BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,397,490	T→G	12.3%	C458G (TGC→GGC)	RCAP_rcc01307 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,397,490	0	T→G	12.3%	128.4 0.0 ‑1.7	426	C458G (TGC→GGC)	RCAP_rcc01307	hypothetical protein
Reads supporting (aligned to +/- strand): new base (29/23): ref base (209/163): total (240/186)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.07e-02

Only 100 of 450 total aligned reads displayed.


GGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTGG  >  NC_014034/1397390‑1397590


 gATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTg                                                                                                        >  2:86262/1‑101 (MQ=255)


 gATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTg                                                                                                        >  1:2667736/1‑101 (MQ=255)


  aTCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGc                                                                                                       <  2:6636854/101‑1 (MQ=255)


  aTCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGc                                                                                                       <  2:2372716/101‑1 (MQ=255)


    cGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcac                                                                                                     >  2:4326089/1‑101 (MQ=255)


     gAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcacc                                                                                                    <  2:1349040/101‑1 (MQ=255)


     gAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcacc                                                                                                    <  2:1201697/101‑1 (MQ=255)


     gAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcacc                                                                                                    >  1:4837939/1‑101 (MQ=255)


     caaaCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcacc                                                                                                    <  2:3934752/100‑1 (MQ=255)


      taaCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcacca                                                                                                   <  1:5992710/100‑1 (MQ=255)


      aaaCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcaccc                                                                                                   >  2:3771384/1‑100 (MQ=255)


      aaaCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcacca                                                                                                   >  1:6134826/1‑101 (MQ=255)


      aaaCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcacca                                                                                                   >  1:7033111/1‑101 (MQ=255)


      aaaCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcacca                                                                                                   >  2:2405396/1‑101 (MQ=255)


          tctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCg...g                                                                                            >  1:6448267/1‑101 (MQ=255)


          tctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACAACCg...g                                                                                            >  2:3343179/1‑101 (MQ=255)


           ctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCg...gc                                                                                           >  2:773595/1‑100 (MQ=255)


           ctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCg...gc                                                                                           >  2:4157304/1‑100 (MQ=255)


           ctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...Gt                                                                                           >  2:3206767/1‑101 (MQ=255)


            ttCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTc                                                                                          >  1:5143153/1‑101 (MQ=255)


            ttCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTc                                                                                          >  1:2866665/1‑101 (MQ=255)


            ttCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCGGCACCACCG...GTc                                                                                          <  1:6356429/101‑1 (MQ=255)


              cAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGc                                                                                        >  2:1140941/1‑101 (MQ=255)


               aaTGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCt                                                                                       >  1:6825502/1‑101 (MQ=255)


               aaTGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCt                                                                                       >  1:2586339/1‑101 (MQ=255)


               aaTGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCt                                                                                       >  1:3088818/1‑101 (MQ=255)


                  ggATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTccc                                                                                    >  1:1454355/1‑101 (MQ=255)


                   gATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTcccc                                                                                   >  1:4653416/1‑101 (MQ=255)


                    atatGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTccccc                                                                                  >  2:6976322/1‑101 (MQ=255)


                    atatGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTccccc                                                                                  <  2:7051313/101‑1 (MQ=255)


                      atGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTccccccc                                                                                >  2:6011232/1‑100 (MQ=255)


                      atGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCcg                                                                                >  2:5586398/1‑101 (MQ=255)


                        ggCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCcgcg                                                                              >  1:392166/1‑101 (MQ=255)


                        ggCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCcgcg                                                                              >  2:6189451/1‑101 (MQ=255)


                        ggCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCcgcg                                                                              >  2:4870127/1‑101 (MQ=255)


                         gCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCgg                                                                             <  2:1572025/101‑1 (MQ=255)


                          cAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCggg                                                                            >  1:589151/1‑101 (MQ=255)


                           aaaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCgggg                                                                           >  1:1242215/1‑101 (MQ=255)


                           aaaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCgggg                                                                           >  1:4160891/1‑101 (MQ=255)


                             aaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGc                                                                         <  1:10128/101‑1 (MQ=255)


                                 gTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTgg                                                                     >  1:210091/1‑101 (MQ=255)


                                       gACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                               <  2:1912911/101‑1 (MQ=255)


                                       gACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                               >  1:5684429/1‑101 (MQ=255)


                                       accgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC....GTCGCTCCCCCCGCGGGGGCGGGGAtag                                                                 >  2:2979050/6‑99 (MQ=0)


                                         cATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAaac                                                             >  2:5789607/1‑101 (MQ=255)


                                          aTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAaaca                                                            >  1:5486/1‑101 (MQ=255)


                                             tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.TGCGC.GCCATGAAT.TCATCGAGCACCATCGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAaaca                                                            >  2:1753864/1‑101 (MQ=2)


                                              cGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC....GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggt                                                          >  1:691144/1‑98 (MQ=2)


                                              cGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC....GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggt                                                          >  2:3086701/1‑98 (MQ=2)


                                              cGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAccc                                                        >  2:2790389/1‑101 (MQ=255)


                                               gCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCg                                                       <  2:3836919/101‑1 (MQ=255)


                                                  ccccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC....GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtcc                                                      <  2:4003728/101‑8 (MQ=2)


                                                  ccccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC....GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtcc                                                      <  1:162487/101‑8 (MQ=2)


                                                  ccccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGAta                                                    >  1:1757020/1‑100 (MQ=255)


                                                   cccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC....GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtcca                                                     <  2:4452985/101‑9 (MQ=2)


                                                   cccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC....GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtcca                                                     <  2:3537101/101‑9 (MQ=2)


                                                   cccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC....GTCGCTCCCCCCGCGGGAGCGTGGATCGAaacggtgtcca                                                     >  1:327743/1‑93 (MQ=2)


                                                    ccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCAt                                                  <  2:5498063/101‑1 (MQ=255)


                                                    ccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCAt                                                  <  1:1796691/101‑1 (MQ=255)


                                                     cccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC....GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtccagc                                                   <  1:3528053/101‑11 (MQ=2)


                                                       cgcgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGc                                               >  2:5416083/1‑101 (MQ=255)


                                                         cgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGccc                                             >  2:5341879/1‑101 (MQ=255)


                                                         cgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGccc                                             <  2:2026408/101‑1 (MQ=255)


                                                         cgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGccc                                             >  1:876238/1‑101 (MQ=255)


                                                         cgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGccc                                             <  2:4558488/101‑1 (MQ=255)


                                                            gggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGcc                                          <  2:5973292/101‑1 (MQ=255)


                                                            gggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGcc                                          >  1:4711007/1‑101 (MQ=255)


                                                             ggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGcgt                                         >  1:1536991/1‑99 (MQ=255)


                                                             ggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCt                                         <  2:4646524/101‑1 (MQ=255)


                                                              gCGTGGATCGAAACCCCG.TCCTC.ACCACGCAA.CCCCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTc                                        <  1:435121/101‑1 (MQ=255)


                                                              gCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTc                                        >  2:2194936/1‑101 (MQ=255)


                                                               cGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCa                                       >  1:1160417/1‑101 (MQ=255)


                                                                   gATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAgcgc                                   >  2:6249996/1‑101 (MQ=255)


                                                                    aTCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGcgcc                                  <  1:6639031/101‑1 (MQ=255)


                                                                      cGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGCTCATGGCCCGCCTCAGcgccgc                                >  1:3978364/1‑101 (MQ=255)


                                                                         aaCACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCt                             >  2:2905658/1‑101 (MQ=255)


                                                                         aaCACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCt                             >  1:4920649/1‑101 (MQ=255)


                                                                          acacCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTg                            >  2:6755907/1‑101 (MQ=255)


                                                                          acacCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTg                            <  2:6381641/101‑1 (MQ=255)


                                                                           ccccG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGa                           <  1:537138/99‑1 (MQ=255)


                                                                              cG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGt                        <  1:729345/101‑1 (MQ=255)


                                                                              cG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGt                        <  1:2470117/101‑1 (MQ=255)


                                                                                  catc.aCCACGCAC.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGc                     >  1:5078247/1‑101 (MQ=255)


                                                                                  catc.aCCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGc                     >  1:989294/1‑101 (MQ=255)


                                                                                   atc.aCCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTAGCt                    >  2:2267810/1‑101 (MQ=255)


                                                                                     c.accacGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTcc                  <  2:2586243/101‑1 (MQ=255)


                                                                                      ccccacGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTcc                  <  2:508273/99‑1 (MQ=255)


                                                                                       cccccGCAA.CCGCCCTGCCCCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTccc                 <  2:4802018/97‑1 (MQ=255)


                                                                                         cacGCAA.CCGCCCTGCACCCCCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTccccc               <  1:3309724/101‑1 (MQ=255)


                                                                                          acGCAA.CCGCCCTGCCCCGCCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTcccccc              <  1:2264302/101‑1 (MQ=255)


                                                                                           cGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCcg             <  2:40629/101‑1 (MQ=255)


                                                                                            gCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCcgc            >  1:3699672/1‑101 (MQ=255)


                                                                                             gccgccGCCCGGCCCCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCcgc            <  2:4212504/97‑1 (MQ=255)


                                                                                             cAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCcgcg           <  2:6447937/101‑1 (MQ=255)


                                                                                              aa.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCgg          >  1:3612383/1‑101 (MQ=255)


                                                                                              aa.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCCCgg          >  1:2018806/1‑101 (MQ=255)


                                                                                                   gCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGc      >  1:5577792/1‑101 (MQ=255)


                                                                                                   gCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGc      >  2:5287233/1‑101 (MQ=255)


                                                                                                    cccTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCg     <  1:3472755/101‑1 (MQ=255)


                                                                                                      cTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTg   >  1:6234705/1‑101 (MQ=255)


GGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCG...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTGG  >  NC_014034/1397390‑1397590

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG