BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2330175	65 (0.180)	21 (0.060)	3/198	38.8	0.12	intergenic (+150/+162)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
*	?	NC_014034	2577165 =	247 (0.690)	21 (0.060)	3/198	38.8	0.12	intergenic (+87/‑342)	fdx/purU	ferredoxin VI/formyltetrahydrofolate deformylase
Rejected: Position hash score below cutoff.

Only 100 of 253 total aligned reads displayed.


AAAAGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.G..C.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTAT  >  NC_014034/2577065‑2577258


aaaaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..ggg                                                                                                     >  2:3866123/1‑101 (MQ=255)


 aaaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..ggg.g                                                                                                   >  2:203580/1‑101 (MQ=255)


 aaaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..ggg.g                                                                                                   <  2:4406013/101‑1 (MQ=255)


  aaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..ggg.g.g                                                                                                 >  2:2908704/1‑101 (MQ=255)


   aGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..ggg.g.gg                                                                                                >  2:1930184/1‑100 (MQ=255)


    gCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.g..ct                                                                                             <  1:3402522/101‑2 (MQ=255)


     cAGATCTGACATCGCTATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..ggg.g.gggg                                                                                              >  1:3874369/1‑98 (MQ=255)


     cAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..tgg.g.gggg                                                                                              >  2:4030754/1‑98 (MQ=255)


      aGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..cggcggggg                                                                                               >  2:2550652/1‑95 (MQ=255)


       gATCTGACATCGCCATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.g..ctccg                                                                                          <  1:6661657/101‑5 (MQ=255)


        aTCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.g..ctccgc                                                                                         <  1:4022435/101‑6 (MQ=255)


          cTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.g..ctccgccc                                                                                       <  1:1390615/101‑8 (MQ=255)


          cTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.g..ctccgccc                                                                                       <  2:2093113/101‑8 (MQ=255)


           tGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..ggg.g.ggggtgcccc                                                                                        >  2:5657513/1‑92 (MQ=255)


            gACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.g..ctccgccccc                                                                                     <  2:3055772/101‑10 (MQ=255)


            gACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.g..ctccgccccc                                                                                     <  1:1653818/101‑10 (MQ=255)


             aCATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGCGGGGG.G.G..C.CGc.ccccc                                                                                    >  1:5144406/1‑100 (MQ=255)


             aCATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.G..G.GGc.ccccccc                                                                                  >  1:4304149/1‑98 (MQ=255)


                tCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCAc                                                                                 <  1:6741878/101‑1 (MQ=255)


                 cgcgATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCAcc                                                                                >  1:4634686/1‑101 (MQ=255)


                   cgATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.G..G.GGG.CCCCCCCcccccc                                                                            >  1:6502830/1‑100 (MQ=255)


                    gATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCAccccc                                                                             <  2:842416/101‑1 (MQ=255)


                     aTGGAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.G..G.GGC.GCCCCCCcccccccc                                                                          >  1:5615891/1‑98 (MQ=37)


                     aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCg                                                                            <  1:3226075/101‑1 (MQ=255)


                     aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCg                                                                            <  1:117542/101‑1 (MQ=255)


                       gAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGc                                                                          <  1:3899709/101‑1 (MQ=255)


                       gAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGc                                                                          <  2:1052210/101‑1 (MQ=255)


                       gAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.G..G.GGG.CCCCCCCcccccccccc                                                                        >  2:6167761/1‑96 (MQ=38)


                        aaaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGCGGGGG.G.G..G.CGC.CCCCGCCCCCCCCGCg                                                                         >  1:2968608/1‑101 (MQ=38)


                        aaaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGCGGGGG.G.G..C.CGC.GCCCCCAccccccccg                                                                         >  2:4361398/1‑97 (MQ=37)


                             gccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTAttt                                                                    <  2:1745105/101‑1 (MQ=255)


                             gccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTAttt                                                                    <  1:4564446/101‑1 (MQ=255)


                              ccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTg                                                                   <  1:3786278/101‑1 (MQ=255)


                               cgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGc                                                                  <  1:1199369/101‑1 (MQ=255)


                               cgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGc                                                                  <  2:211885/101‑1 (MQ=255)


                                  cTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCAcc                                                               <  2:3591672/101‑1 (MQ=255)


                                  cTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCAcc                                                               <  1:2787596/101‑1 (MQ=255)


                                   ttCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCa                                                              <  1:203583/101‑1 (MQ=255)


                                   ttCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCa                                                              <  1:2079328/101‑1 (MQ=255)


                                    tCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GGCC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAg                                                             >  1:471145/1‑101 (MQ=255)


                                    tCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAg                                                             <  1:1440240/101‑1 (MQ=255)


                                    tCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAg                                                             <  2:3331298/101‑1 (MQ=255)


                                    tCGGGCGGCCTTTTGCCAGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAg                                                             <  1:870397/101‑1 (MQ=37)


                                      gggCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CCC.CCCCGCAACCCCCGCGTATTTggaaccgga                                                           >  2:282338/1‑93 (MQ=25)


                                        gcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGaaa                                                         <  2:2922442/101‑1 (MQ=255)


                                        gcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGaaa                                                         <  2:5774479/101‑1 (MQ=255)


                                             cTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAaaagcca                                                    <  2:5211474/101‑1 (MQ=255)


                                               tttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAaaagccaaa                                                  >  2:4854916/1‑101 (MQ=255)


                                               tttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAaaagccaaa                                                  <  1:3170766/101‑1 (MQ=255)


                                               tttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAaaagccaaa                                                  <  2:5297133/101‑1 (MQ=255)


                                               tttGACTGCGCGCCAAAGCCTTTCCCCTTGTCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CCC.CCCCGCCCCCCCGGCGTATTTGCACCAGGAaaagccaaa                                                  <  1:3337358/101‑1 (MQ=21)


                                               ttggCCTGGGCGCGAAAGCGTTTCGCCTTGGCTCCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAaaagccaaa                                                  <  2:3120638/98‑1 (MQ=25)


                                                 tGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGGATTTGCCCCAGGAaaagccaaagc                                                >  1:2328523/1‑101 (MQ=37)


                                                   ccTGGCCGCGATAGCGTTTCGCCTTGGCTTCGCAAAGGCGTCCCGGC..GGGTGCG..C.CGC.CCCCGCACTCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCg                                              <  2:4674472/101‑1 (MQ=37)


                                                    cTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGGCCCAGGAAAAGCCAAAGCCgc                                             >  2:6947876/1‑100 (MQ=25)


                                                    cTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGt                                             <  2:903044/101‑1 (MQ=255)


                                                     tGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTc                                            <  1:5796852/101‑1 (MQ=255)


                                                      gggCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTcc                                           <  1:4496119/101‑1 (MQ=255)


                                                      gggCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGCcc                                           >  2:5550121/1‑101 (MQ=37)


                                                       ggCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTccc                                          <  1:678703/101‑1 (MQ=255)


                                                        gcgcGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTcccc                                         <  2:5111558/101‑1 (MQ=255)


                                                        gcgcGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTcccc                                         <  1:6547093/101‑1 (MQ=255)


                                                          gcgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCgg                                       <  2:5907932/101‑1 (MQ=255)


                                                          gcgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCCGCGGATTTGCACCAGGAAAAGACAAAGCCGTCCCCgg                                       >  1:4784193/1‑101 (MQ=37)


                                                            gAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCa                                     >  1:5086438/1‑101 (MQ=255)


                                                              aaGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAgg                                   <  2:6467043/101‑1 (MQ=255)


                                                              aaGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAgg                                   <  1:1930256/101‑1 (MQ=255)


                                                              aaGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATCTGCACCAGGGAAAGCCAAAGCCGGCCCCGGCAgg                                   >  2:4585392/1‑101 (MQ=25)


                                                                gCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGAc                                 <  1:5936676/101‑1 (MQ=255)


                                                                 cGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGAcc                                <  2:6733500/101‑1 (MQ=255)


                                                                  gTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCg                               <  2:3483974/101‑1 (MQ=255)


                                                                  gTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCg                               <  1:6606611/101‑1 (MQ=255)


                                                                   tttCGCCTTGGCTTCACCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGa                              <  2:4961403/101‑1 (MQ=37)


                                                                    ttCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGaa                             <  1:2550746/101‑1 (MQ=255)


                                                                     tCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAg                            <  2:573724/101‑1 (MQ=255)


                                                                     tCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAg                            <  2:2592183/101‑1 (MQ=255)


                                                                     tCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAg                            <  2:6060510/101‑1 (MQ=255)


                                                                      cGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGACAAGCCAAAGCCGTCCCACGCAGGACCggcgg                           >  2:3960671/1‑97 (MQ=25)


                                                                          ttGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                       <  1:3242040/101‑1 (MQ=255)


                                                                           tGGCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCa                      <  1:1856985/101‑1 (MQ=255)


                                                                            ggCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAg                     <  2:168683/101‑1 (MQ=255)


                                                                            ggCTTCGCCAAGGCGACCCGGC..AGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCCGCAGGACCGCAGGCCTccg                     >  1:2922326/1‑99 (MQ=37)


                                                                             gCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAgg                    <  1:5852719/101‑1 (MQ=255)


                                                                             gCTTCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAgg                    >  1:4124229/1‑101 (MQ=255)


                                                                                tCGCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcc                 <  2:4303927/101‑1 (MQ=255)


                                                                                  gCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcccc               <  1:4731624/101‑1 (MQ=255)


                                                                                  gCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcccc               >  1:6025750/1‑101 (MQ=255)


                                                                                  gCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcccc               >  1:1074568/1‑101 (MQ=255)


                                                                                  gCCAAGGCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcccc               <  1:3776409/101‑1 (MQ=255)


                                                                                        gCGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGccc         <  1:6141085/101‑1 (MQ=255)


                                                                                         cGACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGcccc        <  1:5312744/101‑1 (MQ=255)


                                                                                          gACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCt       <  2:4717644/101‑1 (MQ=255)


                                                                                          gACCCGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCt       >  2:1391652/1‑101 (MQ=255)


                                                                                          gACCCGGC..GGG.G.GCTC.CGC.CCCCCCACCCCCGGCGGATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGGAGGCCTCAGGACCCCGGGCCCCt       >  2:3850701/1‑101 (MQ=37)


                                                                                           gcccGGC..GGG.G.G..CTCCCGCCCCGCCCCCCCGGCGTATTTGCCCCAGGAAAAGCCAAAGGCGTCCCCGGCAGGGCCCAAGGGCTCAGGGCCCCGGGCCCCtt      <  2:1492634/100‑1 (MQ=255)


                                                                                             ccGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCtttt    <  2:248728/101‑1 (MQ=255)


                                                                                             ccGGC..GGG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCtttt    <  2:6638081/101‑1 (MQ=255)


                                                                                              cggc..ggG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTa   <  1:7054628/101‑1 (MQ=255)


                                                                                              cggc..ggG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTa   <  1:5376077/101‑1 (MQ=255)


                                                                                               ggc..ggG.G.GCTC.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTAt  <  1:1001615/101‑1 (MQ=255)


AAAAGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGG.G.G..C.CGC.CCCCGCACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTAT  >  NC_014034/2577065‑2577258

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 28 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG