Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,640,210 T→G 16.7% intergenic (‑186/+90) thrS ← / ← RCAP_rcc02462 threonyl‑tRNA synthetase/hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,640,2100T→G16.7% 159.3 ‑0.6 ‑0.2340intergenic (‑186/+90)thrS/RCAP_rcc02462threonyl‑tRNA synthetase/hypothetical protein
Reads supporting (aligned to +/- strand):  new base (34/23):  ref base (155/128):  total (189/151)
Fisher's exact test strand distribution p-value = 5.60e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.16e-01

Only 100 of 361 total aligned reads displayed.

CAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.G.CTTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGAACCGGA  >  NC_014034/2640110‑2640310
                                                                                                        |                                                                                                    
cAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGCGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCAt                                                                                                      <  1:3406392/101‑1 (MQ=21)
 aacgggggCGCTTTTACGCAGGCAAAAGGGGGGCGCTGCCGCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTAGAGCAAGATG.AAAGACCATg                                                                                                     >  1:6853730/7‑101 (MQ=18)
 aaCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCAta                                                                                                     <  2:4084382/101‑2 (MQ=21)
    cGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGt                                                                                                  <  1:2840868/101‑1 (MQ=25)
     gTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGtt                                                                                                 <  1:1689096/101‑1 (MQ=21)
     gTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCCC.TT.G.GCCTTCGGCCCATTCACCCCCCGAGGGATTTTGAGCAAGATG.AAAGACCATggggt                                                                                                 >  2:911040/1‑99 (MQ=21)
      tGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc                                                                                                <  1:5899415/101‑1 (MQ=25)
        gcgtTTGTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTTT.G.T.CTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCAt                                                                                              <  1:3866541/101‑1 (MQ=21)
        gcgcTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCAt                                                                                              <  1:3255382/101‑1 (MQ=21)
          gcTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCt                                                                                            <  1:2331830/101‑1 (MQ=25)
                 cgcAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTTCCCCCCCGAGGGATTTGGAGCAAGATG.AAAGACCATGGGTTCCTCTTGCCTcc                                                                                     >  2:5841859/1‑100 (MQ=21)
                   gccccgaaaAGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCCCCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAat                                                                                  <  1:1244791/95‑1 (MQ=9)
                   cAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCaaa                                                                                   <  1:4100142/101‑1 (MQ=21)
                     cccgaaaAGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAatat                                                                                <  2:5057407/97‑1 (MQ=17)
                      gCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAatat                                                                                >  1:1892074/1‑101 (MQ=21)
                      gCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAatat                                                                                <  1:7128856/101‑1 (MQ=21)
                      gCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAatat                                                                                >  2:2837541/1‑101 (MQ=21)
                       cgaaaAGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATcc                                                                              >  1:835644/3‑101 (MQ=17)
                       cAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTTCCTCaacaatc                                                                               >  2:4820428/1‑96 (MQ=18)
                       cAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATACACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATc                                                                               >  1:437305/1‑101 (MQ=21)
                        gaaaAGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATccc                                                                             <  2:1377202/100‑1 (MQ=17)
                        gaaaAGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATccc                                                                             >  2:3537200/2‑101 (MQ=17)
                        aaaaGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATcc                                                                              <  1:6997950/101‑1 (MQ=25)
                         aaaGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATccc                                                                             <  2:6771237/101‑1 (MQ=25)
                         aaaGGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATccc                                                                             >  1:2109252/1‑101 (MQ=21)
                         aaaAGGGGGCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg                                                                            >  2:6220702/1‑101 (MQ=17)
                          aaagggggCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgg                                                                           >  2:1974105/4‑101 (MQ=17)
                          aaagggggCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgg                                                                           >  2:5647525/4‑101 (MQ=17)
                          aaagggggCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgg                                                                           <  2:3904991/98‑1 (MQ=18)
                            ggggggCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg                                                                          >  1:4425812/1‑101 (MQ=21)
                            ggggggCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCcgg                                                                          >  1:75100/1‑101 (MQ=21)
                              ggggCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGAGAAAGGA..TGGGGCTTATCTTGCCCCAAATATCCCgggggt                                                                       >  2:1039587/1‑100 (MQ=18)
                               gggCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggggg                                                                       >  1:6383273/1‑101 (MQ=25)
                                ggCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtga                                                                     <  1:603994/101‑4 (MQ=21)
                                ggCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtga                                                                     >  1:6548651/1‑98 (MQ=21)
                                ggCGCTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtga                                                                     <  2:2410834/101‑4 (MQ=21)
                                 gcgcTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAg                                                                     <  2:2941995/101‑1 (MQ=25)
                                   gcTGCCCCCCTC.TTGG.G.CTTCGGCCAATTCAGCCCCGGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTc                                                                   <  1:6315489/101‑1 (MQ=25)
                                   gcTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggc                                                                  <  2:797736/101‑7 (MQ=21)
                                   gcTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggc                                                                  >  1:519870/1‑95 (MQ=21)
                                   gcTGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTc                                                                   <  1:4051091/101‑1 (MQ=25)
                                     tGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCt                                                                 <  1:2035131/101‑1 (MQ=25)
                                     tGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCt                                                                 <  2:3236123/101‑1 (MQ=25)
                                     tGCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCt                                                                 <  1:3548698/101‑1 (MQ=25)
                                      gCCCCCCTC.TT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTg                                                                >  2:5460582/1‑101 (MQ=25)
                                       ccccccTC.TT.GTC.CTTCGGCCAATTCACCCCCCGAGTTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGTGAGTCCTGa                                                               <  1:1321150/101‑1 (MQ=21)
                                        cccccTC.TT.G.GCCTTCGGCCAATTCTCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa                                                              <  2:5794008/101‑1 (MQ=37)
                                             tc.tT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAc                                                         >  2:2725146/1‑101 (MQ=37)
                                             tc.tT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATCTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAc                                                         <  1:883045/101‑1 (MQ=37)
                                                  ttggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgg                                                       >  2:5294920/6‑101 (MQ=37)
                                                          cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga                                               >  2:257496/1‑101 (MQ=255)
                                                          cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga                                               >  2:6643146/1‑101 (MQ=37)
                                                             ccAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGTGGGCAGAGcc                                            <  2:472382/101‑1 (MQ=37)
                                                               aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc                                          >  2:1616257/1‑101 (MQ=37)
                                                               aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc                                          >  1:2701572/1‑101 (MQ=255)
                                                               aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc                                          >  1:3144712/1‑101 (MQ=255)
                                                                aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc                                         >  1:5547709/1‑101 (MQ=37)
                                                                 ttCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc                                        <  1:4140203/101‑1 (MQ=255)
                                                                 ttCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc                                        >  1:4943102/1‑101 (MQ=25)
                                                                  tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt                                       >  1:5307738/4‑101 (MQ=255)
                                                                  tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt                                       >  2:6000430/4‑101 (MQ=25)
                                                                  tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt                                       >  1:1151113/4‑101 (MQ=25)
                                                                     ccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc                                    >  1:678605/1‑101 (MQ=255)
                                                                     ccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc                                    <  2:5907108/101‑1 (MQ=255)
                                                                       ccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCgg                                  >  1:5371678/1‑101 (MQ=255)
                                                                          cGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTc                               >  2:7044362/1‑101 (MQ=255)
                                                                           gAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt                              <  1:3634379/101‑1 (MQ=255)
                                                                             ggTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCttt                            >  1:4821543/1‑101 (MQ=255)
                                                                              gTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtc                           >  1:5484814/1‑101 (MQ=255)
                                                                               tATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtct                          >  2:6318423/1‑101 (MQ=255)
                                                                               tATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtct                          >  2:6047102/1‑101 (MQ=255)
                                                                               tATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtct                          <  1:6242969/101‑1 (MQ=255)
                                                                                aTTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc                         >  1:3505988/1‑101 (MQ=255)
                                                                                 tttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCa                        <  2:5228712/101‑1 (MQ=255)
                                                                                 tttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGCAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGACTTTCTCa                        >  2:4928308/1‑101 (MQ=37)
                                                                                  ttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCaa                       <  2:4364881/101‑1 (MQ=255)
                                                                                      agcAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGt                   <  1:6659155/99‑1 (MQ=255)
                                                                                      agcAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGt                   >  2:1213591/3‑101 (MQ=255)
                                                                                       gcAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGtt                  <  2:1945525/100‑1 (MQ=255)
                                                                                        cAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTc                 >  2:6189751/1‑101 (MQ=255)
                                                                                        cAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTc                 <  2:1173193/101‑1 (MQ=255)
                                                                                         aaGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTcc                >  2:5530216/1‑101 (MQ=255)
                                                                                         aaGATG.AAAGACCATGGGTTCATCTTACCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTcc                <  1:2806943/101‑1 (MQ=255)
                                                                                            gatgaaaGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCgg              >  2:5678498/5‑101 (MQ=255)
                                                                                             atgaaaGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGc             <  2:1792560/98‑1 (MQ=255)
                                                                                              tgaaaGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCt            >  2:6827129/3‑101 (MQ=255)
                                                                                               gaaaGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTc           >  2:4265455/2‑101 (MQ=255)
                                                                                                aaaGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGTCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCa          >  2:3153712/1‑101 (MQ=255)
                                                                                                aaaGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCa          >  2:6533495/1‑101 (MQ=255)
                                                                                                aaaGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCa          <  2:6382949/101‑1 (MQ=255)
                                                                                                aaaGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCa          >  1:5439400/1‑101 (MQ=255)
                                                                                                 aaGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAg         >  1:2971495/1‑101 (MQ=255)
                                                                                                   gcccAGGGTTTCTTCTGCCCACAAATACCCGGGGGGGAGCCCGAAAGGGGGGGGGGGCAGCCCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGaa       <  2:3427548/99‑1 (MQ=255)
                                                                                                   gACCATGGGTTCATCTTGCCTCAAATATCGCGGGGGGAGTCCTG.AAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGAAc      <  1:1528572/101‑1 (MQ=255)
                                                                                                   gACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGaa       <  1:5656984/101‑1 (MQ=255)
                                                                                                    aCCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGAAc      >  2:4610378/1‑101 (MQ=255)
                                                                                                      cATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGAACCg    <  2:2076860/101‑1 (MQ=255)
                                                                                                       aTGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGAACCgg   >  1:5753393/1‑101 (MQ=255)
                                                                                                        tGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGAACCGGa  <  2:3698019/101‑1 (MQ=255)
                                                                                                        tGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGAACCGGa  <  1:100445/101‑1 (MQ=255)
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CAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.G.CTTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCGGCTCAGAACCGGA  >  NC_014034/2640110‑2640310

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG