New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1303934 =171 (0.500)90 (0.260) 24/190 23.8 0.27 intergenic (+121/+36) urtE/RCAP_rcc01231 urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
?NC_014034 2566542 = 305 (0.850)intergenic (+14/+180) purD/sdaA phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase
Rejected: Position hash score below cutoff.

Only 100 of 313 total aligned reads displayed.

CAGCGCGCCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGGGG.CGCTGCCCCCCTCCT..G..CTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGC  >  NC_014034/2566448‑2566643
                                                                                                |                                                                                                         
cAGCGCGCCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGGGACGAAAC.CGGGg.cgggggg                                                                                                     >  2:6243646/1‑96 (MQ=255)
   cgcgcCTATGCGGGGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGcccc                                                                                                   <  1:4101395/101‑1 (MQ=255)
   cgcgcCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTTcccc                                                                                                   <  2:2563068/101‑1 (MQ=255)
        cTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGcccccccct                                                                                              >  2:6861942/1‑98 (MQ=255)
        cTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCcctct                                                                                              <  2:2443510/101‑2 (MQ=255)
          tggCGGTGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGGGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..g                                                                                          <  1:3691558/99‑1 (MQ=255)
          aTGCGATGGCCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..g                                                                                          <  1:6537275/101‑1 (MQ=255)
           tGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..gg                                                                                         <  2:2010294/101‑2 (MQ=255)
            gCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..ggc                                                                                        <  1:1294639/101‑3 (MQ=255)
              gATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..ggcct                                                                                      <  2:744056/101‑5 (MQ=39)
              gATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..ggcct                                                                                      <  2:6474863/101‑5 (MQ=39)
              gATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCGGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..ggcct                                                                                      <  1:2529884/101‑5 (MQ=38)
                tGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..ggccttc                                                                                    <  2:3970458/101‑7 (MQ=38)
                   gcGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..ggccttcggc                                                                                 <  1:2784000/100‑10 (MQ=37)
                        gCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAAtt                                                                            <  2:5969204/101‑1 (MQ=37)
                         cGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTc                                                                           <  2:4712272/101‑1 (MQ=37)
                         cGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTc                                                                           <  2:3698131/101‑1 (MQ=37)
                          gATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCa                                                                          <  2:2734722/101‑1 (MQ=37)
                           aTCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCCATTCAc                                                                         >  2:2997201/1‑101 (MQ=37)
                            tCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCAcc                                                                        <  2:4097155/101‑1 (MQ=37)
                               ccTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCAccccc                                                                     <  1:2881739/100‑1 (MQ=25)
                                cTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCAcccccc                                                                    <  2:127103/101‑1 (MQ=25)
                                     ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTG..GGCCTTCGGCCAATTCACCCCCCGGGat                                                               <  2:4330737/101‑1 (MQ=25)
                                     ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCCCTT..GGCCTTCGGCCAATTCACCCCCCCGGat                                                               >  2:7002147/1‑101 (MQ=25)
                                      cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGata                                                              <  1:4854046/101‑1 (MQ=25)
                                      cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCACCGGGata                                                              <  1:144504/101‑1 (MQ=25)
                                       gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGatat                                                             <  2:2957829/101‑1 (MQ=25)
                                        aGGGGTTCTGCCGCCGCGACATCGGCTGGCGGGCGCCCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGGCCATTCACCCCCCGGGAGAtt                                                            >  2:4468366/1‑101 (MQ=21)
                                          gggTTGTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTc                                                          <  1:5731627/101‑1 (MQ=21)
                                          gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTTTGG..CCTCGGCCAATTCACCCCCCCGGATCTTTc                                                          >  2:1133395/1‑101 (MQ=25)
                                           ggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCg                                                         <  1:6697804/101‑1 (MQ=21)
                                               cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCa                                                     <  2:3394892/101‑1 (MQ=21)
                                                 gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAg                                                   <  1:5214826/101‑1 (MQ=21)
                                                  ccgccgCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGa                                                  <  1:4523288/101‑1 (MQ=21)
                                                   cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGAt                                                 <  2:5073261/101‑1 (MQ=21)
                                                    gccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATa                                                <  1:5047668/101‑1 (MQ=21)
                                                    gccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATa                                                <  2:606707/101‑1 (MQ=21)
                                                     ccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCGAGATaa                                               <  1:4445201/101‑1 (MQ=21)
                                                     ccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATaa                                               <  1:887977/101‑1 (MQ=21)
                                                     ccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATaa                                               <  2:5601198/101‑1 (MQ=21)
                                                     ccacgACATCGGCTGGGGCACGCTCTGAGACGAAAC.GGGGGACGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATaa                                               <  2:7078549/98‑1 (MQ=18)
                                                      cgcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGTGATATTTCGGGCAAGATaaa                                              <  1:6385428/101‑1 (MQ=21)
                                                       gcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaag                                             <  1:303436/101‑1 (MQ=21)
                                                       gcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaag                                             <  1:5355032/101‑1 (MQ=21)
                                                        cgACCTCGGCTCGCGCGCCCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaaga                                            <  1:2272176/101‑1 (MQ=18)
                                                        cgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.GGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaaga                                            >  1:1653626/1‑101 (MQ=21)
                                                        cgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaaga                                            <  1:6243965/101‑1 (MQ=21)
                                                        cgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaaga                                            <  2:4925789/101‑1 (MQ=21)
                                                          aCATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCGAGATAaagaag                                          <  2:317249/101‑1 (MQ=21)
                                                          aCATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaagaag                                          <  2:1003257/101‑1 (MQ=21)
                                                            aTCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGt                                        <  1:195178/101‑1 (MQ=21)
                                                              cGGCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCt                                      <  1:75760/101‑1 (MQ=21)
                                                               ggCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt                                     <  2:1449346/101‑1 (MQ=21)
                                                               ggCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAAATAAAGAAGGTCtt                                     >  1:3659943/1‑101 (MQ=21)
                                                                gCTGGCGCGCGCTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCttt                                    >  1:1794528/1‑101 (MQ=21)
                                                                  tGGCGCGCGCTCTGAGACGAAACGGGGGG.CGGTGCCCCCCTCTT..GGCCTTCGGGCAATTCACCCCCCGGGAAATTTCGGCGAAGATAAAGAAGGCCTTTTc                                  >  1:6946152/1‑101 (MQ=18)
                                                                    gcgcgcgcTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCt                                >  2:2787478/1‑101 (MQ=21)
                                                                     ggcgcgcTCTGAGACGAGACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt                               <  2:783887/100‑1 (MQ=21)
                                                                     cgcgcgcTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt                               <  2:5420300/101‑1 (MQ=21)
                                                                      gcgcgcTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt                              <  2:3488378/101‑1 (MQ=21)
                                                                      gcgcgcTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt                              <  1:2170609/101‑1 (MQ=21)
                                                                       cgcgcTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc                             <  2:2496957/101‑1 (MQ=21)
                                                                       cgcgcTCTGAGACGAAACGGGGGG.CGCTGCCACCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc                             <  1:5124245/101‑1 (MQ=21)
                                                                        gcgcTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCa                            <  2:1201737/101‑1 (MQ=21)
                                                                         cgcTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCAt                           >  2:5261229/1‑101 (MQ=21)
                                                                         cgcTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCAt                           <  1:3411622/101‑1 (MQ=21)
                                                                         cgcTCTGAGACGAAAC.GGGGGTCGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCAt                           <  2:3639101/101‑1 (MQ=25)
                                                                          gcTCTGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc                          >  1:7070547/1‑101 (MQ=21)
                                                                           ctctGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCt                         <  2:2333179/101‑1 (MQ=21)
                                                                           ctctGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCt                         <  1:1014956/101‑1 (MQ=21)
                                                                             ctGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTg                       <  1:3082905/101‑1 (MQ=21)
                                                                              tGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGc                      <  1:2592644/101‑1 (MQ=21)
                                                                              tGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGc                      >  1:1102326/1‑101 (MQ=21)
                                                                              tGAGACGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGc                      <  2:7017151/101‑1 (MQ=21)
                                                                               gagaCGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGcc                     <  2:2858374/101‑1 (MQ=21)
                                                                                agaCGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGccc                    <  1:3989405/101‑1 (MQ=21)
                                                                                agaCGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGccc                    <  2:3224992/101‑1 (MQ=21)
                                                                                  aCGAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATAATTTCGGCAAGATAAAGAAGGGCTTTTTCCTTCACCTTTCCCgc                  >  1:2427410/1‑100 (MQ=9)
                                                                                    gcaacgggggg.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa                >  1:4254744/7‑101 (MQ=21)
                                                                                    gAAACGGGGGG.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa                >  1:1903948/1‑101 (MQ=21)
                                                                                    gAAACGGGGGG.CGCGGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGGCTTTTCCTTTCATCTTGCCCGaaa                <  2:1775307/101‑1 (MQ=21)
                                                                                     aaacgggggg.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAat               <  2:6759488/96‑1 (MQ=21)
                                                                                     aaacgggggg.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAat               >  1:5450484/6‑101 (MQ=21)
                                                                                     aaacgggggg.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAat               >  1:6475801/6‑101 (MQ=21)
                                                                                      ggcaggggg.CGCTG.CCCCCTCTT..GGCCTTTGGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgg        >  2:1872811/5‑101 (MQ=0)
                                                                                      aacgggggg.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata              >  2:6107955/5‑101 (MQ=25)
                                                                                         gggggg.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc           <  1:5317831/100‑1 (MQ=25)
                                                                                         gggggg.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc           >  2:3876808/2‑101 (MQ=25)
                                                                                         gggggg.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc           <  1:5920528/100‑1 (MQ=25)
                                                                                         gggggg.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc           <  2:1333280/100‑1 (MQ=25)
                                                                                         aggggg.CGCTG.CCCCCTCTT..GGCCTTTGGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg     >  1:3838067/2‑101 (MQ=0)
                                                                                         aggggg.CGCTG.CCCCCTCTT..GGCCTTTGGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg     >  1:5424946/2‑101 (MQ=0)
                                                                                         aggggg.CGCTG.CCCCCTCTT..GGCCTTTGGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg     >  2:2225081/2‑101 (MQ=0)
                                                                                            ggg.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCgg        >  1:3920487/1‑101 (MQ=25)
                                                                                            ggg.CGCTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCgg        <  1:2044925/101‑1 (MQ=37)
                                                                                            ggg.CGCTG.CCCCCTCTT..GGCCTTTGGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggag  >  1:4688077/1‑98 (MQ=2)
                                                                                                cgcTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCggggg     >  2:5748936/1‑101 (MQ=37)
                                                                                                cgcTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCggggg     <  2:6560627/101‑1 (MQ=37)
                                                                                                cgcTGCCCCCCTCTT..GGCCTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCggggg     >  2:2631240/1‑101 (MQ=37)
                                                                                                cgcTGCCCCCCTCTT..GGCCTCCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCgcggg     <  1:5614949/101‑1 (MQ=25)
                                                                                                |                                                                                                         
CAGCGCGCCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGGGG.CGCTGCCCCCCTCCT..G..CTTCGGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGC  >  NC_014034/2566448‑2566643

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG