| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,439,793 | G→C | 5.2% | intergenic (‑96/+67) | RCAP_rcc03240 ← / ← mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,439,793 | 0 | G→C | 5.2% | 17.6 ‑1.4 0.0 | 241 | intergenic (‑96/+67) | RCAP_rcc03240/mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Reads supporting (aligned to +/- strand): new base (4/9): ref base (115/111): total (121/120) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.53e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 312 total aligned reads displayed.
CTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGA > NC_014034/3439693‑3439894
|
cTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGGAAGAG.AAAagg > 1:1708139/1‑101 (MQ=39)
aTGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGCGATTGGGGGCAA.AT.AAAGGGgct > 1:1067935/1‑101 (MQ=255)
aTGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTTGGGGGAGAG.AAAgggggt > 1:6548991/1‑99 (MQ=255)
aTGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGgct < 2:5107256/101‑1 (MQ=255)
aTGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGgct < 1:2247444/101‑1 (MQ=255)
ggcggcGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGgcttt < 2:5372759/101‑1 (MQ=255)
cggcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCCAGGT.AAAGGGggtttgc > 1:3806375/1‑101 (MQ=255)
ggcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGGCAGAT.AAAGGGgctttgc.t > 2:6385392/1‑101 (MQ=255)
ggcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGCAAGAT.AAAGGGgctttgc.t > 1:3264437/1‑101 (MQ=255)
ggcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGAATTTGGGGAAGAA.AAAAGGgggttgc.t > 2:6232889/1‑101 (MQ=255)
gcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGgctttgc.tt < 1:298368/101‑1 (MQ=255)
gcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGgctttgc.tt < 2:1039143/101‑1 (MQ=255)
gcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGgctttgc.tt < 2:2128981/101‑1 (MQ=255)
cgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGgctttgc.ttt < 1:1870942/101‑1 (MQ=255)
gACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTGGGGGGAGAG.AAAAGGGGTTTGC.tttt > 2:4502665/1‑101 (MQ=255)
gACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGGAAGAT.AAAGGGGCTTTTC.tttt > 1:886000/1‑101 (MQ=255)
cccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTTGGGGAAGAT.AAAAGGGCTTTGC.tttttt > 2:2841439/1‑99 (MQ=255)
cccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTTGGGCAAGATAAAAGGGGGTTTGT.ttttt > 1:1618485/1‑100 (MQ=255)
cccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTAt < 1:7036369/101‑1 (MQ=255)
cccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTAt < 1:4102175/101‑1 (MQ=255)
accTGCACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTAt < 2:1858758/100‑1 (MQ=255)
cTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTGGGGCAAGAG.AAAGGGGGTTTGC.TTTTAttt > 1:1909414/1‑99 (MQ=39)
cTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTagat > 1:116295/1‑98 (MQ=255)
tACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.t.t < 1:5911957/101‑1 (MQ=255)
acacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGGATTTGGGGGAAGAT.AAAAGGGGGTTGC.TTTTTTT.t.tt > 1:6348841/1‑101 (MQ=255)
acacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.t.tt < 2:1168681/101‑1 (MQ=255)
cacGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTc < 2:5439453/101‑1 (MQ=255)
acGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGGAAGAA.AAAAGGGGTTTTC.TTTTTTT.t.tttc > 1:2716896/1‑99 (MQ=37)
acGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTcc < 2:3069714/101‑1 (MQ=255)
ggCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTcccc < 2:3505286/101‑1 (MQ=255)
ggCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTcccc < 2:2773400/101‑1 (MQ=255)
ggCGCAACCAGCTTGCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTcccc < 2:2609785/101‑1 (MQ=255)
gcgcGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGAATTTTGGGGAAGAT.AAAAGGGGTTTGC.TTTTTTT.T.TTccccc > 1:2001622/1‑100 (MQ=255)
gcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCaaa < 1:372520/101‑1 (MQ=255)
cgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAat < 2:4677933/101‑1 (MQ=255)
gACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGGAAGAT.AAAAGGGCTTTGC.TTTTTTCTT.TTCCCCaaaa > 1:5292946/1‑100 (MQ=38)
gACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGGAAGAT.AAAGGGGCGTTGG.TGTTATC.T.TTCCCCCAata > 1:3168713/1‑101 (MQ=38)
aCCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAatat < 1:3879407/101‑1 (MQ=255)
cAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGCAAGAT.AAAGGGGCGTTGC.TTTTTTT.T.TTTCCCAAATATcc > 1:2877760/1‑101 (MQ=38)
ttCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTTGGGGAAGAT.AAAGGGGGTTTGC.TTTTTTT.T.TTTCCCCAAAATCCCgggg > 1:6121268/1‑101 (MQ=255)
ttCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCgggg < 2:2904432/101‑1 (MQ=255)
ttCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCgggg < 1:5534737/101‑1 (MQ=255)
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTTGGGGAAGAT.AAAGGGGCTTTGC.TTTTTTT.T.TTTCCCAAATATCCCgggggg > 1:6708010/1‑100 (MQ=255)
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGGTTTGC.TTTTATC.T.TTTCCCCAATATCCCgggggg > 2:4454851/1‑100 (MQ=255)
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGt < 2:4095593/101‑1 (MQ=255)
aaaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGc < 2:6981681/101‑1 (MQ=255)
aaaGACAGGAATTCGGCCTGCGGCCGATGCCTCAGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTAC.TTTTATC.T.TTCCCCAAATATCCCcggggggg > 2:5247767/1‑98 (MQ=37)
aaaGACAGGAATTCGGCCTGAGGCCGATGCCTCCGGC.GGGGGTATTTGGGGCAAGAT.AAAAGGGGTTTGCTTTTTTTT.T.TTCCCCAAAAATCCGggggggg > 1:6384628/1‑99 (MQ=25)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..g < 1:3082657/101‑1 (MQ=255)
aGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGAATTTGGGGGAAAAT.AAAGGGGCTTTGG.TTTTTTC.T.TTCCCCCCAAATCCCgggggggggg > 1:1255659/1‑96 (MQ=255)
aCAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGGAAGAT.AAAGGGGGTTTGC.TTTTATT.T.TTTCCCAAATATCCCGGGGGTGC..gggg > 2:5616182/1‑101 (MQ=37)
aCAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTTTC.T.TTCCCCCAATATCCCGGGGGTGC..gggg > 2:3646884/1‑101 (MQ=255)
aGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTTTC.T.TTCCCCCAATATCCCCGGGGGGC..GGGGGc > 1:1124096/1‑101 (MQ=37)
aGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGc < 1:6233208/101‑1 (MQ=255)
ggAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTTGGGCAAGAT.AAAGGGGGTTTGC.TTTTATC.T.TTCCCCCAATATCCCGGGGGGGG..ggggggg > 1:679386/1‑99 (MQ=37)
gAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTTGGGGAAGAT.AAAGGGGGTTTGC.TTTTATC.T.TTTCCCCAATATCCCCGGGGTGC..GGGGGGag > 2:5927015/1‑101 (MQ=255)
cGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTTGGGGAAGAT.AAAGGGGGTTTGC.TTTTATC.T.TTCCCCAAATATTCCGGGGGGGC..GGGGGCAGAGg.cc > 2:645105/1‑101 (MQ=37)
cGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTTGGGGAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGc.cc > 2:76352/1‑101 (MQ=255)
cGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGc.cc < 1:259569/101‑1 (MQ=255)
cGGCCCGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGc.cc < 1:3434829/101‑1 (MQ=255)
ggCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGc.ccc < 2:1296618/101‑1 (MQ=255)
gtgactttcGATGCCTCCGGC.GGGGGTATTTTGGGCAAGAT.GAA.ACCCATCCC.CTTCATC.T.TTCCCCCAAAATCCCGGGGGGCCCGGGGGGCAGCGc.cccc > 1:2695008/9‑101 (MQ=25)
ccTGCGGCCGATGCCGCCGGC.GGGGATATCTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCCcg < 1:4502904/101‑1 (MQ=255)
tgactttcGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.GAA.ACCCATCCC.TTTCATC.T.TGCCCCAAATATCCCGGGGGGCCCGGGGGGCAGCGc.ccccc < 2:5759785/94‑2 (MQ=25)
gactttcGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.GAA.ACCCATCCC.TTTCATC.T.TGCCCCAAATATCCCGGGGGGCCCGGGGGGCAGCGc.cccccc > 2:2715433/7‑99 (MQ=25)
ctttcGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.GAA.ACCCATCCC.TTTCATC.T.TGCCCCAAATATCCCGGGGGGCCCGGGGGGCAGCGc.cccccgcc < 1:5462351/97‑5 (MQ=25)
cGGCCGATGCCTCCGGC.GGGGATATTTGGGGCCAGAT.AAAGGGGCTTTGG.TTTTATC.T.TTTCCCCAATATCCCGGGGGTGG..GGGGGCCGAGG.CCCcgccgc > 2:1787442/1‑98 (MQ=37)
tttcGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.GAA.ACCCATCCC.TTTCATC.T.TGCCCCAAATATCCCGGGGGGCCCGGGGGGCAGCGc.cccccgcca < 1:3044469/98‑6 (MQ=25)
ggCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGTGCAGAGC.CCCcgccgcc < 2:5988698/101‑5 (MQ=255)
ttcGATGCCTCCGGC.GGGGATATTTTGGGCAAGAT.GAA.ACCCATCCC.TTTCATC.T.TTCCCCCAATATCCCGGGGGGCC..CGGGGGGGAGCGCCCCCcgcccc > 1:4343352/3‑99 (MQ=21)
tGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGGGC..GGGGGCAGAGG.CCC..CGCCGCCACGGtt > 2:2214242/1‑101 (MQ=18)
ccccggggggggTTGTTGGGGACAAGAT.AAGGGGGTTTTTT.TTTTTTC...TTCCCCAAAT.TACCGGGGGGGG..GGGGGGGCAGC.CCCCCCGCCGCCACGGTTCa < 2:6556221/93‑1 (MQ=255)
cggggggggTTTTTTGGGGAAAGAA.AAAGGGG.TTTTT.TTTTTTC.TCTTCCCCAAA.ATCCCCGGGGGGG..GGGGGGGCAGC.CCCCCCGCCGCCACGGTTCAcg < 2:1708078/96‑1 (MQ=255)
gggggggGTTTTGGGGGAAAAAA.AAAGGGTGTTTTT.TTTTTTT.C.TCCCCCAAATTCCCCGGGGGGGG..GGGGGC.CACC.CCCCCCGCCGCCACGGTTCAcgcc < 1:2099666/98‑1 (MQ=255)
gggATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGAc > 1:4134508/1‑101 (MQ=255)
gggATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGAc > 2:42871/1‑101 (MQ=255)
ggATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGAcc > 2:4777677/1‑101 (MQ=255)
gATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCg > 2:3332655/1‑101 (MQ=255)
gATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGCTCACGCCGCGACCg > 2:439511/1‑101 (MQ=255)
tatTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGtc > 2:7077351/1‑101 (MQ=255)
tatTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGtc > 1:585913/1‑101 (MQ=255)
atTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGtct > 2:1452312/1‑101 (MQ=255)
ttGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTcc > 2:414687/1‑101 (MQ=255)
tGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCg > 1:799538/1‑101 (MQ=255)
tGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCCTCTCCg > 2:1943699/1‑101 (MQ=255)
aGAT.AAAGGGTCTTTGC.TTTTATC.T.TCCCCAAAATACCCCGGGGGTGC..GGGGGCAGA.C.CCCC.CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGc < 1:4405892/101‑1 (MQ=25)
aGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGc > 1:2785758/1‑101 (MQ=255)
gAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc > 1:1366587/1‑101 (MQ=255)
gAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc > 2:1122311/1‑101 (MQ=255)
gAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc > 2:1595707/1‑101 (MQ=255)
aT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 1:4796971/1‑101 (MQ=255)
aT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 1:1536312/1‑101 (MQ=255)
aT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 1:4204189/1‑101 (MQ=255)
aT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 2:3785849/1‑101 (MQ=255)
t.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAg > 1:628374/1‑101 (MQ=255)
aaaGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgc > 1:250897/1‑101 (MQ=255)
aaGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcg > 2:1428373/1‑101 (MQ=255)
aGGTGCTTTGC.TTTTATC.T.TTCCCCAAATATCCGGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcgc > 1:5020564/1‑101 (MQ=37)
ggggCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGcgcg > 1:4621381/1‑101 (MQ=255)
gggCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGcga > 2:681900/1‑101 (MQ=255)
|
CTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGAT.AAAGGGGCTTTGC.TTTTATC.T.TTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGC.CCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGA > NC_014034/3439693‑3439894
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 27 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|