BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 974307	14 (0.050)	18 (0.060)	6/172	33.3	0.29	intergenic (+187/+72)	RCAP_rcc00884/RCAP_rcc00885	hypothetical protein/hypothetical protein
*	?	NC_014034	2880557 =	76 (0.210)	18 (0.060)	6/172	33.3	0.29	coding (1028/1053 nt)	pdxA	4‑hydroxythreonine‑4‑phosphate dehydrogenase
Rejected: Position hash score below cutoff.

Only 100 of 110 total aligned reads displayed.


CAGCTCATGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........C..CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGC  >  NC_014034/2880457‑2880635


caGCTCATGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCggggg                                                                                                     <  2:5465154/101‑1 (MQ=255)


caGCTCATGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCggggg                                                                                                     >  2:6076382/1‑101 (MQ=255)


  gCTCATGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTc                                                                                                   >  1:6902390/1‑101 (MQ=255)


   cTCATGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTcg                                                                                                  >  2:4388726/1‑100 (MQ=255)


   cTCATGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTcc                                                                                                  <  1:4145476/101‑1 (MQ=255)


   cTCATGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTcc                                                                                                  <  1:1500048/101‑1 (MQ=255)


   cTCATGGGCCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTCCCAATATCCCGGGGGTcc                                                                                                  >  2:2359485/1‑101 (MQ=255)


    tCATGGGTCGCGATCACCTCGCGCAAGGGGGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCCGGCGTCCg                                                                                                 >  2:3308570/1‑101 (MQ=255)


    tCATGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCg                                                                                                 >  1:5313363/1‑101 (MQ=255)


    tCATGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCg                                                                                                 <  1:3731473/101‑1 (MQ=255)


    tCATGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCg                                                                                                 >  1:6748373/1‑101 (MQ=255)


     cATGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCgg                                                                                                >  1:2971409/1‑101 (MQ=255)


     cATGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCgg                                                                                                >  1:2232200/1‑101 (MQ=255)


     cATGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCACGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCgg                                                                                                >  2:2863380/1‑101 (MQ=255)


      aTGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCggg                                                                                               >  1:5474628/1‑101 (MQ=255)


      aTGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCggg                                                                                               <  1:3413619/101‑1 (MQ=255)


       tGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCgggg                                                                                              >  1:911435/1‑101 (MQ=255)


        gggTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCggggg                                                                                             <  1:3506502/101‑1 (MQ=255)


        gggTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCggggg                                                                                             >  2:435876/1‑101 (MQ=255)


         ggTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGc                                                                                            <  1:1774589/101‑1 (MQ=255)


          gTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCa                                                                                           >  1:448096/1‑101 (MQ=255)


           tCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCag                                                                                          <  1:6261717/101‑1 (MQ=255)


           tCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCag                                                                                          <  1:5787831/101‑1 (MQ=255)


           tCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCag                                                                                          <  2:2957657/101‑1 (MQ=255)


           tCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCag                                                                                          <  1:6305781/101‑1 (MQ=255)


            cgcgATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCaga                                                                                         <  2:2509831/101‑1 (MQ=255)


            cgcgATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCaga                                                                                         <  1:4122169/101‑1 (MQ=255)


            cgcgATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCaga                                                                                         >  1:5308238/1‑101 (MQ=255)


             gcgATCATCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCagag                                                                                        <  2:6057318/101‑1 (MQ=255)


             gcgATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCagag                                                                                        <  2:290236/101‑1 (MQ=255)


             gcgATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCagag                                                                                        <  2:5416726/101‑1 (MQ=255)


              cgATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGc                                                                                       <  1:362057/101‑1 (MQ=255)


               gATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGcc                                                                                      >  1:6596119/1‑101 (MQ=255)


               gATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGcc                                                                                      <  1:1977948/101‑1 (MQ=255)


                aTCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGccc                                                                                     <  1:368400/101‑1 (MQ=255)


                 tCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGcccc                                                                                    <  2:4228793/101‑1 (MQ=255)


                  cACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGccccc                                                                                   <  2:676435/101‑1 (MQ=255)


                  cACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGccccc                                                                                   <  2:6395185/101‑1 (MQ=255)


                  cACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGccccc                                                                                   <  2:5666427/101‑1 (MQ=255)


                  cACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGccccc                                                                                   >  1:285433/1‑101 (MQ=255)


                  cACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGccccc                                                                                   <  1:4133407/101‑1 (MQ=255)


                   cccccgcggcaGGGCGGCCGGCCCGTCACCCGCAGCAAAACCCCGCCCCCTCCTTTTTCATCTTGCTTCAAATACCCCGGGGGCCGGGGGGCAGAGccccc                                                                                   <  2:14301/91‑1 (MQ=12)


                   aCCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCcg                                                                                  >  1:1397367/1‑101 (MQ=255)


                    ccTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCcgg                                                                                 >  1:3907982/1‑101 (MQ=255)


                       cgcgCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCcggcg..........g                                                                    >  2:4131015/1‑101 (MQ=255)


                        gcgcAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCggcg..........gc                                                                   <  2:5307972/101‑1 (MQ=255)


                         cgcAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCggcg..........gcg                                                                  <  1:6510548/101‑2 (MQ=255)


                          gcAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCggcg..........gcgc                                                                 >  1:1229102/1‑99 (MQ=255)


                          gcAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGGCCGAGGGGAGAGCCCCCggcg..........gcgc                                                                 >  2:5356768/1‑99 (MQ=255)


                           cAAGGGCGG.CCGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCACCTATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cg                                                     >  1:430535/1‑101 (MQ=37)


                           cAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cg                                                     >  1:5937049/1‑101 (MQ=255)


                           cAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cg                                                     >  1:1093948/1‑101 (MQ=255)


                            aaGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGTGAGGTGGGGGGCGGAGGCCCcggcg..........gggggt                                                               >  1:6938373/1‑96 (MQ=255)


                            aaGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgt                                                    >  2:5037859/1‑100 (MQ=255)


                            aaGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgt                                                    >  2:312885/1‑100 (MQ=255)


                             aGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtc                                                   >  1:358983/1‑99 (MQ=255)


                              gggCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATACCGCGGGTCCGGGGGCAGGGCCCCcgggg..........gagggtgc                                                             >  1:3335745/1‑94 (MQ=255)


                               ggcgg.cAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGTGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtcac                                                 <  2:3699044/101‑5 (MQ=255)


                               ggcgg.cAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGTGGGCAGAGCCCCCGGCG..........GC.........g..cgtcac                                                 >  1:4190755/1‑97 (MQ=255)


                               ggcgg.cAGCCCGTCAATCGCAGCCAAAGCCCGCCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtcac                                                 <  1:5577049/101‑5 (MQ=255)


                                aatgacAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtcac                                                 >  2:4473962/6‑97 (MQ=25)


                                 cgg.cAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtcacag                                               >  1:2537502/1‑95 (MQ=255)


                                 cgg.cAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtcacag                                               >  2:6570197/1‑95 (MQ=255)


                                 cgg.cAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtcacag                                               <  1:5714889/101‑7 (MQ=255)


                                     cAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtcacagccg                                            <  1:980955/101‑10 (MQ=25)


                                                                          tttCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCcgcg                  >  2:53308/1‑101 (MQ=2)


                                                                          tttCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCcgcg                  >  2:2984580/1‑101 (MQ=2)


                                                                           ttCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGa                 >  1:306240/1‑101 (MQ=9)


                                                                           ttCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGa                 >  1:3473087/1‑101 (MQ=9)


                                                                            tCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGAt                <  1:4539919/101‑1 (MQ=9)


                                                                            tCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGAGAt                >  1:1067246/1‑101 (MQ=2)


                                                                             cATCTTGCTCCAAATACCCCGGGGGTCCGGGGGCAGGCCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATc               <  1:1847620/101‑1 (MQ=9)


                                                                               tCTTGCTTCAAATATCCCGGGGGGCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAg             <  2:5616254/101‑1 (MQ=9)


                                                                                cTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGGGATCAGa            >  1:1040235/1‑101 (MQ=9)


                                                                                 ttGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGAc           >  1:2662480/1‑101 (MQ=9)


                                                                                  tGCTTCAAATATCCGGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACt          <  2:3975010/101‑1 (MQ=9)


                                                                                  tGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACt          >  1:6544169/1‑101 (MQ=9)


                                                                                  tGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACt          >  1:6171083/1‑101 (MQ=9)


                                                                                  tGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACt          >  1:2039672/1‑101 (MQ=9)


                                                                                  tGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACt          >  1:2658808/1‑101 (MQ=9)


                                                                                  tGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACt          >  1:6016920/1‑101 (MQ=9)


                                                                                   gCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACtg         >  2:3709694/1‑101 (MQ=12)


                                                                                   gCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACtg         >  1:4170815/1‑101 (MQ=12)


                                                                                    cTTCAAATACCCCGGGGGTCGGGGGGCAGAGCCCCCGGCG..........GCGCGTCACAGCCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACtgt        <  1:626368/101‑1 (MQ=12)


                                                                                     ttCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACtgtg       >  2:237304/1‑101 (MQ=12)


                                                                                     ttCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACtgtg       <  1:6870740/101‑1 (MQ=12)


                                                                                     ttCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGAGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACtgtg       >  2:4898503/1‑101 (MQ=12)


                                                                                      tCAAATATCCCGGGGGTCCGGGGGGAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGc      <  2:6938000/101‑1 (MQ=12)


                                                                                      tCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGc      >  1:1849678/1‑101 (MQ=12)


                                                                                       cAAATATCCGGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GCGCGTCACAGCCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCg     <  2:1229054/101‑1 (MQ=12)


                                                                                       cAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCg     >  1:4542350/1‑101 (MQ=12)


                                                                                       cAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCg     >  1:340773/1‑101 (MQ=12)


                                                                                        aaaTATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCgg    >  2:4943680/1‑101 (MQ=12)


                                                                                         aaTATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCggg   >  1:5317028/1‑101 (MQ=12)


                                                                                         aaTATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCggg   >  1:1133669/1‑101 (MQ=12)


                                                                                          atatCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GCGCGTCACAGCCGCGCCGCCCCCATCTTCGCCGCCATCGTCCAGGCCGCGATCAGACTGTGCGGGc  >  2:4748683/1‑101 (MQ=12)


                                                                                          atatCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GCGCGTCACAGCCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGc  >  2:5768259/1‑101 (MQ=12)


                                                                                          atatCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GCGCGTCACAGCCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGc  >  1:2411654/1‑101 (MQ=12)


                                                                                          atatCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GCGCGTCACAGCCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGc  <  2:4602184/101‑1 (MQ=12)


                                                                                          atatCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GCGCGTCACAGCCGCGCCGCCCCCACCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGc  >  1:4268087/1‑101 (MQ=12)


CAGCTCATGGGTCGCGATCACCTCGCGCAAGGGCGG.CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........C..CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGC  >  NC_014034/2880457‑2880635

Base quality scores:


ATCG

< 3 ≤


ATCG

< 19 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG