1219255/1‑100 (MQ=255)
                                                             aTCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAAcgc                                         <  2:1813616/101‑1 (MQ=255)
                                                             aTCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAAcgc                                         <  1:2118241/101‑1 (MQ=255)
                                                             aTCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAAcgc                                         >  2:558018/1‑101 (MQ=255)
                                                             aTCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAAcgc                                         >  2:6290385/1‑101 (MQ=255)
                                                               agAACCCGCGCGCTGGCGGTGCTCGCGCCGGGCAACACGGCGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcgg                                       <  2:2095793/100‑1 (MQ=25)
                                                                gAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcggc                                      >  1:2475056/1‑101 (MQ=255)
                                                                gAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcggc                                      >  1:3962823/1‑101 (MQ=255)
                                                                 aaaCCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcggcg                                     >  1:2413995/1‑101 (MQ=255)
                                                                 aaaCCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcggcg                                     <  1:5298104/101‑1 (MQ=255)
                                                                 aaaCCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcggcg                                     <  1:5927392/101‑1 (MQ=255)
                                                                   aCCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcggcggc                                   <  2:32815/101‑1 (MQ=255)
                                                                   aCCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcggcggc                                   <  1:2180135/101‑1 (MQ=255)
                                                                    ccGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATCCCGCGGGAAACgcggcggcg                                  >  1:5626570/1‑101 (MQ=255)
                                                                    cagcggCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcggcggcg                                  >  2:6545919/3‑101 (MQ=255)
                                                                     cgcgCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGa                                 <  2:4050236/101‑1 (MQ=255)
                                                                      gcgcCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAg                                <  2:6465828/101‑1 (MQ=255)
                                                                      gcgcCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAg                                <  1:517474/101‑1 (MQ=255)
                                                                      gcgcCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAg                                >  1:4653658/1‑101 (MQ=255)
                                                                         cccTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCAc                             <  2:3809910/101‑1 (MQ=255)
                                                                           cTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGt                           <  1:5961112/101‑1 (MQ=255)
                                                                            tGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTc                          <  2:2763107/101‑1 (MQ=255)
                                                                                 gTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTcc                     >  1:1011716/1‑101 (MQ=255)
                                                                                  tGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGGGCACGTCGCTccc                    >  2:2265279/1‑101 (MQ=255)
                                                                                  tGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTccc                    >  2:183454/1‑101 (MQ=255)
                                                                                     tGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTcccccc                 <  1:2539284/101‑1 (MQ=255)
                                                                                     tGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTcccccc                 <  1:1678594/101‑1 (MQ=255)
                                                                                      ggCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCcg                <  2:3581390/101‑1 (MQ=255)
                                                                                         gACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCgg             >  1:1260911/1‑101 (MQ=255)
                                                                                          aCGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCggg            >  2:1481650/1‑101 (MQ=255)
                                                                                            gggCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCggggg          >  2:6159669/1‑101 (MQ=255)
                                                                                            gggCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCggggg          >  1:6807381/1‑101 (MQ=255)
                                                                                             ggCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGc         >  1:4699556/1‑101 (MQ=255)
                                                                                             ggCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGc         <  1:1611800/101‑1 (MQ=255)
                                                                                               caccacGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCGt       <  1:415112/101‑1 (MQ=255)
                                                                                               caccacGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCGt       <  1:862445/101‑1 (MQ=255)
                                                                                                accacGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCGTg      <  1:5087094/101‑1 (MQ=255)
                                                                                                  cacGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCGTGGa    >  1:553502/1‑101 (MQ=255)
                                                                                                  cacGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCGTGGa    <  2:6619965/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
CAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCGTGGATC  >  NC_014034/1396333‑1396533

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG