BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1253890	62 (0.180)	47 (0.140)	8/192	33.6	0.34	intergenic (+48/+43)	RCAP_rcc01181/hisH	hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
*	?	NC_014034	= 1721531	120 (0.340)	47 (0.140)	8/192	33.6	0.34	intergenic (‑426/+20)	RCAP_rcc01588/RCAP_rcc01589	GSCFA family protein/ErfK/YbiS/YcfS/YnhG family protein
Rejected: Position hash score below cutoff.

Only 100 of 114 total aligned reads displayed.


TGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGAG.........CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAAT  >  NC_014034/1253790‑1253955


tGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCg                                                                                 >  2:1720965/1‑101 (MQ=255)


tGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCg                                                                                 <  1:1621447/101‑1 (MQ=255)


tGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCg                                                                                 <  2:1879253/101‑1 (MQ=255)


tGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCg                                                                                 <  2:1937031/101‑1 (MQ=255)


tGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCg                                                                                 <  2:5648494/101‑1 (MQ=255)


tGGGGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCGCTAAATACCT.....CGGGGGTGCg                                                                                 >  1:6845983/1‑101 (MQ=255)


 ggTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCg.....g                                                                           <  1:877375/101‑1 (MQ=255)


 ggTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCg.....g                                                                           <  2:1358955/101‑1 (MQ=255)


 ggTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCg.....g                                                                           >  2:3181262/1‑101 (MQ=255)


  gTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCg.....gg                                                                          <  2:6587462/101‑1 (MQ=255)


   tGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCg.....ggg                                                                         <  2:2009577/101‑2 (MQ=255)


   tGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCg.....ggg                                                                         >  1:4191827/1‑100 (MQ=255)


   tGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCg.....ggg                                                                         <  2:2675964/101‑2 (MQ=255)


    gCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCg.....gggg                                                                        >  2:380820/1‑99 (MQ=255)


    gCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCg.....gggg                                                                        >  1:2240352/1‑99 (MQ=255)


    gCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCg.....gggg                                                                        <  2:6904712/101‑3 (MQ=255)


     cTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCTCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........c                                                              <  2:4863584/101‑1 (MQ=255)


     cTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........c                                                              <  2:6583230/101‑1 (MQ=255)


     cTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........c                                                              >  1:4286900/1‑101 (MQ=255)


      tGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cg                                                             >  2:5118987/1‑101 (MQ=255)


      tGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cg                                                             <  2:6586279/101‑1 (MQ=255)


      tGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cg                                                             >  2:6798983/1‑101 (MQ=255)


       gggCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cgg                                                            >  2:5088940/1‑100 (MQ=255)


       gggCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cgg                                                            >  1:159875/1‑100 (MQ=255)


        ggCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cgga                                                           <  1:2607609/101‑3 (MQ=255)


        ggCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cgga                                                           <  1:5119247/101‑3 (MQ=255)


         gCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggag                                                          <  1:5892588/101‑4 (MQ=255)


         gCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggag                                                          >  1:5686398/1‑98 (MQ=255)


         gCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggag                                                          <  1:5150533/101‑4 (MQ=255)


         gCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggag                                                          <  2:4043993/101‑4 (MQ=255)


         gCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggag                                                          >  1:2129304/1‑98 (MQ=255)


          cAAGCTCGTCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagc                                                         <  2:2734914/101‑5 (MQ=255)


           aaGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagcc                                                        <  1:6168100/101‑6 (MQ=255)


           aaGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagac                                                        >  2:4426773/1‑96 (MQ=255)


            aGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagccc                                                       <  1:5741023/101‑7 (MQ=255)


             gCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagcccc                                                      <  2:3628615/101‑8 (MQ=255)


             gCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagcccc                                                      <  2:751006/101‑8 (MQ=255)


              cTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagccccc                                                     <  2:397328/101‑9 (MQ=255)


              cTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagccccc                                                     <  2:4909667/101‑9 (MQ=255)


              cTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagccccc                                                     <  2:2072434/101‑9 (MQ=255)


              cTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagccccc                                                     <  1:5251298/101‑9 (MQ=255)


               tCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagcccccg                                                    >  1:4060888/1‑92 (MQ=38)


               tCGGCTTCCAGAACGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagcccccg                                                    >  1:6308404/1‑92 (MQ=37)


                cGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagcccccgc                                                   >  1:5236487/1‑91 (MQ=38)


                                             cGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaa                               >  2:4888439/1‑101 (MQ=12)


                                             cGAAAAACA.CGGATCCCGCCCCTCTCTCATCTTGCCCTAAATACCT.....GGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaa                               <  2:5420628/101‑1 (MQ=2)


                                              gAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaaa                              >  2:385965/1‑101 (MQ=12)


                                              gAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaaa                              >  1:5449076/1‑101 (MQ=12)


                                              gAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaaa                              >  2:2652471/1‑101 (MQ=12)


                                              gAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGAGCGGCGCCCCCGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaaa                              >  2:2380062/1‑101 (MQ=12)


                                               aaaTAAC.CCGCCCCCCCCCCCCTCTCATCTTCCCCTAACTACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAAt                             <  2:599203/101‑1 (MQ=2)


                                               aaaTAAACCCGCCCCCGCCCCGCTCTCATCTTGCCCTAAATCCCG.....GGGGGGTGGGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaaa                              <  2:6528371/101‑1 (MQ=2)


                                               aaaTAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAAt                             >  1:5369622/1‑101 (MQ=9)


                                                aaTAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATc                            >  2:358374/1‑101 (MQ=9)


                                                 aTAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATcc                           >  1:6269538/1‑101 (MQ=9)


                                                  tAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCct                          >  1:3013033/1‑101 (MQ=9)


                                                  tAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCct                          >  1:2339168/1‑101 (MQ=9)


                                                   taacccaaccccgccccgcTCTCATCTTGCCCTAAATCCCTGGGGGGGGGGGGGGG.....GGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCct                          <  2:3210659/92‑1 (MQ=2)


                                                   aaacccacccccgccccgcTCTCATCTTGCCCTAAATCCCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCct                          <  2:1711473/92‑1 (MQ=2)


                                                   aaa.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctc                         >  1:1626629/1‑101 (MQ=9)


                                                   aaa.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctc                         >  2:3964083/1‑101 (MQ=9)


                                                   aaa.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctc                         >  2:3574807/1‑101 (MQ=9)


                                                   aaa.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctc                         >  2:5772795/1‑101 (MQ=9)


                                                    aa.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctct                        >  1:6587515/1‑101 (MQ=9)


                                                    aa.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctct                        >  1:727808/1‑101 (MQ=9)


                                                      cccgccccccccccgcTCTCATCTTCCCCTAAATCCCG.....CGGGGGTGCG.....GGGGCGGACCCCCCGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCtctc                       <  2:4751351/95‑1 (MQ=2)


                                                      cccGACCCCGCCCCGCTCTCATCTTGCCCTAAATCCCT.....GGGGGGGGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCtctc                       <  2:3034648/100‑1 (MQ=2)


                                                      cccGACCCCCCCCCGCTCTCATCTTGCCCTAAATCCCT.....CGGGGGTGCG.....GGGGGGGACCCCCCGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCtctc                       <  2:2836045/100‑1 (MQ=9)


                                                       ccGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCtctcc                      >  1:2119061/1‑100 (MQ=9)


                                                        cgcccccgccccgcTCTCATCTTGCCCTAAATCCCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCAc                     <  2:5620518/97‑1 (MQ=2)


                                                         gATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACg                    >  2:5101049/1‑101 (MQ=9)


                                                          aTCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACgg                   >  1:1179820/1‑101 (MQ=9)


                                                          aTCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACgg                   >  2:316377/1‑101 (MQ=9)


                                                          aTCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACgg                   >  1:1996565/1‑101 (MQ=9)


                                                          aTCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACgg                   >  1:3095966/1‑101 (MQ=9)


                                                          aTCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACgg                   >  1:4584641/1‑101 (MQ=9)


                                                          aTCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACgg                   >  1:4803610/1‑101 (MQ=9)


                                                          aTCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACgg                   >  2:1139332/1‑101 (MQ=9)


                                                           tCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGc                  >  1:1545029/1‑101 (MQ=9)


                                                               gcccctcTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCCATGGGAAATGCTCTCACGGCTTcc              >  2:3222714/1‑101 (MQ=2)


                                                               gccccgcTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTcc              >  1:1399708/1‑101 (MQ=9)


                                                               cccccgcTCTCATCTTGCCCTAAACCCCT.....CGGGGGTGGGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTcc              <  2:5218709/100‑1 (MQ=9)


                                                                ccccgcTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCa             >  2:2669166/1‑101 (MQ=9)


                                                                    gcTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTc         >  2:2015444/1‑101 (MQ=9)


                                                                    gcTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTc         >  1:6839975/1‑101 (MQ=9)


                                                                    gcTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTc         >  1:3758991/1‑101 (MQ=9)


                                                                    gcTCTCATCTTG.CCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCa        >  1:4312414/1‑101 (MQ=2)


                                                                     ctctCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCa        >  1:7125039/1‑101 (MQ=9)


                                                                     ctctCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCa        >  2:2603671/1‑101 (MQ=9)


                                                                      tctcATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAg       >  2:5053429/1‑101 (MQ=9)


                                                                      tctcATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAg       >  2:6389894/1‑101 (MQ=9)


                                                                      tctcATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGGTCAg       >  2:2293350/1‑101 (MQ=9)


                                                                       ctcATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAgg      >  2:3575244/1‑101 (MQ=9)


                                                                         cATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCANGGCTTCCAGTTCAggga    >  2:3059400/1‑99 (MQ=9)


                                                                         cATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaa    >  2:3697327/1‑101 (MQ=9)


                                                                         cATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaa    >  1:2029490/1‑101 (MQ=9)


                                                                         cATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaa    >  1:4424794/1‑101 (MQ=9)


                                                                          aTCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGTCTTCCAGTTCAAGaaa   >  2:459963/1‑101 (MQ=2)


                                                                          aTCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGGCGGGGCCCCCGCCGGGCCGCCTCGGGGAAAGGCGAGGGGAAATCCTCCCACGGCTTTTAGTTCGGGaaa   >  2:3194037/1‑101 (MQ=2)


                                                                           tCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAAt  >  2:632473/1‑101 (MQ=9)


TGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAA.CCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGAG.........CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAAT  >  NC_014034/1253790‑1253955

Base quality scores:


ATCG

< 3 ≤


ATCG

< 19 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG