BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	235596 =	199 (0.560)	54 (0.150)	4/200	37.9	0.27	intergenic (+25/+186)	RCAP_rcc00200/RCAP_rcc00201	MarR family transcriptional regulator/adenine‑specific DNA‑methyltransferase
*	?	NC_014034	900797 =	90 (0.250)	54 (0.150)	4/200	37.9	0.27	intergenic (‑126/‑161)	ldh/ftsW	L‑lactate dehydrogenase/cell division protein FtsW
Rejected: Position hash score below cutoff.

Only 100 of 233 total aligned reads displayed.


CGACATCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..CCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTCACA  >  NC_014034/235496‑235696


cgACATCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..c                                                                                                        <  1:1121753/101‑1 (MQ=255)


    aTCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..ccc..cc                                                                                                  <  2:2015120/101‑2 (MQ=255)


     tCGGCGCCGACAAGGTCCGCTCCGCATTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..ccc..ccc                                                                                                 <  1:4375972/101‑3 (MQ=255)


     tCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCCTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..ccc..ccc                                                                                                 <  1:3539481/101‑3 (MQ=255)


       ggCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..ccc..cccgc                                                                                               <  2:1323271/101‑5 (MQ=255)


         cgcCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..ccc..cccgcac                                                                                             <  1:4839128/101‑7 (MQ=255)


           ccGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..ccc..cccgcaccc                                                                                           <  1:2571617/101‑9 (MQ=255)


              aCAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCAcccccc                                                                                          <  1:5193614/101‑1 (MQ=255)


               cAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCg                                                                                         <  1:5537406/101‑1 (MQ=255)


               cAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCg                                                                                         <  1:2075807/101‑1 (MQ=255)


                 aGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCggg                                                                                       <  2:4684747/101‑1 (MQ=255)


                      cgcgCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTAt                                                                                  <  2:6681902/101‑1 (MQ=255)


                       gcgcCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTAtt                                                                                 <  1:3988755/101‑1 (MQ=255)


                            cccTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCAc                                                                            <  2:6301002/100‑1 (MQ=255)


                             ccTTGCCTGTGCTCCCTCAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCTGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCAcc                                                                           <  2:5702568/101‑1 (MQ=25)


                             ccTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCAcc                                                                           <  1:855303/101‑1 (MQ=255)


                              cTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCa                                                                          <  1:372307/101‑1 (MQ=255)


                              cTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCa                                                                          <  2:158720/101‑1 (MQ=255)


                              cTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCa                                                                          <  2:4311843/101‑1 (MQ=255)


                              cTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCa                                                                          <  2:543400/101‑1 (MQ=255)


                              cTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGACCCC..CGCACCCCCCGGGCGTATTTGCACCa                                                                          <  1:466743/101‑1 (MQ=255)


                                tGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAg                                                                        <  2:6834016/101‑1 (MQ=255)


                                tGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAg                                                                        <  2:6909577/101‑1 (MQ=255)


                                 gCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGa                                                                       <  1:3831925/101‑1 (MQ=255)


                                  cccGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGaa                                                                      <  2:2599962/101‑1 (MQ=255)


                                   ccGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGaaa                                                                     <  2:5269157/101‑1 (MQ=255)


                                   ccGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGaaa                                                                     <  2:4235590/101‑1 (MQ=255)


                                    cGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGaaaa                                                                    <  1:1031712/101‑1 (MQ=255)


                                     gTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCCCCCCCCGGGCGTATTTGCACCAAGaaaaa                                                                   <  1:1979723/101‑1 (MQ=255)


                                     gTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGaaaaa                                                                   <  2:4949741/101‑1 (MQ=255)


                                     gTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGaaaaa                                                                   <  1:579064/101‑1 (MQ=255)


                                          gcgcGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGaa                                                              <  2:1016597/101‑1 (MQ=255)


                                           cgcgAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAAc                                                             <  1:3299700/101‑1 (MQ=255)


                                              gatttGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACggg                                                          <  2:5467846/98‑1 (MQ=38)


                                               aaTTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGt                                                         <  2:113785/101‑1 (MQ=255)


                                                 ttGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGttt                                                       <  1:2510551/101‑1 (MQ=255)


                                                  tgcggctgcggcTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTttc                                                      <  2:2788625/101‑1 (MQ=255)


                                                   gcggctgcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTttct                                                     <  2:5097739/101‑1 (MQ=255)


                                                   gcggctgcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTttct                                                     <  2:2994296/101‑1 (MQ=255)


                                                    cggctgcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTttctt                                                    <  1:5642511/101‑1 (MQ=255)


                                                      gtagcgccgcGAGAAAAGCTGAGGCCGCGGAACGGGGAGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTtcttct                                                  <  2:6247272/92‑1 (MQ=25)


                                                      gctgcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTtcttct                                                  <  1:6559795/101‑1 (MQ=255)


                                                       gtgcgggcCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTcttctt                                                 <  1:4546514/100‑1 (MQ=37)


                                                       ctgcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTcttctt                                                 <  2:242106/101‑1 (MQ=255)


                                                       ctgcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTcttctt                                                 <  1:4298661/101‑1 (MQ=255)


                                                        tgcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTg                                                <  2:3814881/101‑1 (MQ=255)


                                                        tgcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTg                                                <  2:5905741/101‑1 (MQ=255)


                                                         gcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTgg                                               <  2:3995934/101‑1 (MQ=255)


                                                         gcggctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTgg                                               <  1:1826277/101‑1 (MQ=255)


                                                           cgctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGa                                             <  2:2255926/100‑1 (MQ=255)


                                                            gctCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGaa                                            <  1:664478/101‑1 (MQ=255)


                                                              tCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGaaaa                                          <  1:6969440/101‑1 (MQ=255)


                                                               cGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGaaaaa                                         <  1:5935673/101‑1 (MQ=255)


                                                                gAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAAt                                        <  2:2469948/101‑1 (MQ=255)


                                                                gAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAAt                                        <  1:2413814/101‑1 (MQ=255)


                                                                 acgAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATa                                       <  2:4571707/99‑1 (MQ=38)


                                                                 aGGAAAGCTGAAGCCGCGGAACGGGGGTCTTTCCG..CCCCTCGCTCCACCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATa                                       <  2:4181927/101‑1 (MQ=38)


                                                                 aGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATa                                       <  1:3016735/101‑1 (MQ=255)


                                                                   gAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACg                                     <  2:5228456/101‑1 (MQ=255)


                                                                   gAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACg                                     <  1:3139463/101‑1 (MQ=255)


                                                                     aaGCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGcc                                   <  2:327150/101‑1 (MQ=255)


                                                                       gCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGcccc                                 <  1:4098617/101‑1 (MQ=255)


                                                                       gCTGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGcccc                                 <  1:1833786/101‑1 (MQ=255)


                                                                         tGAAGCCGGGGACCGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTGGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCtt                               <  1:2224503/101‑1 (MQ=38)


                                                                         tGAAGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCtt                               <  2:1704999/101‑1 (MQ=255)


                                                                            atccGCCGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCttttt                            <  2:146765/99‑1 (MQ=38)


                                                                            aGCCGCGGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCttttt                            <  1:2886982/101‑1 (MQ=255)


                                                                               cgcgGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCtt                         <  1:3419778/101‑1 (MQ=255)


                                                                               cgcgGAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCtt                         <  2:4630459/101‑1 (MQ=255)


                                                                                  ggAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGc                      <  1:3964557/101‑1 (MQ=255)


                                                                                  ggAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGc                      <  2:1290221/101‑1 (MQ=255)


                                                                                   gAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCt                     <  2:6448728/101‑1 (MQ=255)


                                                                                   gAACGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCt                     <  1:6482917/101‑1 (MQ=255)


                                                                                     aCGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCa                   <  2:4044809/101‑1 (MQ=255)


                                                                                     aCGGGGGGCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCa                   <  1:1282738/101‑1 (MQ=255)


                                                                                        gggggCTTTCCGCCCCC..CGCCCCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACTCCCCTTTTTCTTGGCTCAAAt                <  1:4433703/101‑1 (MQ=38)


                                                                                        gggggCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAAt                <  2:6784128/101‑1 (MQ=255)


                                                                                        gggggCTTTCCGCCCCC..CGCACCCCCCCGGCGTATTTGCACCAAGAAAAAGCGAACGGGGTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAAt                >  2:6852610/1‑101 (MQ=38)


                                                                                         ggggCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATa               <  1:6191536/101‑1 (MQ=255)


                                                                                         ggggCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATa               <  1:2064660/101‑1 (MQ=255)


                                                                                         ggggCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATa               <  2:4780038/101‑1 (MQ=255)


                                                                                          gggCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATAc              <  2:4854477/101‑1 (MQ=255)


                                                                                           ggCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACg             >  1:5988143/1‑101 (MQ=255)


                                                                                            gCTTTCCGCCCCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGc            <  1:645788/101‑1 (MQ=255)


                                                                                                  cgccccc..cGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCtt      <  1:5330343/97‑1 (MQ=255)


                                                                                                  cgccccc..cGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCtt      <  1:2913206/97‑1 (MQ=255)


                                                                                                  cgccccc..cGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCtt      <  1:1336924/97‑1 (MQ=255)


                                                                                                   gccccc..cGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTc     <  1:809881/98‑1 (MQ=255)


                                                                                                   gccccc..cGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTc     <  2:3343115/98‑1 (MQ=255)


                                                                                                   gccccc..cGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTc     <  2:3194988/98‑1 (MQ=255)


                                                                                                   gccccc..cGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTc     <  1:5415686/98‑1 (MQ=255)


                                                                                                    ccccc..cGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTca    <  2:548774/99‑1 (MQ=255)


                                                                                                    ccccc..cGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTca    <  2:5941250/99‑1 (MQ=255)


                                                                                                    ccccc..cGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTca    <  1:5980819/99‑1 (MQ=255)


                                                                                                     cccc..cGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTcac   <  1:3844113/100‑1 (MQ=255)


                                                                                                     cccc..cCCCCCCCCCGGGCCTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACCCCCCTTTTTCTTGGCTCAAATACGCAGTCTTcac   <  1:884269/100‑1 (MQ=255)


                                                                                                      ccc..cGCACCCCCCGGGCGTATTTGCACCAAGAGAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTcaca  <  1:3608400/101‑1 (MQ=255)


                                                                                                      ccc..cGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTcaca  <  1:2731341/101‑1 (MQ=255)


                                                                                                      ccc..cGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTcaca  <  2:5334763/101‑1 (MQ=255)


                                                                                                      ccc..cGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTcaca  <  2:338889/101‑1 (MQ=255)


CGACATCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGCGGAACGGGGGGCTTTCCG..CCC..CGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGCAGTCTTCACA  >  NC_014034/235496‑235696

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG