BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1396638 =	238 (1.020)	138 (0.590)	48/130	8.1	0.41	coding (520/1578 nt)	RCAP_rcc01307	hypothetical protein
*	?	NC_014034	= 1397797	157 (0.440)	138 (0.590)	48/130	8.1	0.41	intergenic (+101/+1797)	RCAP_rcc01307/RCAP_rcc01309	hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 346 total aligned reads displayed.


CTGCTTTCGTGGGACTGGCCAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACC  >  NC_014034/1396538‑1396738


cTGCTTTCGTGGGACTGGCCAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCgg                                                                                                       <  1:3509628/101‑1 (MQ=255)


  gCTTTCGTGGGACTGGCCAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGt                                                                                                     <  1:3392333/101‑1 (MQ=255)


   cTTTCGTGGGACTGGCCAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTc                                                                                                    >  2:5097640/1‑101 (MQ=255)


     ttCGTGGGACTGGCCAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGc                                                                                                  >  2:3189097/1‑101 (MQ=255)


        gTGGGACTGGCCAGCCGCCCGCGCCAAGTCTCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTcc                                                                                               <  1:1958376/101‑1 (MQ=255)


        gTGGGACTGGCCAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTcc                                                                                               >  1:1777606/1‑101 (MQ=255)


        gTGGGACTGGCCAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTcc                                                                                               <  2:3428298/101‑1 (MQ=255)


         tGGGACTGGCCAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTccc                                                                                              >  2:5633317/1‑101 (MQ=255)


          gggACTGGCCAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTcccc                                                                                             >  1:3041476/1‑101 (MQ=255)


          gggACTGGCCAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTcccc                                                                                             <  1:4180141/101‑1 (MQ=255)


          gggACTGGCCAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTcccc                                                                                             <  2:592373/101‑1 (MQ=255)


                 gCCAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCggg                                                                                      <  1:498866/101‑1 (MQ=255)


                 gCCAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCggg                                                                                      >  1:2743992/1‑101 (MQ=255)


                  ccAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCgggg                                                                                     <  2:5295463/101‑1 (MQ=255)


                  ccAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCgggg                                                                                     >  2:2920945/1‑101 (MQ=255)


                    cgccgccCGCGCCAAGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGTGGc                                                                                   <  1:6829323/100‑1 (MQ=255)


                    aGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGAGGCCTATCTGATTTCGGGTGCGTCCCCCCGCgggggg                                                                                   >  2:6936777/1‑100 (MQ=37)


                    aGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGc                                                                                   >  2:1009236/1‑101 (MQ=255)


                     gccgccCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCg                                                                                  >  2:102286/1‑101 (MQ=255)


                      ccgcccgcGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGTTCGCTCCCCCCGCGGGGGCGt                                                                                 <  2:6577623/101‑1 (MQ=255)


                        gcccgcGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTgg                                                                               <  1:3262993/101‑1 (MQ=255)


                        gcccgcGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTgg                                                                               >  2:3637098/1‑101 (MQ=255)


                           cgcgCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.Tc                                                                           <  2:577993/101‑1 (MQ=255)


                           cgcgCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.Tc                                                                           <  2:6020588/101‑1 (MQ=255)


                               ccAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGaaa                                                                       <  2:2413901/101‑1 (MQ=255)


                                 aaGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAAcc                                                                     <  1:706758/101‑1 (MQ=255)


                                 aaGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAAcc                                                                     >  1:6411114/1‑101 (MQ=255)


                                   gccGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCAt                                                                   <  2:1859760/99‑1 (MQ=255)


                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCAt                                                                   <  1:4417729/101‑1 (MQ=255)


                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCAt                                                                   <  1:2405687/101‑1 (MQ=255)


                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCAt                                                                   <  1:1009271/101‑1 (MQ=255)


                                    tCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATg                                                                  <  1:4703869/101‑1 (MQ=255)


                                    tCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATg                                                                  >  2:6771952/1‑101 (MQ=255)


                                    gcGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAActcgc                                                                  <  2:5339149/100‑5 (MQ=255)


                                     cGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATgc                                                                 >  2:6703105/1‑101 (MQ=255)


                                     cGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATgc                                                                 >  1:6499224/1‑101 (MQ=255)


                                        tCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATgcggc                                                              >  2:5559157/1‑101 (MQ=255)


                                        gccccccGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATgcggc                                                              <  1:899179/100‑1 (MQ=255)


                                         ccccccGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATgcggcg                                                             >  1:6718322/1‑101 (MQ=255)


                                           ccccGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGAt                                                           <  1:747167/101‑1 (MQ=255)


                                            cccGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATTTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATa                                                          <  1:3125532/101‑1 (MQ=255)


                                            cccGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATa                                                          <  2:3259499/101‑1 (MQ=255)


                                            cccGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATa                                                          <  1:3606702/101‑1 (MQ=255)


                                             ccGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATaa                                                         <  1:1557136/101‑1 (MQ=255)


                                              cgcgGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAAc                                                        <  2:198969/101‑1 (MQ=255)


                                              cgcgGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAAc                                                        <  1:5273865/101‑1 (MQ=255)


                                               gcgGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACt                                                       <  2:1644745/101‑1 (MQ=255)


                                               gcgGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACt                                                       <  1:5387594/101‑1 (MQ=255)


                                                cgGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTc                                                      >  2:1110282/1‑101 (MQ=255)


                                                  ggggCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGc                                                    >  1:1396468/1‑101 (MQ=255)


                                                   gggCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGct                                                   >  1:4923524/1‑101 (MQ=255)


                                                    ggCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGctc                                                  >  1:4050322/1‑101 (MQ=255)


                                                     gCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGctct                                                 <  1:370809/101‑1 (MQ=255)


                                                      cGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCtt                                                <  2:4379024/101‑1 (MQ=255)


                                                      cGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCtt                                                <  1:2692150/101‑1 (MQ=255)


                                                       gTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCttc                                               >  1:2264573/1‑100 (MQ=255)


                                                       gTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTg                                               >  2:127616/1‑101 (MQ=255)


                                                       gTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGAGAACTCGCTCTTg                                               <  1:5126851/101‑1 (MQ=255)


                                                         ggATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCg                                             >  2:6178973/1‑101 (MQ=255)


                                                         ggATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCg                                             >  2:872846/1‑101 (MQ=255)


                                                           aTCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGAt                                           <  2:2174930/101‑1 (MQ=255)


                                                            tCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATc                                          >  1:2469046/1‑101 (MQ=255)


                                                            tCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATc                                          >  2:3964021/1‑101 (MQ=255)


                                                            tCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATc                                          <  2:3115506/101‑1 (MQ=255)


                                                             cGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATcc                                         >  2:1398263/1‑101 (MQ=255)


                                                             cGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATcc                                         <  2:3561203/101‑1 (MQ=255)


                                                              gAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCg                                        <  1:4523590/101‑1 (MQ=255)


                                                              gAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACCCGCTCTTGCGATCCg                                        <  1:5633607/101‑1 (MQ=255)


                                                                aaCGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTc                                      >  1:2951958/1‑101 (MQ=255)


                                                                aaCGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTc                                      >  1:1116368/1‑101 (MQ=255)


                                                                aaCGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTc                                      <  1:6217005/101‑1 (MQ=255)


                                                                  cGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCAt                                    >  1:533258/1‑101 (MQ=255)


                                                                  cGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCAt                                    <  1:4823318/101‑1 (MQ=255)


                                                                   gATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCAtc                                   >  1:655345/1‑101 (MQ=255)


                                                                    aTTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCAtcg                                  >  2:4167444/1‑101 (MQ=255)


                                                                     tttCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCAtcgt                                 <  2:6629764/101‑1 (MQ=255)


                                                                      ttCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCAtcgtc                                >  2:4758129/1‑101 (MQ=255)


                                                                      ttCGTCGCTTACGACGCCTAGCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCAtcgtc                                <  2:6987415/101‑1 (MQ=255)


                                                                       tcgtcgCTTACGACGCCTATCTGATTTCGGGTCGCTCGCCCCGCGGGGGCGTGGA.TCGAAACAATGCGGCGATAACTCGCTCTTGCGATCCGTCAtcgtcg                               >  1:6317563/1‑101 (MQ=255)


                                                                         gtcgCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCt                             >  2:3020785/1‑101 (MQ=255)


                                                                            gCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTccc                          >  2:4506470/1‑101 (MQ=255)


                                                                               tACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTcccccc                       <  1:5824979/101‑1 (MQ=255)


                                                                               tACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTcccccc                       >  1:2793066/1‑101 (MQ=255)


                                                                               tACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTcccccc                       <  1:5471647/101‑1 (MQ=255)


                                                                                acgacgCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCcg                      >  1:5533631/1‑101 (MQ=255)


                                                                                acgacgCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCcg                      <  2:495612/101‑1 (MQ=255)


                                                                                   acgCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TAGAAACCATGCGGCGATAACTCGCTCTTGCGATGCGTCATCGTCGCTCCCCCCGCgg                   >  2:832503/1‑101 (MQ=255)


                                                                                    cgCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCggg                  <  2:2773947/101‑1 (MQ=255)


                                                                                     gCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCgggg                 >  1:6175850/1‑101 (MQ=255)


                                                                                      ccTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCggggg                >  1:4277536/1‑101 (MQ=255)


                                                                                       cTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGc               >  1:6058018/1‑101 (MQ=255)


                                                                                       cTATCTAATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGc               <  2:4117194/101‑1 (MQ=255)


                                                                                        tATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCg              >  2:3806956/1‑101 (MQ=255)


                                                                                           cTGATTTCGGGTCGCTCCCCCCGCGGGGGGGGGGATTGGAAACCAT.CGGCGGAAACTCCCTCCTGCGGTCCGGCATCGTCCGTCCCCCCCCCGGGGCGGgg           >  2:2653511/1‑101 (MQ=255)


                                                                                            tGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGa          >  2:643788/1‑101 (MQ=255)


                                                                                            tGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGa          <  2:461413/101‑1 (MQ=255)


                                                                                            tGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAAATCGCTCTTGCGATCCGGCGTAGGCGATCCCCCCGCggggggggggg          >  2:3283332/1‑95 (MQ=25)


                                                                                              aTTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATc        <  1:2155547/101‑1 (MQ=255)


                                                                                               tttCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCg       <  2:4923272/101‑1 (MQ=255)


                                                                                                ttCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGa      >  1:1885609/1‑101 (MQ=255)


CTGCTTTCGTGGGACTGGCCAGCCGCCCGCGCCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGA.TCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACC  >  NC_014034/1396538‑1396738

Base quality scores:


ATCG

< 3 ≤


ATCG

< 23 ≤


ATCG

< 31 ≤


ATCG

< 35 ≤


ATCG

< 41 ≤


ATCG