BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 392462	147 (0.420)	57 (0.160)	5/198	36.8	0.35	intergenic (‑110/+33)	RCAP_rcc00363/trmD	hypothetical protein/tRNA (guanine‑N1)‑methyltransferase
*	?	NC_014034	1253896 =	62 (0.170)	57 (0.160)	5/198	36.8	0.35	intergenic (+54/+37)	RCAP_rcc01181/hisH	hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
Rejected: Position hash score below cutoff.

Only 100 of 124 total aligned reads displayed.


TGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGAG.........CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTCCGGG  >  NC_014034/1253796‑1253996


tGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cg                                                                                                      >  2:6798983/1‑101 (MQ=255)


tGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cg                                                                                                      <  2:6586279/101‑1 (MQ=255)


tGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cg                                                                                                      >  2:5118987/1‑101 (MQ=255)


 gggCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cgg                                                                                                     >  2:5088940/1‑100 (MQ=255)


 gggCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cgg                                                                                                     <  2:4874665/101‑2 (MQ=255)


   gCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggag                                                                                                   <  1:5150533/101‑4 (MQ=255)


   gCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggag                                                                                                   >  1:5686398/1‑98 (MQ=255)


   gCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggag                                                                                                   <  1:5892588/101‑4 (MQ=255)


   gCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggag                                                                                                   >  1:2129304/1‑98 (MQ=255)


     aaGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagac                                                                                                 >  2:4426773/1‑96 (MQ=255)


      aGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagccc                                                                                                <  1:5741023/101‑7 (MQ=255)


      aGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagccc                                                                                                <  2:2941479/101‑7 (MQ=255)


       gCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagcccc                                                                                               <  2:751006/101‑8 (MQ=255)


        cTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagccccc                                                                                              <  2:4909667/101‑9 (MQ=255)


        cTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagccccc                                                                                              <  2:397328/101‑9 (MQ=255)


        cTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagccccc                                                                                              <  2:2072434/101‑9 (MQ=255)


        cTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagccccc                                                                                              <  1:5251298/101‑9 (MQ=255)


         tCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagcccccg                                                                                             >  1:4060888/1‑92 (MQ=38)


         tCGGCTTCCAGAACGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagcccccg                                                                                             >  1:6308404/1‑92 (MQ=37)


          cGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGg.........cggagcccccgc                                                                                            >  1:5236487/1‑91 (MQ=38)


                                      gCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGa                                                                         >  1:6633384/1‑101 (MQ=9)


                                      gCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGa                                                                         >  1:4686008/1‑101 (MQ=12)


                                        gAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaaa                                                                       >  2:2652471/1‑101 (MQ=12)


                                        gAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaaa                                                                       >  2:2153241/1‑101 (MQ=12)


                                        gAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaaa                                                                       >  2:385965/1‑101 (MQ=12)


                                        gAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaaa                                                                       >  1:5449076/1‑101 (MQ=12)


                                        gAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGAGCGGCGCCCCCGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaaa                                                                       >  2:2380062/1‑101 (MQ=12)


                                         aaaTAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGaact                                                                      >  2:1508987/1‑99 (MQ=9)


                                         aaaTAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAAt                                                                      >  1:5369622/1‑101 (MQ=9)


                                          aaTAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATc                                                                     >  2:358374/1‑101 (MQ=9)


                                           aTAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATcc                                                                    >  1:6269538/1‑101 (MQ=9)


                                            taacccaaccccgccccgcTCTCATCTTGCCCTAAATCCCTGGGGGGGGGGGGGGG.....GGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCct                                                                   <  2:3210659/92‑1 (MQ=2)


                                            tAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCct                                                                   >  1:3013033/1‑101 (MQ=9)


                                            tAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCct                                                                   >  1:2339168/1‑101 (MQ=9)


                                            aaacccacccccgccccgcTCTCATCTTGCCCTAAATCCCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCct                                                                   <  2:1711473/92‑1 (MQ=2)


                                             aaaCCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctc                                                                  >  2:3574807/1‑101 (MQ=9)


                                             aaaCCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctc                                                                  >  2:3964083/1‑101 (MQ=9)


                                             aaaCCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctc                                                                  >  2:5772795/1‑101 (MQ=9)


                                             aaaCCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctc                                                                  >  1:1626629/1‑101 (MQ=9)


                                              aaCCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctct                                                                 >  1:6587515/1‑101 (MQ=9)


                                              aaCCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctct                                                                 >  1:727808/1‑101 (MQ=9)


                                               cccgccccccccccgcTCTCATCTTCCCCTAAATCCCG.....CGGGGGTGCG.....GGGGCGGACCCCCCGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCtctc                                                                <  2:4751351/95‑1 (MQ=2)


                                               cccGACCCCGCCCCGCTCTCATCTTGCCCTAAATCCCT.....GGGGGGGGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCtctc                                                                <  2:3034648/100‑1 (MQ=2)


                                               cccGACCCCCCCCCGCTCTCATCTTGCCCTAAATCCCT.....CGGGGGTGCG.....GGGGGGGACCCCCCGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCtctc                                                                <  2:2836045/100‑1 (MQ=9)


                                                ccGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCtctcc                                                               >  1:2119061/1‑100 (MQ=9)


                                                 cgcccccgccccgcTCTCATCTTGCCCTAAATCCCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCAc                                                              <  2:5620518/97‑1 (MQ=2)


                                                  gATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACg                                                             >  2:6454790/1‑101 (MQ=9)


                                                   aTCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACgg                                                            >  2:316377/1‑101 (MQ=9)


                                                   aTCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACgg                                                            >  1:1996565/1‑101 (MQ=9)


                                                   aTCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACgg                                                            >  1:3095966/1‑101 (MQ=9)


                                                   aTCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACgg                                                            >  1:4584641/1‑101 (MQ=9)


                                                   aTCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACgg                                                            >  1:4803610/1‑101 (MQ=9)


                                                   aTCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACgg                                                            >  1:1179820/1‑101 (MQ=9)


                                                   aTCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACgg                                                            >  2:1139332/1‑101 (MQ=9)


                                                    tCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGc                                                           >  1:1545029/1‑101 (MQ=9)


                                                        gccccgcTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTcc                                                       >  1:1399708/1‑101 (MQ=9)


                                                        gccccgcTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTcc                                                       >  2:5282158/1‑101 (MQ=9)


                                                        cccccgcTCTCATCTTGCCCTAAACCCCT.....CGGGGGTGGGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTcc                                                       <  2:5218709/100‑1 (MQ=9)


                                                         ccccgcTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCa                                                      >  2:2669166/1‑101 (MQ=9)


                                                             gcTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTc                                                  >  1:6839975/1‑101 (MQ=9)


                                                             gcTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTc                                                  >  1:3758991/1‑101 (MQ=9)


                                                             gcTCTCATCTTG.CCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCa                                                 >  1:4312414/1‑101 (MQ=2)


                                                              ctctCATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCa                                                 >  2:2603671/1‑101 (MQ=9)


                                                               tctcATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAg                                                >  2:5053429/1‑101 (MQ=9)


                                                               tctcATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAg                                                >  2:6389894/1‑101 (MQ=9)


                                                               tctcATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGGTCAg                                                >  2:2293350/1‑101 (MQ=9)


                                                                ctcATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAgg                                               >  2:3575244/1‑101 (MQ=9)


                                                                  cATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCANGGCTTCCAGTTCAggga                                             >  2:3059400/1‑99 (MQ=9)


                                                                  cATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaa                                             >  1:4424794/1‑101 (MQ=9)


                                                                  cATCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaa                                             >  2:3697327/1‑101 (MQ=9)


                                                                   aTCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGTCTTCCAGTTCAAGaaa                                            >  2:459963/1‑101 (MQ=2)


                                                                   aTCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGGGCGGGGCCCCCGCCGGGCCGCCTCGGGGAAAGGCGAGGGGAAATCCTCCCACGGCTTTTAGTTCGGGaaa                                            >  2:3194037/1‑101 (MQ=2)


                                                                    tCTTGCCCTAAATACCT.....CGGGGGTGCGGGGGCGGAGCCCC.....CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAAt                                           >  2:632473/1‑101 (MQ=9)


                                                                                                             cggagcccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGa            >  2:5735963/10‑101 (MQ=255)


                                                                                                             cggagcccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGa            >  2:3157891/10‑101 (MQ=255)


                                                                                                              ggagcccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGAt           >  2:3607364/9‑101 (MQ=255)


                                                                                                              ggagcccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGAt           >  1:3252577/9‑101 (MQ=255)


                                                                                                              ggagcccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGAt           >  2:6435732/9‑101 (MQ=255)


                                                                                                              ggagcccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGAt           >  2:490925/9‑101 (MQ=255)


                                                                                                               gagcccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGACCGGTGCGCTGCGAtt          >  2:1260788/8‑101 (MQ=255)


                                                                                                                cccccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGAttt         <  1:1381672/95‑1 (MQ=255)


                                                                                                                agcccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGAttt         >  1:5872321/7‑101 (MQ=255)


                                                                                                                agcccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGAttt         >  2:1105198/7‑101 (MQ=255)


                                                                                                                 cccgccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTtc        <  1:1721029/96‑1 (MQ=255)


                                                                                                                 cccccggcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTtc        <  2:77688/95‑1 (MQ=255)


                                                                                                                 ccccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTtc        <  1:6426510/96‑1 (MQ=255)


                                                                                                                 ccccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTtc        <  1:6455120/96‑1 (MQ=255)


                                                                                                                  cccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTtct       <  1:2650585/97‑1 (MQ=255)


                                                                                                                  cccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTtct       <  2:4191632/97‑1 (MQ=255)


                                                                                                                  cccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTtct       >  2:2625924/5‑101 (MQ=255)


                                                                                                                   ccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTtctc      <  1:1655901/98‑1 (MQ=255)


                                                                                                                   ccccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTtctc      >  1:4003273/4‑101 (MQ=255)


                                                                                                                    ccggcCGGGGCGCCTCGGCGAAAGCCGAGGCGTAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTcc     <  2:5248405/98‑1 (MQ=255)


                                                                                                                    cccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTcc     >  1:1459395/3‑101 (MQ=255)


                                                                                                                    cccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTcc     <  2:1700642/99‑1 (MQ=255)


                                                                                                                     cggcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTCCg    <  2:2339073/99‑1 (MQ=255)


                                                                                                                     ccgcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTCCg    <  2:1179772/100‑1 (MQ=255)


                                                                                                                       gcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTCCggg  >  1:2379369/1‑101 (MQ=255)


                                                                                                                       gcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTCCggg  >  2:5839860/1‑101 (MQ=255)


                                                                                                                       gcCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTCCggg  >  1:6566441/1‑101 (MQ=255)


TGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCT.....CGGGGGTGCG.....GGAG.........CGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAATTCGAGATGATCCGCAGCCCGGTGCGCTGCGATTTCTCCGGG  >  NC_014034/1253796‑1253996

Base quality scores:


ATCG

< 3 ≤


ATCG

< 19 ≤


ATCG

< 27 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG