BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	3,068,178	C→A	2.0%	intergenic (‑161/+131)	glcD ← / ← RCAP_rcc02872	glycolate dehydrogenase, subunit GlcD/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	3,068,178	0	C→A	2.0%	2.5 ‑1.8 ‑0.0	250	intergenic (‑161/+131)	glcD/RCAP_rcc02872	glycolate dehydrogenase, subunit GlcD/hypothetical protein
Reads supporting (aligned to +/- strand): new base (5/0): ref base (153/91): total (159/91)
Fisher's exact test strand distribution p-value = 1.62e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.84e-01

Only 100 of 315 total aligned reads displayed.


ACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGAAAGGCA  >  NC_014034/3068078‑3068278


aCGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCcgccccgccc                                                                                                         <  1:6998151/101‑1 (MQ=255)


 cGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCa                                                                                                        >  2:6100716/1‑101 (MQ=255)


  gATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCAt                                                                                                       <  1:1204179/101‑1 (MQ=255)


  gATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCAt                                                                                                       <  1:934988/101‑1 (MQ=255)


  gATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCAt                                                                                                       >  2:6422150/1‑101 (MQ=255)


   aTGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATg                                                                                                      >  2:1631865/1‑101 (MQ=255)


   aTGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATg                                                                                                      <  2:566751/101‑1 (MQ=255)


     gggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATggc                                                                                                    <  2:4785860/101‑1 (MQ=255)


     gggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATggc                                                                                                    >  1:3010124/1‑101 (MQ=255)


     gggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATggc                                                                                                    >  1:5384933/1‑101 (MQ=255)


     gggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATggc                                                                                                    >  1:5693396/1‑101 (MQ=255)


      ggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATggcg                                                                                                   <  2:1756470/101‑1 (MQ=255)


       gCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATggcgg                                                                                                  >  1:375218/1‑101 (MQ=255)


         aGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATggcgggg                                                                                                >  1:4985546/1‑100 (MQ=255)


         aGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATggcgggc                                                                                                >  2:4661523/1‑101 (MQ=255)


         aGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATggcgggc                                                                                                <  2:5312108/101‑1 (MQ=255)


          ggCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATcgcgggcg                                                                                               >  2:3020901/1‑101 (MQ=255)


             tGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.Ct.t                                                                                          <  2:735987/101‑1 (MQ=255)


               aCCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.tct                                                                                        <  2:7062348/101‑1 (MQ=255)


                ccGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGGG.CC.tctc                                                                                       >  2:2639815/1‑101 (MQ=255)


                ccGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.tctc                                                                                       <  1:3389793/101‑1 (MQ=255)


                  gAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGGG.CT.TCTcgc                                                                                     >  2:5279342/1‑101 (MQ=255)


                   aGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTcgcc                                                                                    >  2:4252239/1‑101 (MQ=255)


                    ggCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTcgccc                                                                                   <  2:4505439/101‑1 (MQ=255)


                    ggCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTcgccc                                                                                   <  2:2380221/101‑1 (MQ=255)


                     gCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTcgcccc                                                                                  >  1:4181283/1‑100 (MQ=255)


                      ccATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTcgcccgc                                                                                 <  2:2142910/101‑1 (MQ=255)


                         tCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCgg                                                                              <  2:6355028/101‑1 (MQ=255)


                          cGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGGG.CT.TCTCGCCCCCCcgg                                                                             >  2:2400206/1‑101 (MQ=255)


                            ccGAGGTCATGCGGAACAGTGCCCTCGTGCCCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGgggc                                                                           <  2:6883215/101‑1 (MQ=255)


                             cGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCGCAAAGGCCCTCGGCGAGCGCCCGCCCCGCCCATGGCGGGCG.CC.TCTcgcccgcgcgcgcg                                                                          >  1:2320545/1‑94 (MQ=17)


                             cGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGgggcg                                                                          >  1:5908862/1‑101 (MQ=255)


                              gAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGgggcgg                                                                         >  2:3448867/1‑101 (MQ=255)


                               gggTCAGGCGGACCAGGGCCCCCGGGCCCGCCGAGGCCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGgggcggg                                                                        <  1:6931261/100‑1 (MQ=11)


                                   cATGCGGAACAGTGGCCTCGTGCCCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGcc                                                                    <  2:387975/101‑1 (MQ=255)


                                   cATGCGGAACAGTGGCCTCCTCACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGGGcc                                                                    <  1:6831288/101‑1 (MQ=255)


                                    aTGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGGGCCg                                                                   >  2:3997284/1‑101 (MQ=255)


                                    aTGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGGGCCg                                                                   >  2:887945/1‑101 (MQ=255)


                                    aTGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCg                                                                   <  2:5896562/101‑1 (MQ=255)


                                      gCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGGGCCCGc                                                                 >  1:2594728/1‑101 (MQ=255)


                                        ggAACAGGGCCCTCGTGCCCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCct                                                               <  1:2392341/101‑1 (MQ=255)


                                         gAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CC.TCTCGCCCGCCGGGGCGGGCGCCGGcccc                                                              >  2:6169153/1‑99 (MQ=255)


                                          aaCAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGGG.CT.TCTCGCCCGCCGGGGCGGGCGCCgggccct                                                             >  1:6464078/1‑96 (MQ=255)


                                            cAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTctgc                                                           >  1:6103633/1‑101 (MQ=255)


                                            cAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCCGGGCGGGGGcccggccccgc                                                           >  1:742852/1‑92 (MQ=17)


                                            cAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCCCCCGCCGGGGCGGGCGCCGGCCTctgc                                                           >  2:4327636/1‑101 (MQ=255)


                                            cAGTGCCCTCGTGCCCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTccgc                                                           <  1:1378865/101‑1 (MQ=255)


                                             aatGGCCCCGTGACCGGCGAGGGCCCAAAGGCCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGCCG.TGGCGCCCCCCGGGGGGGGGGGCGGccccccg                                                           >  1:1781749/3‑96 (MQ=17)


                                             aatGGCCCCGTGACCGGCGAGGGCCCAAAGGCCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGG.CTGTGGCGCCCCCCGGGGGGGGGGGCgggccccgg                                                           >  2:106394/3‑94 (MQ=17)


                                             aGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGGGGCGGCCCccgct                                                          >  1:6315245/1‑101 (MQ=14)


                                               tGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCtgctgc                                                        >  2:3379585/1‑101 (MQ=255)


                                                ggCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGGGCCGGGCCCTGCTgcg                                                       >  2:115954/1‑101 (MQ=255)


                                                ggCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCCGGGCGGGCGCCGGCCCCCGCTccg                                                       >  1:1491831/1‑101 (MQ=14)


                                                 gCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCCGCCCCTGCTgcgc                                                      >  1:5460333/1‑101 (MQ=255)


                                                   cccgggcccgccgGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCt                                                    <  1:6143391/94‑1 (MQ=255)


                                                    caagacccgccg.GGGCCCAAAGGCCCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGGG.CT.TCTCGCCCGCCGGGCCGGGCGCCGGCCTCCGGCCCGCCT.gg                                                 >  1:1552921/7‑101 (MQ=17)


                                                     cGTGACCGCCCAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGGGCCGGCCTCTGCTGCGCCC.gg                                                 >  2:1503253/1‑101 (MQ=255)


                                                       tgcccgccgAGGGCCCAAGGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.gggg                                               <  1:3794961/98‑1 (MQ=255)


                                                       ggcccgccgGGGGCCAAAAGCCCCTCGGCCGGCCCCCCCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.gggg                                               <  1:3688509/98‑1 (MQ=14)


                                                       ggcccgccgAGGGCCCAACGCCCCTCGCCCGGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.gggg                                               <  2:5531164/98‑1 (MQ=14)


                                                        gACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.ggggg                                              >  2:3512495/1‑100 (MQ=255)


                                                         cccgccgGGGGCCCAAGGGCCCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGaa                                             <  2:4358011/100‑1 (MQ=255)


                                                          cggccgGGGGCCAAAGGGCCCTCGGCCAGCGCCCCCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGaaa                                            <  2:5863165/99‑1 (MQ=14)


                                                          ccgccgGGGCCCCAAGGGCCCTCGGCCGGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGaaa                                            <  1:4529383/101‑1 (MQ=14)


                                                          ccgccgAGGGCCAAAGGGCCCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGaaa                                            <  1:6655321/101‑1 (MQ=255)


                                                            cccgGGGCCCCAAGGGCCCCCGCCCGGCCCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACg                                          <  1:2016444/100‑1 (MQ=14)


                                                             ccgAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCCCTGCTGCGCCT.GGGGGAACgg                                         >  1:1027589/1‑101 (MQ=255)


                                                              cgAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGt                                        >  1:3105435/1‑101 (MQ=255)


                                                               gAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGAACgggc                                       >  1:4603346/1‑99 (MQ=255)


                                                                ggggCCCAAGGGCCCGCGCCCGGCGCCCCCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCt                                      <  2:1927966/100‑1 (MQ=17)


                                                                 gcccacAACGGCCCCCGGCCGGCGCCCGCCCCGCCCCTGGCGGGCG.TT.TCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCt                                      <  1:2209889/96‑1 (MQ=11)


                                                                  gccccAAGGGCCCTCGGCCGGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTg                                    <  1:5238787/99‑1 (MQ=255)


                                                                      cAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGGG.CT.TCGCTTCCTCCGGTGCGGGGGGCCGCCCTTGGTCCGCCT.GGGGGAACGGTTttcgttc                                >  2:2710556/1‑96 (MQ=9)


                                                                      cAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.CGGGAAACGGTCTTGGCAc                                >  1:2514093/1‑101 (MQ=255)


                                                                        agggCCCTCGGCGAGCCCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCg                              <  2:4013462/99‑1 (MQ=255)


                                                                        aaGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGAACGGTCTTGGCACCg                              >  2:1237175/1‑101 (MQ=255)


                                                                        aaGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGAACGGGCTTGGCAccc                              >  1:468777/1‑100 (MQ=255)


                                                                         aGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGGCCCTGCTGCGCCT.GGGGAAACGGGCTTGGCACCGc                             >  1:5159385/1‑101 (MQ=255)


                                                                          ggCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGAACGGTCTTGGCACCGcc                            >  2:1048862/1‑101 (MQ=255)


                                                                          ggCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCCCTGCTGCGCCC.GGGGAAACGGGCTTGGCACCGcc                            >  2:6993727/1‑101 (MQ=255)


                                                                          ggCCCCCGCCCAGCCCCCGCCCCGCCCAGGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGcc                            <  2:6463748/101‑1 (MQ=18)


                                                                            cccCCGGCCAGCGCCCGCCCCGCCCAGGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCg                          <  1:560781/101‑1 (MQ=255)


                                                                              cTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCcgg                        >  2:2995587/1‑101 (MQ=255)


                                                                               ccgcccgcccccccccccgcCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGc                       <  1:1910924/91‑1 (MQ=18)


                                                                                cGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGGGACGGTCCTGGCACCCCCCCGGcc                      >  2:2888433/1‑100 (MQ=17)


                                                                                  gcgggcgcCCGCCCCGCCCAGGGCGTGCG.CT.TCTCGCCCGCCGGGGGGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTcc                    <  2:5576212/97‑1 (MQ=18)


                                                                                  gccgccccccgccccgcCCGTGGCGGCCT.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTcc                    <  2:2327992/94‑1 (MQ=18)


                                                                                  gCCCGCCCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTcc                    <  2:3723267/101‑1 (MQ=255)


                                                                                   ccggcgcCCGCCCCGCCCATGGGGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCcg                   <  1:5513856/98‑1 (MQ=255)


                                                                                   ccAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCcg                   >  1:1808540/1‑101 (MQ=255)


                                                                                     aGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCCCCGCCCGGGCTCcggc                 >  2:5088435/1‑101 (MQ=255)


                                                                                       cgcccgccCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCCGGCTCcggcgg               >  1:3303185/1‑101 (MQ=255)


                                                                                        gcccgcccCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCCCCCGGGCTCCggccgg              >  1:6227555/1‑101 (MQ=255)


                                                                                         cccgccccgcCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCggcgggc             >  1:5975307/1‑101 (MQ=255)


                                                                                         cccgccccgcCCATGGCGGGCG.CT.TCCCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCggcgggc             <  2:2200187/101‑1 (MQ=255)


                                                                                          ccgccccgccCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCggcgggcg            >  1:2723125/1‑101 (MQ=255)


                                                                                            gccccgcccATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCggcgggcgcg          >  2:1907260/1‑99 (MQ=255)


                                                                                              cccgcccATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGa        >  1:2656226/1‑101 (MQ=255)


                                                                                               ccgcccATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGaa       <  2:5159125/101‑1 (MQ=255)


                                                                                                cgcccAGGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGaaa      <  2:6701911/101‑1 (MQ=255)


ACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCG.CT.TCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCCT.GGGGAAACGGTCTTGGCACCGCCCGGGCTCCGGCGGGCGGGGAAAGGCA  >  NC_014034/3068078‑3068278

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 22 ≤


ATCG

< 31 ≤


ATCG

< 40 ≤


ATCG