New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 233029084 (0.260)65 (0.200) 33/180 18.9 0.32 intergenic (+265/+47) RCAP_rcc02161/mrcA hypothetical protein/penicillin‑binding protein 1A
?NC_014034 3276374 = 189 (0.530)intergenic (‑126/+123) RCAP_rcc03082/RCAP_rcc03083 lipoprotein/membrane bound YbgT‑like protein
Rejected: Position hash score below cutoff.

Only 100 of 130 total aligned reads displayed.

CGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCCGGG..G....GCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCG  >  NC_014034/2330190‑2330374
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cGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtcc                                                                                             >  2:453103/1‑101 (MQ=255)
 ggCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccg                                                                                            >  1:4201343/1‑100 (MQ=255)
   cGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccggg                                                                                          >  1:4174193/1‑101 (MQ=255)
    gTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg                                                                                         >  2:6994677/1‑101 (MQ=255)
    gTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg                                                                                         >  2:5821613/1‑101 (MQ=255)
    gTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg                                                                                         >  1:3738365/1‑101 (MQ=255)
    gTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg                                                                                         >  1:3635343/1‑101 (MQ=255)
    gTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtccccggggtccgggg                                                                                         >  2:6681898/1‑101 (MQ=255)
     tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..g                                                                                      >  1:3538518/1‑101 (MQ=255)
     tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..g                                                                                      >  1:1169066/1‑101 (MQ=255)
     tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccggggggccgggg..g                                                                                      >  2:680591/1‑101 (MQ=255)
     tATTTGCGACAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccggggggccgggg..g                                                                                      >  2:2102633/1‑101 (MQ=255)
      aTTTGCGCCAAGAAAAAGGCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gc                                                                                     <  2:3577094/101‑2 (MQ=255)
      aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gc                                                                                     >  2:113886/1‑100 (MQ=255)
        ttGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcgg                                                                                   <  2:6597681/101‑4 (MQ=255)
         tGCGCCAACAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcgga                                                                                  <  2:5646693/101‑5 (MQ=255)
          gcgcCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggag                                                                                 >  1:1800642/1‑96 (MQ=255)
           cgcCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagc                                                                                <  2:2824134/101‑7 (MQ=255)
             ccAAGAAAAAGCCGGGGCGCTCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccggggggccgggg..gcgcatccc                                                                              <  1:6854596/101‑9 (MQ=255)
             ccAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagccc                                                                              >  2:1080742/1‑93 (MQ=255)
              cAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagcccc                                                                             >  1:5214454/1‑92 (MQ=38)
               aaGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagccccc                                                                            >  1:2913119/1‑91 (MQ=38)
               aaGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg..gcggagccccc                                                                            <  2:488404/101‑11 (MQ=38)
               aaGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGT.CCGGG..G....Gcggagccccc                                                                       <  2:3081204/101‑10 (MQ=38)
                aGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGT.CCGGG..G....Gcggagcccccg                                                                      <  1:6726111/101‑11 (MQ=38)
                aGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGT.CCGGG..G....Gcggagcccccg                                                                      <  1:3049544/101‑11 (MQ=38)
                         cGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGc                                                                  >  2:4128519/1‑101 (MQ=25)
                             gcgcgcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAg                                                              <  2:324748/101‑1 (MQ=25)
                                ggcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGCCGGGTCGCCCAGGCa                                                           <  1:6869086/100‑1 (MQ=21)
                                 gcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCAt                                                          >  1:1864656/1‑101 (MQ=25)
                                 gcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGGggggg                                                          >  1:6594473/1‑98 (MQ=21)
                                  cATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATc                                                         <  1:1453312/101‑1 (MQ=25)
                                   aTGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGcccgcggagcg                                                        >  2:2238722/1‑92 (MQ=18)
                                     gCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGcc                                                      <  1:7059837/101‑1 (MQ=25)
                                     gCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGGCGAGGCATCGcc                                                      >  2:59478/1‑101 (MQ=21)
                                     gCGGGCCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGcc                                                      <  1:4128714/101‑1 (MQ=21)
                                       ggggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.c                                                   <  2:3142352/101‑1 (MQ=25)
                                       ggggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.c                                                   <  2:1864584/101‑1 (MQ=25)
                                        gggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCCGGGCAGCGccccc                                                   >  2:4547864/1‑98 (MQ=18)
                                            cccGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.Cgagat                                              >  2:2311441/1‑97 (MQ=21)
                                              cGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCCCGGGACCGCCC.CCGCGaaa                                            >  1:6184276/1‑101 (MQ=12)
                                                  ccACCGGCCTCCCTGCCGCCTTTCCCCTGGGGCCAAAGCGCCCGGGTGTCCTGGGCCGCC..GCCCCCGGCGGCTCTCCGAGGCATCGCCT.CGGCGAAATccc                                        <  2:6955910/100‑1 (MQ=255)
                                                   cACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGGGCCCGGGGAACGCCC.CGGCGGAAAcccc                                       >  1:4428821/1‑100 (MQ=9)
                                                    cccGGCGGCCGGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCtt                                      <  2:2620781/100‑1 (MQ=21)
                                                    aCCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGGGGGAGCGCCC.CCGCGGAAAcccct                                      >  1:567460/1‑99 (MQ=9)
                                                     ccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTa                                     <  2:403946/101‑1 (MQ=25)
                                                     ccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGGGGCCTCGCCC.CTGCgccaaccccta                                     >  2:4081402/1‑91 (MQ=12)
                                                        gcggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTa                                  <  2:6361297/101‑1 (MQ=25)
                                                        gcctcccCGGCGGGTTTCCCCTGGGGCAAAAGGACCCGGGGGGCCGGGG..GGGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTa                                  <  1:3306320/97‑1 (MQ=12)
                                                         cggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTaa                                 <  2:3060830/101‑1 (MQ=25)
                                                          ggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTaaa                                <  2:5061430/101‑1 (MQ=25)
                                                          ggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGTGCCGAGGCATCGCCC.CGGCGAAAACCCCTAGTaaa                                >  2:6779831/1‑101 (MQ=18)
                                                           gcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAg                               <  1:6986824/101‑1 (MQ=25)
                                                            cccGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGCGGGAGCGCCC.CCGCGGAAAACCCTAGTaaaaa                              >  1:610043/1‑99 (MQ=9)
                                                             ccGGGCGGCTTTCCCCTGGGGCCAAAGATCCGGGGGGTCGGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGAc                             <  1:1575091/101‑1 (MQ=21)
                                                             ccGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGAc                             <  1:5821915/101‑1 (MQ=25)
                                                             ccGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGAc                             <  1:1866282/101‑1 (MQ=25)
                                                             ccGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCACCGCCT.CGGCGAAATCCCTTAGTAAAGAc                             <  1:5061324/101‑1 (MQ=21)
                                                              cGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGAcc                            <  2:4917268/101‑1 (MQ=25)
                                                              cGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGGGCCGGGGGCTCGCCC.CCGGGGAAACCCCTAGTaaaaaac                            >  1:6786019/1‑97 (MQ=2)
                                                               gggCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGAccg                           <  2:2633754/101‑1 (MQ=25)
                                                               gggCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGGATCGCCTCCGGCAAAACCCCTT.GTaaaaaacc                           >  2:1989063/1‑96 (MQ=9)
                                                                  cggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGAccgccc                        <  2:5214189/101‑1 (MQ=25)
                                                                  cggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGGGGGATCCCCC.CGGGGGAAACCCCTAGTAAAGAccgccc                        >  1:3889601/1‑101 (MQ=9)
                                                                   ggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCCAGGCATCGCCC.CCGCGCAAACCCCTAGTAAAAAccccccc                       >  2:2372298/1‑100 (MQ=9)
                                                                    gcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTGGCCGCGGCATCGCCC.CCGCGGAATCCCCTCGTTAAAAcccccccc                      >  1:6663816/1‑99 (MQ=9)
                                                                      tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCgg                    <  2:3194620/101‑1 (MQ=21)
                                                                      tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCC.CCGCCAAATCCCCTAGTAAAAACCCCCCGCgg                    >  1:2483668/1‑101 (MQ=12)
                                                                      tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCCGGGGATCGCCC.CGGCGAAAACCCCTTGTAAAAAACGCCCCCgg                    >  1:796967/1‑101 (MQ=2)
                                                                      tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCCCCGCGGCATCGCCT.CCGCGCAAGACCGCAGTAAAAACCGCCCGCgg                    >  1:7070388/1‑101 (MQ=9)
                                                                       ttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGCGGGAGCGCCT.CGGCGGAAACCCCTAGTAAAAAACGCCCGCggg                   >  1:1524455/1‑100 (MQ=9)
                                                                       ttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGCGGCATCGCCC.CCGCGCAAAACCCTAGTAAAAAccgccccccgg                   >  2:6556563/1‑96 (MQ=9)
                                                                       ttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGGCGCCGCT.CCGCGGAATCCCCTCGTTAAGAacgccccccgc                   >  1:5990560/1‑96 (MQ=0)
                                                                        tCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGAc                  <  1:453115/101‑1 (MQ=21)
                                                                         cACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCC.CCGCGGAAACCCCTAGTAAAAACCGCCCGCGGGCa                 >  2:2821029/1‑101 (MQ=12)
                                                                         cACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCGTCGCCC.CGGCGAAAACCCCTAATAAAGAACGCCCGCGGAcc                 >  2:3780056/1‑100 (MQ=12)
                                                                          aCCTGGGGCCAAAGATCCGGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAg                <  1:6576892/101‑1 (MQ=21)
                                                                          aCCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGGGGCATCGCCT.CGGCGGAAACCCCTAGTAAAAAACGCCCCCGGCCAg                >  1:1973895/1‑101 (MQ=9)
                                                                           ccTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAgg               <  2:3472152/101‑1 (MQ=21)
                                                                           ccTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCT.CCGCGCAAACCCTTAGTAAAGAACGCCCGCGGACAgg               >  2:6442890/1‑101 (MQ=18)
                                                                            cTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGCGGGCTCGCCC.CGGCGGAATCCCTCAGTCAAGAACGCCCCCGGCCCggg              >  1:2291907/1‑101 (MQ=2)
                                                                            cTGGGGCCAAAGAGCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAggg              <  2:3845483/101‑1 (MQ=21)
                                                                             tGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCCAGGCATCCCCG.CGGCGAAAAACCCTAGTAAAGAACGCCCCCGGGCAgcgg             >  2:6165805/1‑98 (MQ=2)
                                                                              ggggCCAAATGTCCCGGGGGTCGGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGAt            <  2:244564/101‑1 (MQ=21)
                                                                              ggggCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGGATCGCCC.CGGCGGAAACCCCTAGTAAAGACCGCCCCCGGGCAgggga            >  2:3924900/1‑99 (MQ=9)
                                                                               gggCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATc           <  2:6898704/101‑1 (MQ=21)
                                                                               gggCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCC.CGGCGGAAACCCTTAGTAAAAAACGCCCCCGGGCAGGGagc           >  1:2171409/1‑99 (MQ=9)
                                                                               gggCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCC.CGGCGGAAACCCCTAGTAAAGAACCCCCGCCGACAGGGaac           >  2:2566433/1‑99 (MQ=9)
                                                                                ggCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATcc          <  1:6237290/101‑1 (MQ=21)
                                                                                ggCCAAAGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCC.CCGCGAAAACCCCTAGTAAAAACCGCCCCCgggccagggacc          >  2:4726457/1‑91 (MQ=9)
                                                                                  ccAAAGACCCCGGGGGCCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGa        <  1:3666250/101‑1 (MQ=21)
                                                                                    aaaGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGCGGCATCGCCC.CGGCGAAATCCCTTAGTAAAAACCCCCCCCGGGCAGGGATCCGCAg      >  2:3890207/1‑101 (MQ=9)
                                                                                    aaaGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCC.CCGCGAAAACCCCTAGTAAAAAACGCCCGCGGACAggggaccgcag      >  2:3614171/1‑93 (MQ=9)
                                                                                     aaGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGGATCGCCC.CGGCGAAAACCCTTAGTAAAGACCGCCCCCGGGCAGGGACCCGAAgg     >  2:5591370/1‑101 (MQ=12)
                                                                                     aaGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCC.CGGCGAAATCCCTTAGTAAAAAACCCCCCCGGACAGGGAGCCGAAgg     >  1:582409/1‑101 (MQ=12)
                                                                                     aaGATCCCGGGGGGCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAgg     <  1:2769629/101‑1 (MQ=25)
                                                                                      aGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGGGCCGGGGCATCGCCC.CGGCGAAAACCCTTAGTAAAGACCGCCCGCGGGCCGGGAGCCGAAggg    >  1:2609330/1‑100 (MQ=12)
                                                                                      aGATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGGCGCCGAGGCATCGCCT.CGGCGGAAACCCCTAGTAAAAACCGCCCGCGGGCCGGGGGCCGAAggg    >  2:6013784/1‑100 (MQ=9)
                                                                                       gATCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTc   <  1:535481/101‑1 (MQ=25)
                                                                                        aTCCCGGGGGTCCGGGG..GCGGAGCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCg  <  1:4688734/101‑1 (MQ=25)
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CGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCCGGG..G....GCCCCCGGCGGGTCGCCGAGGCATCGCCT.CGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCG  >  NC_014034/2330190‑2330374

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG