BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 392474	136 (0.460)	37 (0.120)	21/166	22.7	0.24	intergenic (‑122/+21)	RCAP_rcc00363/trmD	hypothetical protein/tRNA (guanine‑N1)‑methyltransferase
*	?	NC_014034	2330313 =	95 (0.270)	37 (0.120)	21/166	22.7	0.24	intergenic (+288/+24)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

Only 100 of 151 total aligned reads displayed.


CGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCATTCGGCGA  >  NC_014034/392375‑392574


cgcAAGACTATGCGGCCCAACCGGGAGGGACAATGGCAGG.CCATTTCATCTTGCCTAAAATATCCCGGGGGTCC.GGGGGCGGCG..CCCCCGGCGGGTCGCCt                                                                                                            <  2:1192298/101‑1 (MQ=25)


  cAAGACTAGGCGGCCCAAGCGGGAGGGACAAGGGCAGG.CCATTTCATCTTGCCTCAAATACCCCGGGGGTCG.GGGGGCGGAG..CCCCCGGCGGGTCGCCTCg                                                                                                          <  2:1185080/101‑1 (MQ=21)


   aaGACTATGCGGCCCAAACCGGAGGGACAATGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGCGCCTCgg                                                                                                         >  2:3264146/1‑101 (MQ=255)


    aGACTGTGGGGCCCAAACGGGGGGGGCAATGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCG.GGGGGCGGAG..CCCCCGGCGGGTCGCCTCGgc                                                                                                        <  1:5699193/101‑1 (MQ=18)


     gACTATGCGGCCCAAACCGGAGGGACAATGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGGCTCgggg                                                                                                       >  1:2668753/1‑99 (MQ=255)


        taggCGGCCCAACCGGGAGGGACAAGGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCG.GGGGGCGGAC..CCCCGGGCGGGTCGCCTCGGC.GCAg                                                                                                   <  2:594199/98‑1 (MQ=21)


        tATGCGGCCCAAACCGGAGGGACAATGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGGCCCGgc.gcgg                                                                                                   >  1:4572173/1‑99 (MQ=21)


           ggggCCCAACCGGGAGGGCCAAGGGCAGG.CCTTTTCATCTTGCCTAAAATACCCGGGGGGTCG.GGGGGGGGAC..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCg                                                                                               <  2:891004/99‑1 (MQ=18)


           gCGGCCAAAACGGGAGGGACAAGGGCAGC.CCATTTCATCTTCCCTCAAATCCCCGGGGGGCCG.GGGGGCGGAC..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCg                                                                                               <  2:5195418/101‑1 (MQ=21)


            gggCCCCAAACGGGGGGGCAAAGGCCGGCCCATTTCATCTGCCCTAAAAT.CCCCGGGGGGCC.GGGGGGGGGGC.CCCCCGGCGGGTCGCCTCGGC.GCAG.CCg                                                                                               <  1:6599707/100‑1 (MQ=12)


             ggCCCAACCCGGGGGGACAATGGCAGG.CCATTTCATCTTGCCTCAAATACCCGGGGGGCCC.GGGGGCGGAC..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAg                                                                                             <  2:6481447/101‑1 (MQ=25)


              gCCCAAACCGGGGGGCAAAGGGGGGG.GCTTTTCCTTTTGCC.CAAAAATCCCCGGGGGGC.GGGGGGGGGGCCCCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAg                                                                                             <  1:3924038/101‑1 (MQ=9)


               cccAAACCGGAGGGACAATGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGCGGCTCGGC.GCGC.CCCAGGc                                                                                           >  2:472387/1‑101 (MQ=21)


               ccaaaaCCGGGGGGACAAGGCCAGG.CCTTTTCATCTTGCCTCAAATACCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGc                                                                                           <  2:6970750/98‑1 (MQ=21)


                     cgggggggACAAGGCCAGC.CCTTTTCATCTTCCCTAAAAAACCCGGGGGGGCC.GGGGGCGGAG..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATc                                                                                     <  1:5793334/96‑1 (MQ=18)


                        gAGGGACAATGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGGCGCCGC.GCCG.CCCAGGCGCAAACA.ca                                                                                 >  2:7065159/1‑100 (MQ=18)


                         aGGGACAATGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGCCCCCGG.GCGG.CCGCGGCGgaaaaacat                                                                                 >  1:143582/1‑95 (MQ=17)


                           ggACAGTGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGCG..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.c                                                                             <  2:1697967/101‑1 (MQ=255)


                            gACAATGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGCCCCGGC.GCCG.CCCCGGCGGAAACA.ccttgc                                                                             >  2:2854354/1‑96 (MQ=17)


                            gACAAGGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.cc                                                                            <  2:5593944/101‑1 (MQ=255)


                              cagtGGCCGG.CCTTTCCATCTTCCCTAAAATCCCCGGGGGGCCG.GGGGGCGGGC..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGa                                                                          <  2:3879741/98‑1 (MQ=16)


                               aaTGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGCGCCCGCGG.GGAG.CCCAGGCGGAAACA.CCTG.TCgca                                                                         >  2:47195/1‑99 (MQ=14)


                                 tGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGGCGCGGC.GCGG.CCGCGGCGGAAACA.ccttcccgacc                                                                        >  1:6060612/1‑91 (MQ=17)


                                 tGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGCCCCGGG.GGCG.CCGGGGGGGAAACA.CCTG.CCgcccc                                                                       >  2:3628883/1‑97 (MQ=14)


                                    cAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGCCCCCGC.GCCG.CCGCGGCGGAACAA.ATTG.CCGCACG.t.cc                                                                  >  2:5606793/1‑100 (MQ=14)


                                     ggg.CCTTTTCATCTTGCCTAAAATACCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.t.ct.c                                                                <  2:3703702/100‑1 (MQ=255)


                                          cttttcgccTTCCCACAAATACCCGGGGGGCCG.GGGGGCGGCC..CCCCGGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCcac                                                            <  2:3596727/93‑1 (MQ=21)


                                           aTTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGCCCCGGC.GCCG.CCGCGGCGGAACCA.CCTC.CCGCACT.T.CT.cccccc                                                           >  1:6722160/1‑98 (MQ=17)


                                             ttCATCTTGCCTCAAATCCCCGGGGGGTCG.GGGGGCGGAG..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACaaa                                                         <  2:1601322/101‑1 (MQ=37)


                                              tCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAAt                                                        <  2:7061217/101‑1 (MQ=255)


                                              tCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGCGGCCCCGC.GCAC.GCGGCGCGGAAACC.CTTG.CCCGACC.T.CT.ccccccccc                                                        >  1:918034/1‑95 (MQ=2)


                                              tCATCTTGCCTCAAATATCCCGGAGGTCC.GGGGGCGGAG..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAAt                                                        <  1:365857/101‑1 (MQ=255)


                                              gcgtCTGGCCTCAAATCGCCCGGGGGGCC.GGGGGCGGAG..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAAt                                                        <  2:1223294/98‑1 (MQ=37)


                                               taTCTGGCCTAAAATACCCCGGGGCTCC.GGGGGCGGAC..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATc                                                       <  2:1017454/100‑1 (MQ=25)


                                               cATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGCCCCGGC.GCGG.CCGCGGGGCAAACA.CTTG.CCCAACA.T.CT.ccccccaaac                                                       >  2:6272167/1‑94 (MQ=17)


                                               cATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGCGTCTCCGG.GGGG.CCCAGGGGGAAACA.CCCA.CCGAGCC.T.CT.CCCCCaaaac                                                       >  1:1121332/1‑99 (MQ=2)


                                               cATCTTGCCCCAAATACCCCGGGGGCCG.GGGGGCGGAT..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATc                                                       <  1:5380531/101‑1 (MQ=25)


                                                 tCTTGCCTCAAATTCCCGGGGGGCCC.GGGGGCGGAG..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCg                                                     <  2:591643/101‑1 (MQ=37)


                                                 tCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGCGCCCCGGC.GCCG.CCGCGGGGGAAACA.CCTGCCCGAAC..T.CT.cccccccaaccc                                                     >  1:3351992/1‑92 (MQ=9)


                                                 tCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGCGCCCCGGC.GCCG.CCGCGGCGCAAACA.CCTC.CCCCCCC.T.CT.CCCCCACATccc                                                     >  1:5246290/1‑100 (MQ=9)


                                                 tCTTCCCTCAAATACCCCGGGGGCCC.GGGGGGGGGC..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCg                                                     <  1:3278114/101‑1 (MQ=37)


                                                 tCTGGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCg                                                     <  2:2059317/101‑1 (MQ=255)


                                                  cTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGCGCCTCGGG.GCGG.CCGCGGGGAAAAAA.CTTG.CCCGACT.T.TT.CCCACAAAACCgc                                                    >  2:4904532/1‑100 (MQ=17)


                                                   tgcccTCAAAGACCCCGGGGGCCG.GGGGGCGGAC..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGgc                                                   <  2:4512580/98‑1 (MQ=37)


                                                    tGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGGCCCGGCGGCGC.CCGGGGCGAAA.CA.CCTG.CCCGACA.T.CT.CCCCCCAAACCCgcc                                                  >  2:5024156/1‑101 (MQ=2)


                                                    tGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGCCCCCGG.GCCG.CCCAGGCGGAAAAA.CATG.CCCCACC.T.CT.CCCCCaaaaaccgcc                                                  >  1:6563417/1‑94 (MQ=9)


                                                       cTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGCGGCTCGCC.GCGG.CCCAGGGGGAACAA.ACTG.CCCGACG.T.CT.CCCCCCAAACCGgccccc                                               >  2:4437266/1‑101 (MQ=9)


                                                         cAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGCGGCCCGGC.GGCG.CCGCGGGGGAAAAA.CCTG.CCGCGCC.T.CTCCCCCCAACACCGgccgcgg                                              >  2:956718/1‑99 (MQ=2)


                                                          aaactccccGGGGGGCCGGGGGGCGGCC..CCCCGGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCgg                                             <  2:2484692/95‑1 (MQ=25)


                                                          aaaTATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGGCGCGGG.GCCG.CCGCGGGGGAAACACCTTC.CCGACCTCT.CC.CCCACCAA.CCGGCCCCCgg                                             >  2:6483716/1‑101 (MQ=2)


                                                           aaTATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGCCTCGGG.GCGG.CCCGGGGGGAAACA.CCTG.CCGCGCC.T.CT.CCCACCAAACCCgccgcccggc                                           >  2:3505317/1‑97 (MQ=9)


                                                            atacCCGGGGGGTCC.GGGGGCGGAC..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTcc                                          <  2:368541/101‑1 (MQ=255)


                                                             tatCCCGGGGGTCC.GGGGGCGTAG..CCCCCGGCGGGGGGCCCCGGC.GCCG.CCGCGGCGGAAACA.CTTT.ACGCAAT.T.CT.CCCCCCACCCCCGCCGCCCGGccc                                         >  1:7017977/1‑101 (MQ=9)


                                                             tatCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGGCTCGGC.GCCG.CCGGGGCGGAAAAC.CCTG.CCGCACT.TCCT.CCCCCCAACCGGGCCCCCGGCcc                                          >  2:3470592/1‑101 (MQ=9)


                                                             tatCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGCCCCCGC.GGCG.CCGCGGGGGAAACA.CCTT.CCCGACC.T.CT.CCCCCCAAACCCGCCCCCCGGccc                                         >  1:3739403/1‑101 (MQ=0)


                                                              atCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGGGCCCCCGC.GCGG.CCGCGGCGGAAACA.CCTG.CCCAACT.T.CT.CCCCCAAAACCCGCCCCCCGGcccc                                        >  1:1886933/1‑100 (MQ=12)


                                                                 ccGGGGGCCG.GGGGGCGGCC..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGt                                     <  1:2194190/101‑1 (MQ=38)


                                                                  cGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGGCGCCCCGGC.GCGG.CCGCGGCGGAAACA.CCTT.CCGCACT.T.CT.CCCCCAAAACCCGGCGCCCGCCCcccgcc                                    >  2:4245417/1‑99 (MQ=12)


                                                                     ggggcgggggggCGACG..CCCCGGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCaa                                  <  1:1742333/94‑1 (MQ=37)


                                                                     gggGCC.GGGGGCGGAC..CCCCGGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCaaa                                 <  1:645978/101‑1 (MQ=255)


                                                                      ggggcggggggGGGCC..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCaaa                                 <  2:143579/95‑1 (MQ=37)


                                                                      gggcgggggggGGGCC..CCCCGGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCaaa                                 <  1:3115931/95‑1 (MQ=37)


                                                                      gggcgggggggGGGCC..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCaaa                                 <  1:7065533/95‑1 (MQ=37)


                                                                      gggccggggggCGGAC..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCaaa                                 <  2:6721818/95‑1 (MQ=255)


                                                                      ggTCC.GGGGGCGGAG..CCCCCGGCGGGGCGCCCCGGC.GCCGCCCGGGGGGAAAAAA.C.TG.CCGCACT.T.CTCCCCCCAAACCCGCCCCCCGGCccccgccccag                                 >  2:4029146/1‑93 (MQ=2)


                                                                       gTCC.GGGGGCGGAG..CCCCCGGCGGGGCGGCCCGGC.GCCG.CCGAGGCGGAAACA.CCTG.CCGCACC.T.CT.CCCCCCAAACCCCCCGCCCGCccccccgcacacc                               >  2:5418659/1‑91 (MQ=9)


                                                                       gTCC.GGGGGCGGAG..CCCCCGGCGGGGCGCCCCGGC.GCAG.CCGAGGCGGAAAAA.CTTG.CCGAACT.T.CT.CCCCCCAAACCGGCCGCCGGTCCCCCGTCCAAGc                               >  2:3992596/1‑101 (MQ=25)


                                                                          c.GGGGGCGGAG..CCCCCGGCGGGGCGCCTCGGG.GGAG.GCGCGGCGGAATCA.CTTG.CCGCACT.T.CT.CCCCCAAATCCGGGCCCCCGGCCcgcggctcaacttc                            >  2:3045570/1‑91 (MQ=16)


                                                                          c.GGGGGCGGAG..CCCCCGGCGGGGCGCCCCGGC.GCCG.CCGCGGCGGAAACA.CTTG.CCGCAAC.T.CT.CCCCCCCAACCCGCCCCCGGGGCCGCCTCCAAGCCTc                            >  2:3217691/1‑101 (MQ=9)


                                                                          c.GGGGGCGGAG..CCCCCGGCGGGGCGCCCCCGC.GCCG.CCGCGGGGGAAAAA.CCTT.CCCGACT.T.CT.CCCCCAAATCCCGCCCCCGGGCCcgcggcccagcgtc                            >  2:2951973/1‑91 (MQ=9)


                                                                             ggggCGGAG..CCCCCGGCGGGGCGCCCCGGG.GCGG.CCCCGGGGGAAAAA.CTTG.CCCAAAC.T.CT.CCCCCCCAACCCGCCCCCGGGCCCGCGCCAAAACCTCGc                          >  1:6662377/1‑101 (MQ=2)


                                                                             ggggCGGAG..CCCCCGGCGGGGCGCCCCGGC.GCCG.CCGAGGGGGAAAAA.CTTG.TCGCACC.T.CT.CCCCCCAAACCGGCCGCCCGGCCCCCGCCCCAGCCTCGc                          >  2:1777889/1‑101 (MQ=9)


                                                                                gggcgcgccccgcGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGct                         <  2:2140656/93‑1 (MQ=255)


                                                                                 cGGCG..CCCCCGGCGGGCCCCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTg                      <  2:1521204/101‑1 (MQ=255)


                                                                                  gtaG..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTgc                     <  2:2958194/99‑1 (MQ=255)


                                                                                  ggggccccccgGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGctct                       <  2:2434429/95‑1 (MQ=255)


                                                                                  ggcg..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTgc                     <  1:6060741/98‑1 (MQ=255)


                                                                                  gcgacccccccGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGctct                       <  2:3813492/95‑1 (MQ=255)


                                                                                   gAG..CCCCGGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTgcg                    <  2:1792500/101‑1 (MQ=255)


                                                                                   gAG..CCCCCGGCGGGGCGCCCCGGG.GCCG.CCGCGGGGAAAACA.CTTG.CCGAACT.T.CT.CCCCCAAAACCCGCCGCCGGGCCCCCGTCACAGCGTCGcccttcc                    >  2:4294181/1‑98 (MQ=255)


                                                                                    gcccccccgGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTgc                     <  1:4984471/97‑1 (MQ=255)


                                                                                    aG..CCCCCGGCGGGGCGCCTCGGC.GCAG.CCGCGGCGGAAACA.CTTG.CCGAACT.T.CT.CCCCCAAAACCCGCCGCCCGGCCCGCGGCAAAGCCTCGCCCTgcgc                   >  2:6208551/1‑101 (MQ=255)


                                                                                              gcggGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCgccgcc           >  1:386972/1‑101 (MQ=255)


                                                                                              gcggGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCgccgcc           >  1:2806776/1‑101 (MQ=255)


                                                                                               cggGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCa          >  1:4273976/1‑101 (MQ=255)


                                                                                               cggGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCa          <  1:1963627/101‑1 (MQ=255)


                                                                                               cggGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCa          >  1:898588/1‑101 (MQ=255)


                                                                                                gggTCGCCTGGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CC.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCAt         <  2:1633717/101‑1 (MQ=255)


                                                                                                gggTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCAt         >  2:86120/1‑101 (MQ=255)


                                                                                                gggTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCAt         <  1:1405105/101‑1 (MQ=255)


                                                                                                 ggTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCAtt        >  1:1899395/1‑101 (MQ=255)


                                                                                                 ggTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCAtt        >  1:5091533/1‑101 (MQ=255)


                                                                                                 ggTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCCCGCCGCCaac        >  2:2923958/1‑99 (MQ=255)


                                                                                                 ggTCGCCGCGGC.GCAG.CCGAGGCGAAATCC.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCAtt        <  1:358986/101‑1 (MQ=255)


                                                                                                  gTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCATTc       <  2:2668657/101‑1 (MQ=255)


                                                                                                  gTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCATTc       >  1:1306460/1‑101 (MQ=255)


                                                                                                    cGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCATTCgg     >  1:7040942/1‑101 (MQ=255)


                                                                                                    cGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCATTCgg     >  1:1225521/1‑101 (MQ=255)


                                                                                                       cTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCATTCGGCGa  >  1:1725875/1‑101 (MQ=255)


                                                                                                       cTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCATTCGGCGa  >  1:106120/1‑101 (MQ=255)


CGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGG.CCATTTCATCTTGCCTCAAATATCCCGGGGGTCC.GGGGGCGGAG..CCCCCGGCGGGTCGCCTCGGC.GCAG.CCGAGGCGAAATCA.CTTG.CCGAACT.T.CT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCATTCGGCGA  >  NC_014034/392375‑392574

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG