Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 1,395,675 | A→T | 6.1% | intergenic (+487/‑444) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 1,395,675 | 0 | A→T | 6.1% | 52.0 0.0 ‑0.6 | 371 | intergenic (+487/‑444) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
Reads supporting (aligned to +/- strand): new base (13/9): ref base (199/146): total (213/158) | ||||||||||
Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.71e-01 |
Only 100 of 429 total aligned reads displayed.
CCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCC > NC_014034/1395575‑1395775
|
ccccGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTa < 1:3423121/101‑1 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTa < 1:1436767/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAg < 1:2642796/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGt < 2:6188429/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGt < 2:854318/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGTATCGAAACATCTGCATGTAGTcg > 2:5544605/1‑101 (MQ=255)
gcgGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcg > 2:3238871/1‑101 (MQ=255)
gggggCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcggc > 2:7079413/1‑101 (MQ=255)
ggggCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcggcg > 1:5138567/1‑101 (MQ=255)
gTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTGGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGACGGCG.G.GCAg > 2:3326100/1‑101 (MQ=255)
gTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAg < 2:4400437/101‑1 (MQ=255)
gTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAg > 1:116810/1‑101 (MQ=255)
tGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGt < 2:3791909/101‑1 (MQ=255)
tGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGt > 1:2140648/1‑101 (MQ=255)
ggATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGtt > 1:2364458/1‑101 (MQ=255)
ggATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGtt > 2:2118791/1‑101 (MQ=255)
ggATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGtt < 1:4342798/101‑1 (MQ=255)
gATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTc < 1:1351721/101‑1 (MQ=255)
gATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTc > 2:2349474/1‑101 (MQ=255)
aTCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCg < 1:968453/101‑1 (MQ=255)
aTCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCg < 1:6074385/101‑1 (MQ=255)
tCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGa > 2:1536366/1‑101 (MQ=255)
gAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.Gc < 1:6592525/101‑1 (MQ=255)
gAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.Gc > 2:2596562/1‑101 (MQ=255)
gAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.Gc > 2:1132333/1‑101 (MQ=255)
aaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCg > 1:1866102/1‑101 (MQ=255)
aaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCg < 1:6678770/101‑1 (MQ=255)
accaccTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGc < 1:6141863/101‑1 (MQ=255)
ccTTGCGGATTGTCACTGGCGCGGGGCAAATCGTCGCACCCCACGCGGGGACGAGAATCGAAACATCTGAATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTc < 2:1269876/101‑1 (MQ=255)
ttGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGc > 2:6102644/1‑101 (MQ=255)
gCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTc > 2:5014717/1‑101 (MQ=255)
gCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTc > 2:5240648/1‑101 (MQ=255)
gCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTc < 2:6331316/101‑1 (MQ=255)
cGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTcc > 1:4086726/1‑101 (MQ=255)
ggATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTccc > 1:2916539/1‑101 (MQ=255)
aTTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGGG.G.GCAGTTCGA.GCCGCAGTCGCTccccc > 1:4977694/1‑101 (MQ=255)
ttGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTcccccc < 2:1891281/101‑1 (MQ=255)
tGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCACTCGCTCCCCCcg < 1:6268872/101‑1 (MQ=255)
tGTCACTTTCGCGGGGCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCcg < 2:5631423/101‑1 (MQ=255)
gTCGCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCcgc > 1:6825014/1‑101 (MQ=255)
cACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCgg > 1:6461341/1‑101 (MQ=255)
cTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCgggg > 2:1408783/1‑101 (MQ=255)
cTTTCGCGGGACGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCgggg > 2:356006/1‑101 (MQ=255)
tttCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCggggg > 1:1521216/1‑101 (MQ=255)
ttCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGc > 2:344877/1‑101 (MQ=255)
ttCGCGGGGCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGGCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGc < 1:5344912/101‑1 (MQ=255)
tggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGt > 1:2251706/11‑101 (MQ=2)
ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTg > 2:1700774/10‑101 (MQ=2)
ggggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGa < 1:2594620/101‑1 (MQ=255)
gggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:4010549/101‑1 (MQ=255)
ggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:2457405/101‑1 (MQ=255)
gccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGAt < 2:4224277/95‑1 (MQ=2)
gCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:192187/101‑1 (MQ=255)
ccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATc < 1:5974509/96‑1 (MQ=2)
cGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGa > 1:1221912/1‑101 (MQ=255)
gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:1940605/1‑101 (MQ=255)
gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:105771/1‑101 (MQ=255)
ctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG.GCGAACACCGA.TACCCCGTCGCTCCCCCCCCGGGGGCGTGGATCGaa > 1:429044/3‑101 (MQ=2)
tgCGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACACCCCGAACCTGTCGGCG.GCGAACACCGATACCGC.GTCGCTCCCGCCGCGGGGGCGTGGATCGagc > 2:5848258/2‑99 (MQ=2)
aGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGACGTGGATCGAAAc > 2:690396/1‑101 (MQ=255)
cggcGCCCCCCCCGGGGGGGCGTGGATCGAAACATCTGCTGGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTg < 2:6816205/98‑1 (MQ=25)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgg > 1:6699157/1‑101 (MQ=255)
gTCGCCCCCCTCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTAGATCGAAACTgg < 1:5082973/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCATTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGt < 1:4585699/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGt > 2:288910/1‑101 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTGGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTa < 2:2804532/101‑1 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTa > 1:5692807/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGCGGATCGGAACTGGTAt > 2:5088065/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCTTGTCCGCATCGAA.GCTGGTCAC.ATCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcggcgta < 1:4558574/101‑7 (MQ=2)
cccccGGGGGGGCGGGGATCGAAACATCTGCATGTAGTCGGGG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGAt < 1:783163/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCt < 2:6663186/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTg > 2:1213817/1‑101 (MQ=255)
ggCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCaaa > 2:3937816/1‑101 (MQ=255)
gCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAAc < 2:3035281/101‑1 (MQ=255)
gTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACgg > 2:470439/1‑101 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa < 2:2487973/101‑1 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa < 2:6506740/101‑1 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa > 1:4476913/1‑101 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa > 2:4091292/1‑101 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa < 2:1831479/101‑1 (MQ=255)
gATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaaa > 1:557819/1‑101 (MQ=255)
acaaaacgctCTGCCTGTCGTGGCGG.G.GAAGTGGGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAg < 2:1640120/92‑1 (MQ=21)
cGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTc < 1:3937991/101‑1 (MQ=255)
aaaCATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTg < 1:356010/101‑1 (MQ=255)
aaaCATCTCCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTg < 1:3062298/101‑1 (MQ=255)
aaCATCTGCATGTAGGCGGGG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgt < 1:1107614/101‑1 (MQ=255)
aCATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtc < 2:4609199/101‑1 (MQ=255)
cATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcg > 1:6370234/1‑101 (MQ=255)
tCTGCATGGAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcgtc < 1:1838428/101‑1 (MQ=255)
cTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcgtcc > 1:1668764/1‑100 (MQ=255)
tGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGc > 2:5899082/1‑101 (MQ=255)
tGCATGTAGGCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGc < 2:4830589/101‑1 (MQ=255)
gCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCt > 1:3228292/1‑101 (MQ=255)
cATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTc < 2:3992258/101‑1 (MQ=255)
aTGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcc > 1:6720632/1‑101 (MQ=255)
aTGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcc < 1:7010128/101‑1 (MQ=255)
gTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcccc > 1:2189865/1‑101 (MQ=255)
aGTCGGCT.G.GAAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcccccc < 1:4659912/101‑1 (MQ=255)
aGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcccccc < 2:4557053/101‑1 (MQ=255)
aGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcccccc > 2:6751660/1‑101 (MQ=255)
|
CCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG.G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCC > NC_014034/1395575‑1395775
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|