BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	392448 =	154 (0.450)	55 (0.160)	17/190	27.4	0.32	intergenic (‑96/+47)	RCAP_rcc00363/trmD	hypothetical protein/tRNA (guanine‑N1)‑methyltransferase
*	?	NC_014034	2330184 =	75 (0.210)	55 (0.160)	17/190	27.4	0.32	intergenic (+159/+153)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

Only 100 of 109 total aligned reads displayed.


GCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......CGG.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGG  >  NC_014034/2330098‑2330284


gcAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......GGG.......G.CGCCCCccccccccccccc                                                                                        >  1:3757946/1‑93 (MQ=37)


             gagCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGcc                                                                                  <  2:6435403/101‑1 (MQ=18)


             gagCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGcc                                                                                  <  1:5200623/101‑1 (MQ=18)


             gagCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGGATTTGCGcc                                                                                  >  2:6868732/1‑101 (MQ=18)


              agCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCa                                                                                 <  2:4797578/101‑1 (MQ=18)


                cgccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAg                                                                               <  1:1095973/101‑1 (MQ=18)


                cgccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAg                                                                               <  1:6421514/101‑1 (MQ=18)


                cgccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAg                                                                               <  1:2860038/101‑1 (MQ=18)


                 gccgcGCGGATCGGCCGATGGCGGAGAGTAATTTCGCCGCGCAGGCGCGGCGACCCGGTC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGa                                                                              <  2:3397096/101‑1 (MQ=9)


                 gccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGa                                                                              <  2:5152467/101‑1 (MQ=18)


                 gccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGa                                                                              <  2:1123883/101‑1 (MQ=18)


                 gccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTGGCGCCAAGa                                                                              >  1:3081317/1‑101 (MQ=18)


                 cccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGa                                                                              <  2:6776246/100‑1 (MQ=18)


                  ccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGaa                                                                             >  2:6725769/1‑101 (MQ=18)


                  ccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGaa                                                                             <  2:6570006/101‑1 (MQ=18)


                   cgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGaaa                                                                            <  1:4275050/101‑1 (MQ=18)


                   cgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGaaa                                                                            >  1:403950/1‑101 (MQ=18)


                   cgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGaaa                                                                            <  1:2943822/101‑1 (MQ=18)


                   cgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGaaa                                                                            <  1:2856323/101‑1 (MQ=18)


                   cgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGGATTTGCGCCAAGaaa                                                                            >  2:3257390/1‑101 (MQ=18)


                    gcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGaaaa                                                                           <  1:848701/101‑1 (MQ=18)


                    gcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGaaaa                                                                           <  2:4957290/101‑1 (MQ=18)


                    gcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGaaaa                                                                           <  2:4150104/101‑1 (MQ=18)


                       cGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGc                                                                        <  2:1433623/101‑1 (MQ=18)


                       cGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGCATTTGCGCCAAGAAAAAGc                                                                        >  1:2685712/1‑101 (MQ=17)


                        ggATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGcc                                                                       >  1:710528/1‑101 (MQ=17)


                         gATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCg                                                                      <  2:2910530/101‑1 (MQ=18)


                          aTCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCgg                                                                     <  1:1312536/101‑1 (MQ=18)


                           tCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCggg                                                                    <  1:6271252/101‑1 (MQ=18)


                              gCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgcg                                                                 <  1:1350339/101‑1 (MQ=17)


                               ccGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......GGGGCTCCCCC.CCCGCCCCCCCGGCGGATTTGCGCCAAGAAAAAACCCGGgcgc                                                                >  2:6912677/1‑101 (MQ=16)


                                 gATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgcgcgc                                                              <  1:3217558/101‑1 (MQ=17)


                                 gATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCCCACCCCCCGCGCATTTTCGCCCAGAAAAAACCGGGgcgcgc                                                              >  2:2011358/1‑101 (MQ=9)


                                  aTGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCa                                                             >  1:3472288/1‑101 (MQ=17)


                                   tGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCAt                                                            <  2:3130997/101‑1 (MQ=17)


                                   tGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCT.CCG.......CGCCCGCACCCCCGGCGTCTTTGCGCCAAGAAAAAGCCGGGGCGCGCAt                                                            >  1:7114724/1‑101 (MQ=16)


                                      cGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCGCCGC.......C.CCCCCCCCCCCGGCGGATTTGCGCCCAGAAAAAAACGGGGGGCGCATGCg                                                         >  1:5328718/1‑101 (MQ=9)


                                      cGGAGAGGAATCTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCg                                                         <  1:4088172/101‑1 (MQ=17)


                                       ggAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGCGGGGG.......CGGCGC....C.CCCGCACCCCCCGCGCATTTGCGGCAAGAAAAAGCCGGGGGGCCCATGCgg                                                        >  1:4588170/1‑101 (MQ=16)


                                       ggAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCgg                                                        >  2:1453252/1‑101 (MQ=17)


                                        gagaGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGGGCCGC.......C.CCCCCCCCCCCCCCGCATTTGCGGCCAGAAAAAACCGGGGCGCGCCTGCggg                                                       >  1:1017519/1‑101 (MQ=9)


                                           agGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGcc                                                    <  1:4266993/101‑1 (MQ=17)


                                            ggAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......CGGGCTCCCCC.CCCGCACCCCCCCCGCACTTTCGCCCAGCAAAAGCCGGGGGGCGCCAGCGGGGccc                                                   >  1:570590/1‑101 (MQ=9)


                                             gAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGGGCCGC.......C.CCCCCACCCCCCGCGGATTTTCGCCCAGAAAAAAACCGGGCGCGCATGCggggggcc                                                  >  2:2405363/1‑97 (MQ=9)


                                             gAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGcccc                                                  <  1:1199662/101‑1 (MQ=17)


                                             gAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGcccc                                                  <  2:4587931/101‑1 (MQ=17)


                                             gAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGcccc                                                  <  1:2163672/101‑1 (MQ=17)


                                             gAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGcccc                                                  <  1:2354857/101‑1 (MQ=17)


                                              aaTTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCg                                                 <  2:1212021/101‑1 (MQ=17)


                                                tttCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCACGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGa                                               >  1:488416/1‑101 (MQ=17)


                                                 ttCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGAt                                              <  2:5138646/101‑1 (MQ=18)


                                                  tCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATc                                             <  2:4758247/101‑1 (MQ=18)


                                                   cgccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCa                                            <  2:2300350/101‑1 (MQ=18)


                                                   cgccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCa                                            <  2:4489916/101‑1 (MQ=18)


                                                     ccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCAcc                                          >  1:2991479/1‑101 (MQ=18)


                                                     ccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCAcc                                          <  2:1017484/101‑1 (MQ=18)


                                                     ccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCAcc                                          <  2:4708265/101‑1 (MQ=18)


                                                     ccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCAcc                                          <  2:4634479/101‑1 (MQ=18)


                                                     ccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCAcc                                          <  1:584221/101‑1 (MQ=18)


                                                      cgcgCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACcg                                         <  1:6910732/101‑1 (MQ=18)


                                                      cgcgCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACcg                                         <  2:1320046/101‑1 (MQ=18)


                                                                                         ggggctccgcc.cccGCGCCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTgg                 <  1:723002/91‑1 (MQ=37)


                                                                                         ggggctccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTgg                 >  2:1465193/11‑101 (MQ=255)


                                                                                           ggctccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTgggg               >  1:2633850/9‑101 (MQ=255)


                                                                                            gctccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGc              >  2:6986451/8‑101 (MQ=255)


                                                                                            gctccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGc              <  1:6913031/94‑1 (MQ=255)


                                                                                            gctccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGc              >  2:497259/8‑101 (MQ=255)


                                                                                            gctccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCCTTCACCTGGGGc              >  1:2311046/8‑101 (MQ=255)


                                                                                             ctccgcc.cccGCGCCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGcc             <  1:6558912/95‑1 (MQ=255)


                                                                                             ctccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGcc             >  1:6053257/7‑101 (MQ=255)


                                                                                              tccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTTACCTGGGGccc            >  1:3577230/6‑100 (MQ=255)


                                                                                              tccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCa            <  1:869739/96‑1 (MQ=255)


                                                                                              tccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCa            <  1:2405457/96‑1 (MQ=255)


                                                                                              tccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCa            >  2:6665029/6‑101 (MQ=255)


                                                                                              tccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCa            <  2:5328451/96‑1 (MQ=255)


                                                                                              tccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCa            >  2:3577990/6‑101 (MQ=255)


                                                                                              tccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGCGCCa            >  2:3088632/6‑101 (MQ=255)


                                                                                               ccgcc.cccGCACCCCCGNCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCaa           <  2:1824999/97‑1 (MQ=255)


                                                                                               ccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCaa           <  2:3209959/97‑1 (MQ=255)


                                                                                               ccgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCaa           >  1:317458/5‑101 (MQ=255)


                                                                                                cgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGTTTTCACCTGGGGCCaaa          <  2:3757785/98‑1 (MQ=255)


                                                                                                cgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCaaa          <  1:2781970/98‑1 (MQ=255)


                                                                                                cgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCaaa          >  2:535469/4‑101 (MQ=255)


                                                                                                cgcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCaaa          <  1:3955461/98‑1 (MQ=255)


                                                                                                 gcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGGCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAg         >  1:6435370/3‑101 (MQ=255)


                                                                                                 gcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAg         <  2:6820494/99‑1 (MQ=255)


                                                                                                 gcc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAg         <  1:2605348/99‑1 (MQ=255)


                                                                                                  cc.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGa        <  1:5421380/100‑1 (MQ=255)


                                                                                                   c.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAt       <  1:1400647/101‑1 (MQ=255)


                                                                                                   c.cccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGAGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAt       >  1:5529202/1‑101 (MQ=255)


                                                                                                      ccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcc     <  1:2919387/101‑1 (MQ=255)


                                                                                                       cccACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGTATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtccc    <  1:3884925/99‑1 (MQ=255)


                                                                                                       cGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtccc    >  1:6899058/1‑101 (MQ=255)


                                                                                                       cGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtccc    <  2:294009/101‑1 (MQ=255)


                                                                                                       cGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtccc    >  1:3730262/1‑101 (MQ=255)


                                                                                                        gCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccg   <  2:6435040/101‑1 (MQ=255)


                                                                                                        gCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccg   >  2:4624628/1‑101 (MQ=255)


                                                                                                        gCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccg   >  2:2769527/1‑101 (MQ=255)


                                                                                                        gCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccg   >  2:1346473/1‑101 (MQ=255)


                                                                                                         cACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgg  <  2:6412053/101‑1 (MQ=255)


GCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......CGG.......C.CCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGG  >  NC_014034/2330098‑2330284

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 27 ≤


ATCG

< 34 ≤


ATCG

< 40 ≤


ATCG