BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 408471	302 (0.950)	76 (0.240)	16/178	26.8	0.27	intergenic (+89/+59)	glnA1/dapA	glutamine synthetase/dihydrodipicolinate synthase
*	?	NC_014034	1640006 =	119 (0.330)	76 (0.240)	16/178	26.8	0.27	intergenic (+86/‑59)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
Rejected: Position hash score below cutoff.

Only 100 of 245 total aligned reads displayed.


ATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGG.....G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCC  >  NC_014034/1639906‑1640106


aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTTCCCCAAATA.TCCC.GGGGGGCC.C..gggg.....g                                                                                                                  >  2:6277640/1‑101 (MQ=255)


aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..gggg.....g                                                                                                                  <  1:3736148/101‑1 (MQ=255)


 tCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTT.GGGGG.AAGATGAAAACCATCCC.CTT.CCTCTTTCCCCAAATA.TACC.GGGGGGCC.C..cggg.....gg                                                                                                                 >  1:5501915/1‑100 (MQ=37)


  cTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTT.TGGGG.AAGATGAAAACCATCCC.TTT.CATCTTTCCCCCAATA.TCCCGGGGGGGCC.C..GGGG.....g.....c                                                                                                            >  1:6217827/1‑101 (MQ=25)


  cTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTT.TGGGC.AAGATGAAACCCATCCC.TTT.CATCTTTCCCCAAATA.TCCC.CGGGGGCC.C..gggg.....ggc                                                                                                                >  1:4427786/1‑99 (MQ=37)


  cTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..gggg.....ggc                                                                                                                <  1:5798189/101‑3 (MQ=255)


   ttCCGGATGTGACTTTCGATGCCTCCGGCGGGGGAATTT.TGGGC.AAGATGAAAACCATCCC.CTT.CATCTTTCCCCAAATA.TCCC.CGGGGGCC.C..gggg.....ggcg                                                                                                               >  1:1016179/1‑98 (MQ=37)


    tCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTT.TGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.CGGGGGCC.C..gggg.....gggag                                                                                                              >  1:5051042/1‑97 (MQ=37)


    tCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTT.TGGGG.AAGAAGAAAACCATCCC.TTT.CATCCTGCCCCAAATA.TCCC.CGGGGGCC.C..GGGG.....g.....g..g.....cg                                                                                                  >  1:2648334/1‑100 (MQ=38)


     ccGGATGTGACTTTCGATGCCTCCGGCGGGGATATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..gggg.....ggcagc                                                                                                             <  2:3386792/101‑6 (MQ=255)


      cGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTT.GGGGG.AAGATGAAAACCAACCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..gggg.....ggcaggg                                                                                                            >  1:3035976/1‑95 (MQ=25)


       ggATGTGACTTTCGATGCCTCCGGCGGGGGTATTT.GGGGC.AAGATGCAACCCATCCC.CTT.CATCTTTGCCCCACTA.TACC.CGGGCGCC.T..gggg.....ggctgggc                                                                                                           >  2:200724/1‑94 (MQ=19)


       ggATGTGACTTTCGATGCCTCCGGCGGGGATATTT.TGGGC.AAGATGAAACCCATCCC.TTT.CATCTTTCCCCCAATA.TCCC.GGGGGGCC.C..gggg.....ggcagcgc                                                                                                           >  1:2747940/1‑94 (MQ=37)


        gATGTGACTTTCGATGCCTCCGGCGGGGATATTT.TGGGG.AAGATGAAACCCATCCC.CTT.CATCCTTCCCCCAATATTCCC.GCGGGGCC.C..GGGG.....g.....c..ggagcc                                                                                                    >  1:352945/1‑96 (MQ=25)


        gATGTGACTTTCGATGCCTCCGGCGGGGATATTT.GGGGC.AAGATGAAAACCATCCC.TTT.CATCTTTCCCCAAATA.TCCC.GGGGGGCC.C..gggg.....ggcagcgcg                                                                                                          >  1:3876768/1‑93 (MQ=25)


         aTGTGACTTTCGATGCCTCCGGCGGGGGTATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTTCCCCCAATA.TCCC.GGGGGGGC.C..GGGG.....g.....g..g.....cgcgccc                                                                                             >  1:5683576/1‑95 (MQ=25)


         aTGTGACTTTCGATGCCTCCGGCGGGGATATTT.TGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..gggg.....ggccgcgccc                                                                                                         >  2:6666272/1‑92 (MQ=25)


         aTGTGACTTTCGATGCCTCCGGCGGGGATATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..gggg.....ggcagcgccc                                                                                                         <  2:29644/101‑10 (MQ=255)


           gtgACTTTCGATGCCTCCGGCGGGGATATTT.TGGGC.AAAATGAAACCCATCCC.CTT.CATCTTTCCCCCAATA.TCCC.GGGGGGCC.C..GGGG.....g.....g..g.....cgcgccccc                                                                                           >  1:1105827/1‑93 (MQ=25)


                   cgatccgcccGGGGGGGTTATTT.GGGGA.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.G..GGGGGGCA.G.....C..G.....CCCCCCGCCACtt                                                                                       <  2:5994630/93‑1 (MQ=12)


                   cGATCCCGCCGGCGGGGATATTT.GGGGC.AAGATGAACCCCATCCC.TTT.CATCTTGCCCCAAATA.CCCC.GGGGGGCC.G..GGGGGGCA.G.....C..G.....CCCCCCGCCACtt                                                                                       <  2:5012088/101‑1 (MQ=18)


                   cGATCCCCCGGGCGGGTTGATTG.GGGGC.AAGAGCAAACCCATCCC.TTT.CATCTTGCCCCAAATA.CCCC.GGGGGGCC.G..GGGGGGCA.G.....C..G.....CCCCCCGCCACtt                                                                                       <  2:4267619/101‑1 (MQ=9)


                    gATGCCTCCGGCGGGGATATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CCTCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTc                                                                                      >  2:148164/1‑101 (MQ=21)


                      tcccTCGGGGGGGGATATTG.GGGGC.AAGATAAACCCCATCCC.TTT.CATCTTCCCCCAAATA.CCCG.GGGGGGCC.G..GGGGGGCA.G.....C..C.....CCCCCCGCCACTTCCg                                                                                    <  1:6874780/99‑1 (MQ=9)


                         ccccGGGGGGGATTTTG.GGGAA.AAGATGACCCCCACCCT.TTT.CATCTTCCCCCAAATA..CCC.GGGGGGCC.C..GGGGGGGCAG.....C..C.....CCCCCCGCCACTTCCGCCa                                                                                 <  2:2797878/99‑1 (MQ=9)


                         cTCGGGGGGGGAT.TTT.GGGCC.AAAGAGAAACCCCACCC.TTTCCCTCTTGCCCCAAATA.CCCG.GGGGGGCC.G..GGGG.....G.....CCGGCC...CCCCCCGCCACTTCCGCCa                                                                                 <  2:2740648/101‑1 (MQ=255)


                           ccGGCGGGGATATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCCCg                                                                               >  1:6915235/1‑101 (MQ=21)


                               cggGGATATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGc                                                                           >  2:4596058/1‑101 (MQ=21)


                                ggggATTTTTGGGGGA.AAGAT.AAACCCCCCCC.TTT.CCTTTTCCCCCAAAAT.CCCC.GGGGGGGC.CGGGGGG.....G.....C..GGCC..CCCCCCGCCACTTCCGCCACGGGGc                                                                           <  1:2149554/101‑1 (MQ=255)


                                ggggATATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCa                                                                          >  1:4871252/1‑101 (MQ=25)


                                ggggANTTTG.GGGGCAAAGAGAAACCCCCCCCC.TTT.CTTC.TCCCCCAAAAT.CCCC.GGGGGGCC.CGGGGGG.....G.....C..GCCC..CCCCCCGCCACTTCCGCCACGGGGc                                                                           <  1:2896784/101‑1 (MQ=255)


                                  ggATATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAgc                                                                        >  1:6032582/1‑101 (MQ=25)


                                  ggATATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAgc                                                                        >  2:4874535/1‑101 (MQ=25)


                                   gATATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAgcg                                                                       >  2:4526657/1‑101 (MQ=21)


                                   gATATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACNTCCGCCACGGGGCAgcg                                                                       >  2:756059/1‑101 (MQ=25)


                                    atatTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAgcgc                                                                      >  1:1548718/1‑101 (MQ=25)


                                     tatTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                                     >  1:4483629/1‑101 (MQ=25)


                                     tatTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                                     >  2:6973202/1‑101 (MQ=25)


                                      atTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                                    >  1:2632363/1‑101 (MQ=25)


                                       ttt.GGGGC.AAAAATAAACCCCCCCCTTTT.CTGCTTGCCCAAAATC.GCCG.GGGGGGCCGG..GGGG.....G.....C..GGCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                                    <  1:6106825/101‑1 (MQ=255)


                                       ttt.GGGGA.AAGAT.CAACCCCCCCC.CTT.CCTCCTTCCCCAAAAT.CCCC.GGGGGGCC.C..GGGG.....GGC...C..GGCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                                   <  2:5469325/101‑1 (MQ=255)


                                         t.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                 >  1:3627156/1‑101 (MQ=25)


                                         t.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                 >  1:1612168/1‑101 (MQ=25)


                                           ggggC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc                                                                >  1:7025069/1‑101 (MQ=25)


                                           ggggC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCACCGCCCCGGc                                                                >  2:1122828/1‑101 (MQ=21)


                                              gC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGt                                                             >  1:1935683/1‑101 (MQ=25)


                                              gC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGt                                                             >  2:5223099/1‑101 (MQ=25)


                                              gC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGt                                                             >  2:4205288/1‑101 (MQ=25)


                                               c.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                            >  2:2708863/1‑101 (MQ=25)


                                               c.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                            >  2:6603792/1‑101 (MQ=25)


                                                 aaGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtgg                                                           >  2:3289513/1‑99 (MQ=21)


                                                 aaGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                                           >  2:2838922/1‑101 (MQ=25)


                                                   gATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGAc                                                         >  1:1822176/1‑101 (MQ=25)


                                                    gacaaaCCCCACCC.TTTCCCTCTTGCCCAAAACT.CCCG.GGGGGGCC.C..GGGGC....GCCC..C..C.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGAc                                                         <  2:5853749/98‑1 (MQ=255)


                                                    aTGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg                                                        >  1:3459021/1‑101 (MQ=25)


                                                    aTGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg                                                        >  2:1926625/1‑101 (MQ=25)


                                                     tGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa                                                       >  1:901318/1‑101 (MQ=25)


                                                     aaacaCCCACCCC.TTC.CCTCTT.CCCCAAA.A.TCCCGGGGGGGCC.C..GGGG.....GGGCCCC..C.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa                                                       <  2:6217508/97‑1 (MQ=255)


                                                      gAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                      >  1:1056924/1‑101 (MQ=25)


                                                        aaCCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                    >  1:2673738/1‑101 (MQ=25)


                                                              tCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                                              >  2:2413295/1‑101 (MQ=25)


                                                              cccc.TTTCCATCTTCCCCAAAATC.CCCG.GGGGGGCC.G..GGGG.....GCCAC.C..C.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                                               <  1:484744/100‑1 (MQ=255)


                                                               ccc.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGACCGTTGACGAAGGAGACcgc                                             >  1:5633611/1‑101 (MQ=21)


                                                                 c.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGa                                           >  2:3051003/1‑101 (MQ=25)


                                                                 c.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGa                                           >  1:457654/1‑101 (MQ=25)


                                                                       cttCTTGCCCCAAATC.CCGG.GGGGGGCG.G..GGGG.....G.....C..GCCCC.CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                       <  1:738704/99‑1 (MQ=255)


                                                                       cATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                       >  2:2649884/1‑101 (MQ=25)


                                                                        aTCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                                      >  1:6616343/1‑101 (MQ=25)


                                                                        aTCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGAGAtcgga                                      >  1:5885375/1‑97 (MQ=21)


                                                                         tCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                                     >  2:3782470/1‑101 (MQ=25)


                                                                         tCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                                     >  1:3213181/1‑101 (MQ=25)


                                                                          tctcccccAAAAC.CCCC.GGGGGGCC.C..GGGG.....G.....C..CCCCCCCCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                                     <  2:1799740/97‑1 (MQ=255)


                                                                          cTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                                    >  2:5647518/1‑101 (MQ=25)


                                                                          cTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                                    >  1:236132/1‑101 (MQ=25)


                                                                          cTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                                    >  2:4061580/1‑101 (MQ=25)


                                                                            tGCCCCAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                                  >  2:6242202/1‑101 (MQ=25)


                                                                            tGCCCAAAATA.TCCC.AGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                                  >  1:6867346/1‑101 (MQ=25)


                                                                                 cAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc                             >  1:6453110/1‑101 (MQ=25)


                                                                                 cAAATA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc                             >  2:6909770/1‑101 (MQ=25)


                                                                                  aaaTA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATcc                            >  2:4437359/1‑101 (MQ=25)


                                                                                  aaaTA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATcc                            >  1:1700238/1‑101 (MQ=25)


                                                                                   aaTA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt                           >  1:1365116/1‑101 (MQ=25)


                                                                                   aaTA.TCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt                           >  2:6575473/1‑101 (MQ=25)


                                                                                    ata.tCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                          >  1:1160063/1‑101 (MQ=37)


                                                                                    ata.tCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                          >  2:6527722/1‑101 (MQ=37)


                                                                                     ta.tCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCACAAGATCCTGa                         >  2:6810758/1‑101 (MQ=25)


                                                                                      a.tCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt                        >  2:2564828/1‑101 (MQ=37)


                                                                                        tCCC.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATc                       >  1:4221367/1‑101 (MQ=37)


                                                                                           c.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                    >  2:1209759/1‑101 (MQ=37)


                                                                                           c.GGGGGGCC.C..GGGGGGCA.G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                    >  1:989722/1‑101 (MQ=37)


                                                                                                         gtcatggcag.....c..g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc           >  2:340549/10‑101 (MQ=255)


                                                                                                         cggggggcag.....c..g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc           >  1:5261442/10‑101 (MQ=255)


                                                                                                          ggggggcag.....c..g.....cCCCCCGCCGCTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg          >  1:3109105/9‑101 (MQ=255)


                                                                                                          ggggggcag.....c..g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg          >  2:649313/9‑101 (MQ=255)


                                                                                                          ggggggcag.....c..g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg          >  1:5386721/9‑101 (MQ=255)


                                                                                                          ggggggcag.....c..g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg          >  2:87124/9‑101 (MQ=255)


                                                                                                           gggggcag.....c..g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCga         >  1:3370037/8‑101 (MQ=255)


                                                                                                           gggggcag.....c..g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCga         >  1:6197443/8‑101 (MQ=255)


                                                                                                                 ag.....c..g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGc   >  1:5670922/2‑101 (MQ=255)


                                                                                                                  g.....c..g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCgag  >  2:3715678/1‑99 (MQ=255)


ATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTT.GGGGC.AAGATGAAACCCATCCC.TTT.CATCTTGCCCCAAATA.TCCC.GGGGGGCC.C..GGGG.....G.....C..G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCC  >  NC_014034/1639906‑1640106

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 27 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG