BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1303934 =	171 (0.500)	112 (0.330)	28/190	22.0	0.30	intergenic (+121/+36)	urtE/RCAP_rcc01231	urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
*	?	NC_014034	2578420 =	346 (0.970)	112 (0.330)	28/190	22.0	0.30	intergenic (+29/+141)	purU/pgi	formyltetrahydrofolate deformylase/glucose‑6‑phosphate isomerase
Rejected: Position hash score below cutoff.

Only 100 of 203 total aligned reads displayed.


TTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....C....GCCAAGATGGGG...G..GC.CCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAGCGCG  >  NC_014034/1303856‑1304033


tttGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGgggcg                                                                                      >  1:5547448/1‑101 (MQ=14)


   ggggCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGgggcgggc                                                                                   <  1:316762/101‑1 (MQ=14)


   ggggCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGgggcgggc                                                                                   >  1:999296/1‑101 (MQ=14)


     ggCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccg                                                                                 >  2:360512/1‑101 (MQ=14)


       cAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgca                                                                               <  1:1283431/101‑1 (MQ=14)


       cAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgca                                                                               >  1:2883858/1‑101 (MQ=14)


        aaGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgcag                                                                              >  2:6262244/1‑101 (MQ=14)


         aGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgcagg                                                                             >  2:159717/1‑101 (MQ=14)


         aGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgcagg                                                                             >  1:1583621/1‑101 (MQ=14)


          gATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCAGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgcaggg                                                                            >  1:5104379/1‑101 (MQ=9)


           aTAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgcagggc                                                                           >  1:1153204/1‑101 (MQ=14)


           aTAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGGGAATTGGCGGAAG....GCCAAGAGGGGG...GAAGCGTCTCCT.TTT.CGGGGCggggcgcagggg                                                                           >  1:6923272/1‑100 (MQ=9)


            tAAGCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAGGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgcagggcc                                                                          <  2:815626/101‑1 (MQ=9)


            tAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgcagggcc                                                                          >  2:5676724/1‑101 (MQ=14)


            tAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgcagggcc                                                                          >  2:5318881/1‑101 (MQ=14)


            tAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgcagggcc                                                                          >  1:1013146/1‑101 (MQ=14)


             aaaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgcagggccg                                                                         >  2:4192061/1‑101 (MQ=14)


             aaaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgcagggccg                                                                         >  1:1728113/1‑101 (MQ=14)


              acccccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgcagggccgc                                                                        <  1:4954757/99‑1 (MQ=9)


              aaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgcagggccgc                                                                        >  2:5333237/1‑101 (MQ=14)


               aCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCgggccgcagggccgca                                                                       <  2:6886769/101‑1 (MQ=14)


                ccccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCAc                                                                      <  1:3800308/101‑1 (MQ=14)


                  ccATCCTTTCACCTTGCCGCAAATATCGCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCAccc                                                                    <  1:4061160/101‑1 (MQ=9)


                  ccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCAccc                                                                    <  2:4993067/101‑1 (MQ=14)


                  ccATCCTTCCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCAccc                                                                    <  2:3235498/101‑1 (MQ=9)


                   cATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCt                                                                   <  1:966076/101‑1 (MQ=14)


                    aTCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTg                                                                  <  1:92541/101‑1 (MQ=14)


                     tCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGt                                                                 <  1:5263567/101‑1 (MQ=14)


                     tCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGt                                                                 >  2:153724/1‑101 (MQ=14)


                      ccTTTCGCCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCGAAGAGGGGG...GCAGCTCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTc                                                                <  1:4350733/101‑1 (MQ=9)


                       cTTTCACCTTGCCGCAAATATCCCGGGGGGTGAGTTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGTCCCACCCTGTcc                                                               >  1:3712160/1‑100 (MQ=2)


                       cTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCa                                                               <  2:2574482/101‑1 (MQ=14)


                       cTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCa                                                               >  1:227348/1‑101 (MQ=14)


                       cTTTCACCTTGCCGCAAATAGCCCGGGGGGTGAATTGGC....CGAGGGCCAAGAGGCGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCa                                                               <  2:1736497/101‑1 (MQ=12)


                        tttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAg                                                              <  1:6074539/101‑1 (MQ=14)


                        tttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAg                                                              <  2:2977605/101‑1 (MQ=14)


                        tttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAg                                                              >  1:5378117/1‑101 (MQ=14)


                        tttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAg                                                              >  2:7061180/1‑101 (MQ=14)


                        tttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAg                                                              >  1:5510733/1‑101 (MQ=14)


                         ttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAgc                                                             >  1:4326264/1‑101 (MQ=14)


                         ttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAgc                                                             >  1:3580424/1‑101 (MQ=14)


                          tCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAgcg                                                            <  2:1829987/101‑1 (MQ=14)


                          tCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAgcg                                                            >  1:5992383/1‑101 (MQ=14)


                           cACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAgcgc                                                           >  2:2463198/1‑101 (MQ=17)


                           cACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAgcgc                                                           <  1:1863180/101‑1 (MQ=17)


                            aCCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCa                                                          >  2:4443767/1‑101 (MQ=17)


                             ccgtGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCAt                                                         <  2:470746/98‑1 (MQ=9)


                             ccTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCAt                                                         >  1:1906229/1‑101 (MQ=17)


                             cactGCCGCAAATATCCCGGGGGGTCAATTGGC....CGAAGGCCAAGAGGGGGGCAG..GG.CCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCAt                                                         <  2:1177165/98‑1 (MQ=12)


                              cTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATc                                                        <  1:3900201/101‑1 (MQ=17)


                              cTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATc                                                        >  1:6808171/1‑101 (MQ=17)


                                tGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCACCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATccc                                                      <  2:4858626/101‑1 (MQ=12)


                                 gCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATcccc                                                     <  1:4314801/101‑1 (MQ=17)


                                 gCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCACGGACGCACCCTGTCAGCGCATcccc                                                     >  2:3986940/1‑101 (MQ=9)


                                  ccGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCa                                                    <  2:5778661/101‑1 (MQ=17)


                                  ccGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCa                                                    <  1:1471437/101‑1 (MQ=17)


                                  ccGCAAAGAGCCGGGGGGGTGAATGGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCa                                                    <  1:4635956/101‑1 (MQ=12)


                                   cGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGCGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCaa                                                   >  1:1205508/1‑101 (MQ=12)


                                    gCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAg                                                  >  2:585301/1‑101 (MQ=17)


                                     cAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgc                                                 >  2:5826098/1‑101 (MQ=17)


                                     cAAATATCCCGGGGGGCGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgc                                                 >  2:857415/1‑101 (MQ=12)


                                      aaaTATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcc                                                >  2:5606255/1‑101 (MQ=17)


                                      aaaTATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcc                                                >  1:3244669/1‑101 (MQ=17)


                                      aaaTATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcc                                                >  2:5732868/1‑101 (MQ=17)


                                       aaTACCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgccc                                               <  2:2035705/101‑1 (MQ=12)


                                        atgtCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccg                                              <  1:580071/98‑1 (MQ=12)


                                        atatCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccg                                              <  2:3088182/101‑1 (MQ=17)


                                         tatCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgc                                             <  1:4144581/101‑1 (MQ=18)


                                          atCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgcc                                            >  2:3419398/1‑101 (MQ=18)


                                           tCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GAAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGCCAGCGCATCCCCAAgcccgccc                                           >  1:5452988/1‑101 (MQ=16)


                                            cccGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGcccgcccg                                          >  1:4518987/1‑101 (MQ=18)


                                            cccGGGGGGTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGcccgcccg                                          <  2:2945313/101‑1 (MQ=18)


                                               ggggggTGAATTGGC....CGAAGGCCAAGAGGGGG...GCAGCGCCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCAt                                       >  1:3537766/1‑101 (MQ=18)


                                                                                gggcgcccccc.cccctT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGc            <  1:1377253/91‑1 (MQ=255)


                                                                                 gggggcgccc.cccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCa           <  2:3620631/92‑1 (MQ=255)


                                                                                   ggggcagcgcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCAt          <  1:3931336/92‑1 (MQ=255)


                                                                                   ggcccccc.cccctT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATa         <  2:5923863/94‑1 (MQ=255)


                                                                                   ggcccccc.cccctT.TTT.CGGCGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATa         <  1:5606545/94‑1 (MQ=255)


                                                                                   ggcacggcgcccccT.TTC.CGGGGCGGGCCGCAGGGCCGCCCCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCAt          <  2:6604750/92‑1 (MQ=255)


                                                                                   gccccccc.cccctT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATa         <  2:5377845/94‑1 (MQ=255)


                                                                                    gggcagcgcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATa         <  1:752220/93‑1 (MQ=255)


                                                                                    ggccccc.cccccT.TTTGCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATa         <  1:5733170/95‑1 (MQ=255)


                                                                                    gccagcc.cccccT.GTC.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATaa        <  2:1728049/95‑1 (MQ=255)


                                                                                     ggcagcgcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATaa        <  1:2121524/94‑1 (MQ=255)


                                                                                     ggcagcgcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATaa        <  2:516891/94‑1 (MQ=255)


                                                                                      gcagcgcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCTCCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGCGTCTTGCGCACCGGCTTGAACGCATaaa       <  1:6278970/95‑1 (MQ=255)


                                                                                      gcagcgcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCCTCAGGGTCTTGCGCACCGGCTTGAACGCATaaa       <  1:5006791/95‑1 (MQ=255)


                                                                                      gcagcgcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATaaa       >  1:2566596/7‑101 (MQ=255)


                                                                                       cagcgcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAg      <  1:4273862/96‑1 (MQ=255)


                                                                                       cagcgcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAg      >  1:3035622/6‑101 (MQ=255)


                                                                                       cagcgcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAg      <  1:2603630/96‑1 (MQ=255)


                                                                                        gcc.cccctT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgcg    <  2:5104119/99‑1 (MQ=255)


                                                                                        cgC.CCCCCTGTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgc     <  2:1872063/100‑1 (MQ=255)


                                                                                        agcgcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgc     <  2:5089088/97‑1 (MQ=255)


                                                                                        agcgcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgc     >  1:5523431/5‑101 (MQ=255)


                                                                                          cgcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgcgc   <  2:5297061/99‑1 (MQ=255)


                                                                                           gcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCCGCGCATCCCCAAGCCCGCCCGCATCAGGGGCTTGCGCACCGGCTTGAAAGCCCAAAacgcc  >  1:2758837/2‑100 (MQ=255)


                                                                                           gcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgcgcg  >  1:342622/2‑101 (MQ=255)


                                                                                           gcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgcgcg  >  1:6561897/2‑101 (MQ=255)


                                                                                           gcccccT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgcgcg  <  1:242436/100‑1 (MQ=255)


TTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....C....GCCAAGATGGGG...G..GC.CCCCCT.TTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAGCGCG  >  NC_014034/1303856‑1304033

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG