BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1253895 =	92 (0.260)	50 (0.140)	5/198	36.8	0.25	intergenic (+53/+38)	RCAP_rcc01181/hisH	hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
*	?	NC_014034	= 2577295	209 (0.580)	50 (0.140)	5/198	36.8	0.25	intergenic (+217/‑212)	fdx/purU	ferredoxin VI/formyltetrahydrofolate deformylase
Rejected: Position hash score below cutoff.

Only 100 of 211 total aligned reads displayed.


CAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.C.GGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCACCTG  >  NC_014034/2577197‑2577395


cAGGAAAAGCCAAAGCCGTCTCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGcccc                                                                                                     <  1:4361620/101‑1 (MQ=255)


 aGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGccccc                                                                                                    >  2:2793054/1‑101 (MQ=255)


 aGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGccccc                                                                                                    >  1:2761335/1‑101 (MQ=255)


    aaaaGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCcggc                                                                                                 <  2:2968499/101‑1 (MQ=255)


    aaaaGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCcggc                                                                                                 <  2:5807730/101‑1 (MQ=255)


     aaagccaaagccGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCcggcg                                                                                                >  2:5916928/1‑101 (MQ=255)


      aagccaaagccGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCcggcgg                                                                                               >  2:4837011/1‑101 (MQ=255)


      aagccaaagccGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCcggcgg                                                                                               >  2:5020847/1‑101 (MQ=255)


        gccaaagccGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCgggg                                                                                             >  1:3352964/1‑100 (MQ=255)


         ccaaagccGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCggggg                                                                                            >  1:1042050/1‑99 (MQ=255)


         ccaaagccGCCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTc                                                                                            <  1:1565541/101‑1 (MQ=255)


           aaagccGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGc                                                                                          >  2:1250557/1‑101 (MQ=255)


           aaagccGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGc                                                                                          >  1:218907/1‑101 (MQ=255)


           aaagccGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGc                                                                                          <  2:433916/101‑1 (MQ=255)


           aaagccGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGCCGGGTCGc                                                                                          >  1:912777/1‑101 (MQ=255)


            aggccGCCCCGGGCGGGCCCG..AGGCCCCCGGGCCCCGGGCCCCCTTTTATCTTGCCCAAAATATCCCGGGGGTCGG.GGGG.CGGAGCCCCCGGCGGGTCGcc                                                                                         <  1:5937723/99‑1 (MQ=9)


                  tCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCg                                                                                   <  2:6741609/101‑1 (MQ=255)


                     ccGGCCGGGCCGAAAGGCCCCAGGACCCGGGG.CCCCTTTTACTTTGCCAAAATTTTCCCGGGGGCC.C.GGGGCCGGAGCCCCCGGCGGGCCGCCGGGGGGaa                                                                                 >  2:2658349/1‑101 (MQ=16)


                          aGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCcgcg                                                                           >  1:2807424/1‑101 (MQ=255)


                          aGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGGCGCCGGGGCGAAGCcgcg                                                                           >  2:4733365/1‑101 (MQ=255)


                            gACCG.AAGGCCTCAGGCCCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCgcggc                                                                         <  2:6568577/101‑1 (MQ=255)


                             aCCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCgcggcg                                                                        >  1:2625848/1‑101 (MQ=255)


                               cG.AAGGCCTCAGGACCCGGGG.CCCTTTTTATCTTGCCCAAAATACCCCGGGGGTCGG.GGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGaa                                                                      <  2:1572234/101‑1 (MQ=21)


                               cG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGGCGCCGGGGCGAAGCCGCGGCGaa                                                                      >  1:5419647/1‑101 (MQ=255)


                                g.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGaaa                                                                     >  1:1749319/1‑101 (MQ=255)


                                g.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CAGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGaaa                                                                     >  1:5526250/1‑101 (MQ=255)


                                  aaGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAAt                                                                    >  1:3740689/1‑101 (MQ=255)


                                  aaGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGCCGGGTCGCCGGGGCGAAGCCGCGGAGCAAt                                                                    >  2:5094332/1‑101 (MQ=25)


                                       cTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGCAATcccgg                                                               >  2:4638060/1‑101 (MQ=255)


                                           ggACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccgggccc                                                           >  1:2672533/1‑101 (MQ=255)


                                           ggACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggcccc                                                           >  2:543962/1‑101 (MQ=255)


                                             aCCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggccccgg                                                         >  1:5487893/1‑101 (MQ=255)


                                              ccccGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggccccggc                                                        >  1:5674131/1‑101 (MQ=255)


                                                ccGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCaa                                                      >  1:3827381/1‑101 (MQ=255)


                                                ccGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCaa                                                      >  2:5281338/1‑101 (MQ=255)


                                                   gg.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAgcg                                                   <  2:1042015/101‑1 (MQ=255)


                                                    g.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGGCGGCGGGGGGAAGCCGCGGCGAAATCCCGGCCCCGGCCAgcag                                                  >  1:1928515/1‑99 (MQ=21)


                                                       cccTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGGAGCGGCCGGGAAATCCCGGCCCCGGCAAGCGccg                                                >  1:3854437/1‑100 (MQ=21)


                                                       cccTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGACGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCt                                                <  1:5021100/101‑1 (MQ=255)


                                                        ccTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTg                                               >  2:3853981/1‑101 (MQ=255)


                                                        ccTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTg                                               <  1:6904207/101‑1 (MQ=255)


                                                        ccTTTTATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGGCGCCCGGGCGGAGCCCCGGCGACACCCCGGCCCCGGCCAGGGcccg                                               >  2:20533/1‑99 (MQ=17)


                                                          ttttATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTggg                                             <  1:2833657/101‑1 (MQ=255)


                                                           tttATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGCAGCCGCGGCGCAATCCCCGCCCCGGCAAGCGCCTGGGc                                            >  2:5725435/1‑101 (MQ=18)


                                                           tttATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCCAGCGCCTGGGc                                            >  1:2349449/1‑101 (MQ=255)


                                                           tttATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGc                                            >  2:3082909/1‑101 (MQ=255)


                                                           tttATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGc                                            >  2:4453681/1‑101 (MQ=255)


                                                           tttATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGc                                            >  1:172522/1‑101 (MQ=255)


                                                            ttATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGGCCCGGCAAGCGCCGGGGCg                                           >  2:5705218/1‑101 (MQ=21)


                                                            ttATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCg                                           >  2:3941629/1‑101 (MQ=255)


                                                             tATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCgg                                          >  2:1364085/1‑101 (MQ=255)


                                                             tATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCgg                                          >  1:3666642/1‑101 (MQ=255)


                                                             tATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCgg                                          >  1:830002/1‑101 (MQ=255)


                                                             tATCTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGGCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCgg                                          >  1:6515942/1‑101 (MQ=255)


                                                                cTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGGGGGaa                                       >  2:5183739/1‑101 (MQ=255)


                                                                cTTGCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGaa                                       >  2:5980032/1‑101 (MQ=255)


                                                                   gCCCAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGAt                                    >  1:1290054/1‑101 (MQ=255)


                                                                     ccAAAATATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcg                                  >  2:6978998/1‑101 (MQ=255)


                                                                         aaTATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcgcgcg                              >  1:4649705/1‑101 (MQ=255)


                                                                         aaTATCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcgcgcg                              >  2:2641197/1‑101 (MQ=255)


                                                                           tatCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGGGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGcc                            >  1:4145551/1‑101 (MQ=255)


                                                                           tatCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGcc                            >  2:5852207/1‑101 (MQ=255)


                                                                            atCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGccc                           >  1:1131567/1‑101 (MQ=255)


                                                                            atCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGccc                           <  2:3740539/101‑1 (MQ=255)


                                                                            atCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGccc                           >  1:6147896/1‑101 (MQ=255)


                                                                             tCCCGGGGGTCGG.GGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGcccc                          <  1:2520054/101‑1 (MQ=255)


                                                                             tCCCGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGcccc                          >  1:2741085/1‑101 (MQ=255)


                                                                              cccGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCg                         >  2:6105552/1‑101 (MQ=255)


                                                                              cccGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCg                         >  2:350403/1‑101 (MQ=255)


                                                                              cccGGGGGTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCg                         >  2:5684095/1‑101 (MQ=255)


                                                                                 gggggTC.CGGGGG.CGGAGCCCCCGGCGGGGCGCCGGGGCGAAGCCGCGGCGGAATCCCGGCCCCGGCCAGAGCCTCGGCGCGAAGATCccgcgcgcgcgac                      >  2:1217216/1‑94 (MQ=18)


                                                                                  ggggTC.CGGGGG.CGGAGCCCCCGGCGGGGCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGc                     >  2:2589618/1‑101 (MQ=255)


                                                                                   gggcccgggggg.CGGCCCCCCGGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGc                     <  1:4885852/93‑1 (MQ=37)


                                                                                   gggTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCa                    >  2:4176070/1‑101 (MQ=255)


                                                                                    ggTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCaa                   >  1:4015133/1‑101 (MQ=255)


                                                                                    ggTC.CGGGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCaa                   >  1:6720303/1‑101 (MQ=255)


                                                                                      gtccggggg.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAAt                  <  1:3118787/96‑1 (MQ=255)


                                                                                       tccggggg.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAAtt                 <  1:2908813/97‑1 (MQ=255)


                                                                                       gccggggg.CCGACCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAAtt                 <  2:6949651/97‑1 (MQ=255)


                                                                                        cgggggg.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTg                <  2:4923486/98‑1 (MQ=255)


                                                                                        ccggggg.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTg                >  2:664542/4‑101 (MQ=255)


                                                                                        ccggggg.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGAAATTg                >  1:3197620/4‑101 (MQ=255)


                                                                                         cggggg.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGc               <  1:4709246/99‑1 (MQ=255)


                                                                                          ggggg.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCg              >  2:7083098/2‑101 (MQ=255)


                                                                                          ggggg.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCg              >  2:6627675/2‑101 (MQ=255)


                                                                                           gggg.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGa             >  1:6304516/1‑101 (MQ=255)


                                                                                           gggg.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGa             >  1:348235/1‑101 (MQ=255)


                                                                                           gggg.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGa             >  1:7114966/1‑101 (MQ=255)


                                                                                           gggg.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGa             >  2:2462582/1‑101 (MQ=255)


                                                                                            ggg.CGGGGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGac            <  1:5281604/101‑1 (MQ=255)


                                                                                            ggg.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGac            >  2:3602084/1‑101 (MQ=255)


                                                                                            ggg.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGac            >  2:3168287/1‑101 (MQ=255)


                                                                                                cGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACg         >  2:114384/1‑101 (MQ=255)


                                                                                                cGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACg         >  2:190196/1‑101 (MQ=255)


                                                                                                 ggAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGc        >  2:2418643/1‑101 (MQ=255)


                                                                                                 ggAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGc        >  2:274377/1‑101 (MQ=255)


                                                                                                  gAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGcc       <  2:5525960/101‑1 (MQ=255)


                                                                                                     cccccGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCAcc    <  2:3221060/101‑1 (MQ=255)


                                                                                                      ccccGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCACCt   <  2:4783953/101‑1 (MQ=255)


                                                                                                       cccGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCACCTg  <  2:2321922/101‑1 (MQ=255)


CAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCG.AAGGCCTCAGGACCCCGGG.CCCCTTTTATCTTGCCCAAAATATCCCGGGGGTC.C.GGGG.CGGAGCCCCCGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCACCTG  >  NC_014034/2577197‑2577395

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 22 ≤


ATCG

< 31 ≤


ATCG

< 40 ≤


ATCG