Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 3,068,157 | T→C | 1.9% | intergenic (‑140/+152) | glcD ← / ← RCAP_rcc02872 | glycolate dehydrogenase, subunit GlcD/hypothetical protein |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 3,068,157 | 0 | T→C | 1.9% | 3.0 ‑1.1 ‑1.0 | 265 | intergenic (‑140/+152) | glcD/RCAP_rcc02872 | glycolate dehydrogenase, subunit GlcD/hypothetical protein |
Reads supporting (aligned to +/- strand): new base (5/0): ref base (179/81): total (184/81) | ||||||||||
Fisher's exact test strand distribution p-value = 3.27e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.27e-02 |
Only 100 of 327 total aligned reads displayed.
TTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGG > NC_014034/3068057‑3068256
|
ttGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCt > 2:106638/1‑101 (MQ=255)
tGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTc > 1:5552190/1‑101 (MQ=255)
tGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTc < 2:3775440/101‑1 (MQ=255)
gCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCg > 1:4518509/1‑101 (MQ=255)
gCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCg < 1:3659580/101‑1 (MQ=255)
cGGATGCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCgg > 1:6863081/1‑101 (MQ=255)
gATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGcc < 2:3335890/101‑1 (MQ=255)
gcgcAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.Agcgc < 1:5816916/101‑1 (MQ=255)
gcAACCGAAACGCTGGGCAGGCTGACCGAGGCCGTCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGcgccc > 1:6369186/1‑101 (MQ=255)
gcAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGcgccc > 1:4930113/1‑101 (MQ=255)
gcAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGcgccc < 2:869260/101‑1 (MQ=255)
aaCCGAAACGATGGGCAGGCTGATCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGcgcccgc < 2:4451168/101‑1 (MQ=255)
aaCCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGcgcccgc > 1:4827126/1‑101 (MQ=255)
aaCCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGcgcccgc > 2:276435/1‑101 (MQ=255)
ccGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCgcccgccc < 1:4664044/101‑1 (MQ=255)
ccGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCgcccgccc > 1:6814138/1‑101 (MQ=255)
cGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.Agatcggaagag > 1:4119605/1‑91 (MQ=255)
cGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGcccgcccc < 2:4825336/101‑1 (MQ=255)
aaaCGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGcccgccccgc > 2:4524151/1‑101 (MQ=255)
aaCGATGGGCGGGCTGACGGAGCCCATCGCCGAGCTCATGCGGAACAGGGGCCTGGTGCCCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCccgccccgcc < 2:2208005/101‑1 (MQ=18)
aaCGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCccgccccgcc > 2:6897020/1‑101 (MQ=255)
aaCGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCccgccccgcc > 1:2838325/1‑101 (MQ=255)
aCGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCcgccccgccc < 2:5875479/101‑1 (MQ=255)
gATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCAt > 1:3456734/1‑101 (MQ=255)
gATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCAt < 1:1204179/101‑1 (MQ=255)
gATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCAt < 1:934988/101‑1 (MQ=255)
aTGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCCTg > 2:339750/1‑101 (MQ=255)
aTGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATg < 1:6522147/101‑1 (MQ=255)
aTGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATg > 2:5736495/1‑101 (MQ=255)
gggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATggc < 1:2589144/101‑1 (MQ=255)
gggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATggc > 1:5384933/1‑101 (MQ=255)
gggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATggc > 1:5693396/1‑101 (MQ=255)
gggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATggc < 2:2342144/101‑1 (MQ=255)
gCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATggcgg > 1:375218/1‑101 (MQ=255)
aGGCTGGCCGAGGCCATCGCCGAGGTCATGCGAAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATggcgggc < 2:165427/101‑1 (MQ=255)
aGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATggcgggc < 2:5312108/101‑1 (MQ=255)
aGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATggcgggc > 2:4661523/1‑101 (MQ=255)
aGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATggcgggc > 1:6284308/1‑101 (MQ=255)
ggCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATggcgggcg > 1:2302282/1‑101 (MQ=255)
gCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGgcg.c > 1:5942689/1‑101 (MQ=255)
gCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGGGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGgcg.c < 1:334386/101‑1 (MQ=255)
cTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.Ct < 2:5593113/101‑1 (MQ=255)
tGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCTCCCCGCCCTTGGCGGgcg.cct > 1:7061410/1‑99 (MQ=255)
tGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGgcg.cct > 2:1051680/1‑99 (MQ=255)
tGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.Ctt < 2:735987/101‑1 (MQ=255)
gACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTtc < 2:3971667/101‑1 (MQ=255)
gACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTtc < 1:2654940/101‑1 (MQ=255)
ccGAGGCCATCCCCGAGGTCATGCGGAACAGTGGCCTCGTGCCCGCCGAGGGCCCAAA.GGCCCTCGGCC.GGCGCCCGCCCCGCCCATGGCGGGCG.CTtctc < 1:2379142/101‑1 (MQ=255)
cGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTtctcc > 1:3099825/1‑100 (MQ=255)
cGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTcg < 2:1283349/101‑1 (MQ=255)
aGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTcgcc < 2:6426821/101‑1 (MQ=255)
ggCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTcgccc < 2:2380221/101‑1 (MQ=255)
cGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGGG.CTTCTCGCCCCCCcgg > 2:2400206/1‑101 (MQ=255)
gCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCgggg > 1:1790574/1‑101 (MQ=255)
ccGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGgggc < 2:5900992/101‑1 (MQ=255)
cGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGgggcg < 2:6571944/101‑1 (MQ=255)
cGAGGTCATGCGGAACAGTGGCCTCGTGACCACCGAGGGCCCAAA.GGCCATCGGAC.AGCGCCCGCCCCGCCCATGGCGGGGG.CATATCGCCCCCCagggag > 2:3031153/1‑99 (MQ=17)
gAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGgggcgg > 1:5466047/1‑101 (MQ=255)
gTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GTCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGggcgggcg > 2:3458825/1‑101 (MQ=255)
gTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCCGggcgggcg > 2:1507709/1‑101 (MQ=255)
cATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCCCCCGGGCGGGGGcc > 2:3842292/1‑101 (MQ=255)
aTGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCCCCCATGGCGGGCG.CTTCTCCCCCGCCgggcccgggagcg > 2:6369294/1‑91 (MQ=17)
aTGCGGAACAGTGGCCTCGTAACCGGCGACGGGCCAAA.GGCCCTCGAAC.AGCGCCCCCCCCGCCCCTGCCGGGGG.CACGTCGCCCCGCCCGGCGGGCGGCg > 2:4277895/1‑101 (MQ=255)
cggTGGCCTGGGGCCCGCCGGGGGCCCAAG.GCCCCCCGGCC.GGCCCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTctgc < 2:4029572/99‑1 (MQ=11)
cAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTctgc > 1:6103633/1‑101 (MQ=255)
ggTGCCCTCGTGCCCGCCGGGGGCCCAAG.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTctgct < 1:4216600/100‑1 (MQ=14)
gTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGGGCCCGCCCccgctc > 2:6089498/1‑100 (MQ=14)
ggCCCCGGGACCGCCGGGGCGCCAAA.GCGTCCCGGCC.AGCGCCCGCCCCGCCCCTGGCGGGCG.GTTATCGCCCGCCGGGCCGGGCGCCGGGCCccgctggc > 1:618426/1‑99 (MQ=11)
cgcggcgccgccgGGGGCCCAAG.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCt < 2:5197263/94‑1 (MQ=11)
cTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCCCCGCCGCGccc > 1:1492076/1‑100 (MQ=255)
cTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGCGGCCGGCCCCTGCTGCGccc > 1:5621943/1‑100 (MQ=255)
cGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCCGCGCCT.gg > 1:2402633/1‑101 (MQ=255)
gggcccgcggAGGGCCAAAG.GGCCCTCGCCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.ggg < 1:1616053/97‑1 (MQ=14)
agacccgccg.GGGCCCAAA.GGCCCCCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CCTCTCCCCCGCCGGGGCCGGCCCCCGCCCCTGCCCCGCCttacg > 1:817200/5‑97 (MQ=11)
ggcccgccgAGGGCCCAAC.GCCCCTCGCCC.GGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.gggg < 2:5531164/98‑1 (MQ=14)
ggACCGCGGGGGGCCAAAG.GCCCCTCGGCG.AGCCCCCGCCCCACCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.gggg < 2:2645734/100‑1 (MQ=14)
gACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCC.ggggg > 2:4247087/1‑100 (MQ=255)
gACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCCGCTGCGCCC.GGGGa > 1:6973481/1‑101 (MQ=255)
gACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCCGGGCGGGCGCCGGCCTCTGCTGCGCCT.ggggg > 2:6286538/1‑100 (MQ=255)
cccgccgGGGGCCCAAG.GGCCCCCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGaa < 2:4358011/100‑1 (MQ=255)
ccgccgAGGGCCAAAG.GGCCCCCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGaaa < 1:6655321/101‑1 (MQ=255)
cgccgGGGCCCGAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAAc < 2:7118184/101‑1 (MQ=255)
gccgGGGGCCCAAA.GGCCCTCGGCC.TGCGCCCGCCCCGCCATCGGCGGGGGCCGTCGCGGCGCCCGGGCAGGGGGCCGGGCGCCGCTGTGCCT.cgggggag > 1:4575431/1‑97 (MQ=2)
gccgAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGGGCCGGCCCCCGCTGCGCCC.gggggcacg > 2:6825239/1‑96 (MQ=14)
ccgAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCCCTGCTGCGCCT.GGGGGAACgg > 1:1027589/1‑101 (MQ=255)
cgAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCC.GGGGGAACggg > 2:5073501/1‑100 (MQ=255)
ggggCCCAAG.GGCCCGCGCCC.GGCGCCCCCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCt < 2:1927966/100‑1 (MQ=17)
gggCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCtt > 2:3603584/1‑101 (MQ=255)
ggCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCC.GGGGCAACGGGCTTg > 1:2200282/1‑101 (MQ=255)
cccAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGc > 1:1925563/1‑101 (MQ=255)
ccAAAGGGCCCCCGGCC.GGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGc < 2:6144941/101‑1 (MQ=18)
cacggCCCCCGGCCGGGCCCCCGCCCCGCCCCTGGCGGGCG.CTTCTCGCCCGCCGGGCGGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTgcac < 2:2052040/98‑4 (MQ=11)
agggCCCTCGGCG.AGCCCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCg < 2:4013462/99‑1 (MQ=255)
a.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGGCCCTGCTGCGCCT.GGGGAAACGGGCTTGGCACCGc > 1:5159385/1‑101 (MQ=255)
a.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCCTGGCACCGc > 2:1896524/1‑101 (MQ=255)
a.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGGCTTGGCACCGc > 1:5202334/1‑101 (MQ=255)
ggCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCCCTGCTGCGCCC.GGGGAAACGGGCTTGGCACCGcc > 2:6993727/1‑101 (MQ=255)
ggCCCCCGCCC.CGCGCCCTCCCCGCCCAGGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGAGCCT.GGGGAAACGGTCTTGGCACCGcc < 1:1392462/101‑1 (MQ=17)
ccccGCGGCC.AGCGCCCGCCCCGCCCAGGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGccc < 2:1194391/100‑1 (MQ=255)
cTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCcgg > 2:2995587/1‑101 (MQ=255)
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TTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAA.GGCCCTCGGCC.AGCGCCCGCCCCGCCCATGGCGGGCG.CTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGG > NC_014034/3068057‑3068256
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|